Gene
Gene Model ID | aug_v2a.00210 |
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Locus | scaf95 : 19616 ... 26820 : + |
To GenomeBrowser | scaf95:19616..26820 |
Genes list of scaffold | scaf95 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-20 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.00210.t1 |
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Definition | - |
>aug_v2a.00210.t1 gttcactcagtttcctcttagtcacggtagctgcgaatcaacccatcaattgatcgcccatttattttcactgagaatca gtttgagcaacaggtgagtactaggttagacttctataaacaccaggcacttgcaattattaaatgttctgcaaacggac taaattatttgtcctttctaaataagatgtagcttcgggttgcgatcatagttgataactacgttgcaatcaccttttca ggaaaattggttacaaatacaacactttgtaaagtaaatagttaaacagttttcaagtcaacttttgcaaaatactagcc gttattcttaagctaagccgccaaatcaccttttatgaaaagtttttcagtgcggacgctttgaaaaatctgccaaataa tcctaagccaacgccctcggattattttgtgttgccccgtattcatgaaaccggtcctatttaaatgctttcgattcctg ttatttcgcctttgtatatcgttattctaaataatgtgtgttatggtatcatggaaaattgcttttaaacggtaagcggt tcctctcatgggtctaaatcagcaattctctcaaaatctcggtttgcttattttcgctttgaaacgtaatgttcaattca ttttacattgaggtttaattcggcattagtcagtgtcaccaatcgtgcttttctactggagctctactctcgtgttcgaa aatcgcgtacttatataaatcaacattgcactctgagcccttcttaatcctttattactgaactctcagtgagatcacca aacgaaaataaaataatactttatacaaatccacggtgctaattttagagagattaatagttctggtctgccgtttgcca ttattcacttataatttattttcggaaataagaggctctttgactaagaaacactgtctctaacatcttaaatgagagga cagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaatacgtgctgaaaattcttttagataagt tcaacacacacgcgtgcgttataacttaagtcatcaaaggccgtttaaagagaattactgcaatatatatgtaggtaaaa aaacattttatcaacttttttacgccgaagagagaaaacactctaagcttcgacaatttttgccagtagtttcgcgtcgt tagttttgccagtacctcgctcaaaatagtgtttttaaaacaaccatgagttacttgaatgataaggtagatagaatctt agccagtcttcaatgtatgccctatccattcagcaaatgaaaggacccaatctattttgcttcattacactgttttcagc aaacatgagacagaaaaaaaaacaatagaaaacgaaatggctgaacacctgacaaaacaaatagaaaaccttttttcaag gattgctttgttgcttcttttgatttggtttcgtcgtcttctttccgttttgtcgaattctctcttcatatcgaccgtca ttcaaaataatccattgctgttttaaaagaattgtgatctaaggaaatatcatataagatcattttatcaaacttttacg ccgaagagataaaataatctaagcttggacaattttatacttggtagtttcgcgtcgctagttttttgaacacatcaaaa ggttttcacctttcgttacttgccgcacacacaaccactagttttctaaacgacttgacttgaacgacattccttatcct gcgttgttagacccggacggagcccctccgagacgaagctcattaccccgcgaaacggcaatggatcgaagtacagtttt cccgcccaaggactggagtgtttacaaacaggccatacgcataaataacgacatagaggggtggcataaatataatgctt tcaatagacgcgctggtggacagagtgctttgctgctttacttactcatcactttaactgttggagagggaggtccgact gacaaccatcaccattaggctattttcaagtgagaaactcctcaggagaattatagtgcaagctttatagaactgtttaa aggaagctgttcggtttctagtctccttgcagccgttattagagtcgtcacgcaatgctcctccccaactaacggctgaa aggaatgcagagctcgagtgagcagccgttagtggagaggagcgttacgtgacgaccctaataacggctgcgaaggagac tattcggtttctggccacagtacgaaggacgcgaaataatcggtgcatatttccctaagtcgtgttcacaacgaaatgga tcagttcgtgcacaatgatttgcaagtagatttagcttttaaggccacttgtaatcatctgcaactagacttgtttacta acaatatgccttgtaactttaaggaccagctgatctttggtattattaaactttctacatcgacttagggaaagattgta atagaaataaaagattgattgacgttgacatgatttgagtgctctggtactgcgtttgagttttcataatcaagaaggcg acgtagttttgtcccacaattctaaagcgttggctttgcacccaataaataaacattaagaacaaagtccaaatggtgat atattcttcatattgctcatggtcaagcaaaagagatattacgcaatataattcagtatgaaagaatggcattagcgaac tgaccttgccaataagttagcgaaaccattttagacaacattggcgaaagcttggatatgttttctttaccagtagtttt ggcgccattagcttggttagcacctcaaaatgatgttgaccttttgttacgtgacacgcacacaaccgcgactacgtcgc tcgtagaggagcataaaaagacgacttggggcaagtctacctgaacgattgccctctggtataaaatcagataacatgca cacatctctcctaaaacgtcgataaaaaaaatcatatttaattaatcgtttctcactaactaatatgtaaataggctcgt gaacttaaatgacctgcatctcattaaagcccggtgaacatctgtcccaagaaccggtttaaccatccctctttcacctt ttaaacctacgtgacgttaatctcaaaaccctcgtcctgaaatacctaggctcaaaatctagtctttcttctctaagtac ctagcttttggctcaaaattagctccaggtcattaatatgtttcgctttgaccaatatccattagtgtcatcccatacaa gtaaaaaggaagcatcatttaggtgattgttaggtttaaaatgtttagcatacacaatatagtcatgaaagcatccagga atctaaattgctgccattaacacataaaataaatctctccgatggagaaccagcattgaaaggatgagaacatgaaatca attgacaactgctcctctagcttaaaaatgtttctccggctaaaaagcgtatcatttctttgtttgttgcactaactcat tgctcatttacttatacttacagcaaaacacaatggattgcaaagtcagagatgataaagtctacacgaataatagaagg cttggctatcaaaaagcaattgagtatcatgaaaaatatttgaaaattacaaaagaaatccgtgatcgggcgggagaaag actagcctatgaaaatctcggtaatgcttaccagtcactgggtgactatcannnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnncctatggaagtctcggtaatgcttaccagtcactgggtcactatcaaaaagctat tgagtattatgaaaaatatttgaaaaatacaaaagaaatcggtaatcgggccggagaaggaggagcctatggaaatctcg gtaatgcttaccggttactgagtgactatcaaaaagccattgagtatcatgaagaccatttgaaaattgcaaaagaaatc gatgatcgggccggaaaaggacgagcctatggaaatctcggtaatgcttaccagtttttgggtgactatcaaaaagccat tgagtatcataaaaaccatctaaaaatttcaaaagaaatcgatgatcgggccggagaagggaaaggctatggatacctcg gtaatgcttaccagtcactgggtgactatcaaaaagccattgtgtatcatgaaaagggtttcaaaattgcaaaagaagtc ggtgatcgggccggagaaggagcagcctatggaagtctcggtaatgcttaccagtcactgggtgacaataaaaaagccat tgagtatcaggaaaaatatttgaaaaatacaaaagaaattggtgatcgagccctagaaggaaacgcttatcacaacactg gaagggcatattcttctcttcaacaattcgaaagcgcagcagataattttaattatgctgtggaaacttttaattctatg agatcttgcttgaagtcaaaagatgtttggaaaataagctttcgtgtgctctaccaggaggcgtacactggcttatgggt gtcgttgcttagtattggaaagttcgacgaggcattgtttgcggttgatcaaggacgagctcagactttgtctgacaact tgctgactcaatacagcctacctgcgtcctcgctaccaactgacatcaaagagacaatatctcgcctctttactgagctt tcgacaccagctatttttctagtaattgaaggacctgcgatcatcatgtggtttctgagaaggggaaagaaaattgcatt tcgacaagggaggctagagggtgatagaagagacaaagatccaatacgggtctcactagagacagccattaaaaacattg aagctgaagttaatgtaagatgtgaagatcgcacatttggagagctcgaaaacgaatacccgtctatcagaaaggtgccg cgtgaaaaagtggaaaacccagcattaccgtcctcagacaatccttttaagtcattttatgatgcagttatactaccaat tgttgacttgcttgaacctcaagacgacgagttggtcattgttcccgatggagcgctgtgccttaccccatggttcgcag taattcaatcgattaggattcgcattgttccatcacttacaagttatcacttgatcgtaagtgtacccgaaagccatcac aagaagacaggggcgcttttggtagggaatccgtgcttaaagcagttaaagaaagcagaaccagacttaccatgtgctca aaaggaagtagaaatgattgcatcaattcttaataccaggcccttaactgggaaagaggcaacaaaagctaaagtgataa agcaaatgtcttcggttggtttaattcatattgctgcccacggaaacgagaaaactggagaaatcgccttgtctccaaac ccgggatggacttccgagttccctcaaaaaaaggatttcctcttgacaatgtccgatgtacaagcggccaatcttcgagc tcgtcttgtggtgctaagttgctgtcacagtggacgaggaagaatttcgaagggtgagggtatggtcggtatcgcacgtg cctttttggcagctggttcgcgttctgtgttggtgacgctgtgggcgatagatgacgaagctaccatggtgttcatgaaa aaattgtacgaacacctgaaggaaggaaaaacggccggtgctgctgttcaccattcgatgaaatcccttcgtgaatctga gaagttttctgagatgaggtactgggctccattccaacttatcggagatgacgtcaagattgaattcgacgcggatgatg acatcaaaaaataagagaaacatcaatttttcgttctgttttgtttttttctgttcttttttcaccagaatacccagaaa aatggatttttctgactgtttcacatgtggattatgccgggaaacaagccagtttccctgaagactctggatccttttcg cttta |
Protein
Protein ID | aug_v2a.00210.t1 |
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Definition | - |
>aug_v2a.00210.t1 MDCKVRDDKVYTNNRRLGYQKAIEYHEKYLKITKEIRDRAGERLAYENLGNAYQSLEIGNRAGEGGAYGNLGNAYRLLSD YQKAIEYHEDHLKIAKEIDDRAGKGRAYGNLGNAYQFLGDYQKAIEYHKNHLKISKEIDDRAGEGKGYGYLGNAYQSLGD YQKAIVYHEKGFKIAKEVGDRAGEGAAYGSLGNAYQSLGDNKKAIEYQEKYLKNTKEIGDRALEGNAYHNTGRAYSSLQQ FESAADNFNYAVETFNSMRSCLKSKDVWKISFRVLYQEAYTGLWVSLLSIGKFDEALFAVDQGRAQTLSDNLLTQYSLPA SSLPTDIKETISRLFTELSTPAIFLVIEGPAIIMWFLRRGKKIAFRQGRLEGDRRDKDPIRVSLETAIKNIEAEVNVRCE DRTFGELENEYPSIRKVPREKVENPALPSSDNPFKSFYDAVILPIVDLLEPQDDELVIVPDGALCLTPWFAVIQSIRIRI VPSLTSYHLIVSVPESHHKKTGALLVGNPCLKQLKKAEPDLPCAQKEVEMIASILNTRPLTGKEATKAKVIKQMSSVGLI HIAAHGNEKTGEIALSPNPGWTSEFPQKKDFLLTMSDVQAANLRARLVVLSCCHSGRGRISKGEGMVGIARAFLAAGSRS VLVTLWAIDDEATMVFMKKLYEHLKEGKTAGAAVHHSMKSLRESEKFSEMRYWAPFQLIGDDVKIEFDADDDIKK* |