Gene
Gene Model ID | aug_v2a.00446 |
---|---|
Locus | scaf193 : 102629 ... 105355 : - |
To GenomeBrowser | scaf193:102629..105355 |
Genes list of scaffold | scaf193 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 1-6 |
Description | DAN sequence of this gene model showed similarity with that of Adi-Retrovirus-related 1. This gene model contains RVT_1 domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00446.t1 | gi|339257752|ref|XP_003369062.1| | zinc knuckle protein [Trichinella spiralis] | 0.0 |
Transcript
Transcript ID | aug_v2a.00446.t1 |
---|---|
Definition | - |
>aug_v2a.00446.t1 gcaccagcgtgtttcatgagggccatgcatcttgtcttaaaaggtttgtgctggtcagactgtctagtgtatctagatga catcattgtctttggccgaaccctacaggagcagagagagagactgtcactggttttgtcgcgtttgtctgaagcaggct tgaagatgaaccctaagaaatgcaaactcttgtcagaacgagtgattgtgctcggtcatgtggtgacccgggatggcatt tctattgatccagagaaagcgagagtcattaaagagtggctagtgccagaggatgcaaggcaactgaaggcattcttggg aacagccagttactaccgacaatttgtgccaaactatgctgccattgctgcccctttacaccgtgcttctcaaaagggtg gacgttttagatggacggtgcaatgtgaagaagcctttgcgagcattaagcggaagctgacgaatgcccccatccttgct tttcctcagttggatgagccatttattttagacagtgatgccagcgacaagggcttaggggcagtgttatctcaggttca ggatgggaacgagcgcgttatagcttatgcggcatgtgcactttctaaggccgaaggaaactacagcacgacccggaagg aactcctagcccttgtctggggagcagaacactttgagacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnntggtccttgtgctcaagttaatgacccaagcaagtttcctagagaggggtgcagagtt atcctgattatgttgttcagcagaagaagcaactggaagaaacagagcacctagtgagagagaacctcaagcgggcacag agaactcagaaagcttactacgacatcaggtgccatggtcaacggtttcatgtaggagaccgagtctggtatcgaaaccg agctaggacagggaggaagaaattccttaagccttggtgtggtccttggaagattgtgaaagccctgtctgaggttacgt atcatattgaagaggagaggaggaaagcggggcagcgacgcaacaaaaaggtggtccatttcaattacctgaaaccatgt tttacaccgccgccagtccatgagaaacgtccccaagcaaacacttccagagaagcggctctatcagagccgagagatgt gctacagccaacccaggaaggggctgatgattctagcggggtcgaattggaatggctggaggatcctgttgttctgacca cagagggccatgtaacgccttgggttcagggagcaagtgctaccctcgatccggatgcacaatcctcggaagttcctgac ccgctggaggtcccttcagtgaacaatgaaccaagtcaaattccagttagaccgagacgtgaacgaagggagccctcgtg gctccaggactatgttagaacagttgttgtttatcctacgcggccttttactcttgttggaacaattgcttattaacttt tcaataacttaagctctaacctctgacttatttgggagggggtagtgtagcgtagggcctgaggccgacttagttcggac atgcgctgtggcccagtgtaaaacgtgcttgtagtagatttgcaagttgtgttcgtgtctgatgacagataaagcgtttt tgagaat |
Protein
Protein ID | aug_v2a.00446.t1 |
---|---|
Definition | - |
>aug_v2a.00446.t1 MHLVLKGLCWSDCLVYLDDIIVFGRTLQEQRERLSLVLSRLSEAGLKMNPKKCKLLSERVIVLGHVVTRDGISIDPEKAR VIKEWLVPEDARQLKAFLGTASYYRQFVPNYAAIAAPLHRASQKGGRFRWTVQCEEAFASIKRKLTNAPILAFPQLDEPF ILDSDASDKGLGAVLSQQKKQLEETEHLVRENLKRAQRTQKAYYDIRCHGQRFHVGDRVWYRNRARTGRKKFLKPWCGPW KIVKALSEVTYHIEEERRKAGQRRNKKVVHFNYLKPCFTPPPVHEKRPQANTSREAALSEPRDVLQPTQEGADDSSGVEL EWLEDPVVLTTEGHVTPWVQGASATLDPDAQSSEVPDPLEVPSVNNEPSQIPVRPRRERREPSWLQDYVRTVVVYPTRPF TLVGTIAY* |