Gene
Gene Model ID | aug_v2a.00677 |
---|---|
Locus | scaf291 : 12298 ... 17415 : - |
To GenomeBrowser | scaf291:12298..17415 |
Genes list of scaffold | scaf291 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
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reticulon-3 isoform x3 | GO:0016020 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00677.t1 | gi|156369754|ref|XP_001628139.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.00677.t1 | gi|557779556|ref|XP_005189405.1| | PREDICTED: reticulon-1-A isoform X1 [Musca domestica] | 3.0e-26 |
aug_v2a.00677.t1 | gi|557779560|ref|XP_005189407.1| | PREDICTED: reticulon-1-A isoform X2 [Musca domestica] | 7.0e-26 |
aug_v2a.00677.t1 | gi|602674202|ref|XP_007442594.1| | PREDICTED: reticulon-3 isoform X3 [Python bivittatus] | 2.0e-24 |
aug_v2a.00677.t1 | gi|602674200|ref|XP_007442593.1| | PREDICTED: reticulon-3 isoform X2 [Python bivittatus] | 3.0e-24 |
Transcript
Transcript ID | aug_v2a.00677.t1 |
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Definition | - |
>aug_v2a.00677.t1 tccccaattttttgaatatttaattgcaagtattccagctgctcgttctctatactgtatattttttgccgtcaaagaca tccataataatcctgcctggaatattttgagcgattgaaaccagatccagccaagcctcaaggcgaaattttaaggtgag atttcatagacaaaactgtattttcacttgaaaataatatcaattctgcctcgaatgcggttgtagactgtttttttcta atcgtgttcgcgatcttactgagcgttgaaactaatgttaggtgaaaatttcgccctttttagcgacatagcggagtgca atttatcaatcacgagtcaaattctttttcatacaataacttattcttagggacgatcgaactaaagctcttcgatcgaa attcccgttgaatttttttcacccatcagtttgttttgatgcaaatctttttcagggcgtgatcatgaataatgacaaac tttgccataaaactgaaagcaattttcatttctcttttttttttcactttgttaataacttaatttgaaggtcatatgtt cactttctacaaagatgtcttctgttttattttttcgttcgtttttcccaaattagaacgaattcccacgattccactgt gattatttgaaaacgtatttttcaaagtaaaatgtcagcgctcagtcagctcagtacaaagtaattaagttcttgattaa tttttatagcaatagcttatttctcgatttggggtttcgacgctttaattgttcgcattgttgaatgacgaaattcgcat tgttggtgacgaaaggtcagccatttttaactgtagagctatggttaagggaaagcattttttcaaggttaactgagtca aaaaactaaagttcctggcaacatatgatttagcttaggctttggtgacaacatcgaactgtagtggttgtttttgggtt gactgtgcaggtagctccaacagtaatgggctaatattggtacaacattatgctagatcatctaccttgcctggtcaatg cgctgcagttaagcactactcctagagcaatgccactacaatagttaagctcagcaatgttttatcttgtgggccaataa tgctccaaaaaatgcagcatacaagctagtaccgaatgaaacccattagctaacctattttatcactgattttggccatt ggcattgtgtttaaagctttaatcttttaatttctttcagtgatggatgtcaaagacattttattgtggcgtgacattaa agtgtctgccatcgtatttgtcagcggcttcgtgctactggtctgcctaactcaatttagtgtggtcagcgtcataacaa atatagccctcatctgcctcgctccaatgctggcgttgcgacttttattaactgcaagatcggctgtttcaaaaagcgaa tttgaacatcctctcaagtatgaatatttgatattcatttgcatatcaatagtcgaagtcaccttgtaaagtataaaaat aaacagcaccacaggaacgtactactcagtagctttcatttgattcaggttacacctcgagatttcatccactgactcgc aagttaaaataccctggtacagtaaaataaactgtatttaaatgcagctagccagataattaagttctgttttgaagaaa tcctgctgtggaatttaaatgaaagttttggatcgaaagtactgtcttgtaaaatggttaatacggctaagtttatgaaa ttaacgaattctgcactcttggaataaaaaaatcgctcataaacgcaatgacatcttgagaataatcttgaagatagact acactattgttttttcggagatgtatataaacaaaaaaggaatcaatacaaattctcattatacgtgaagaaggctggta tggaagctaaaataaaacactcagatttaaaatatttcaacgttatatcggttcctgattaaaagatatgagggaccttt agattattggacgaggacgagtacgagtacgaggaagagtacgagatttgacttcccgtttttagcgaaagcttagaaaa tttatgacccggacaattaatcttactcattgttagcagcataagttactcagttatacttattgcttgtaactgagcct ttttgctgatcagaaaatgccaaaactgctatcgtgttcttgacttgttttacgcgacaacatttttacacaacctcgta caaaaatgacgcagttgttttcctcctagaatctaaagctctctgttcactcctcgctacatataacaagattattagat tatttgtctgatcctacgtccaccagcgggattattgtcaacgattgcttgctgaatctgcgaattttgaccatttgttt tttcgctattctttgtagagcctacctatcaaaggacatccaagtacccaaagaaaaggtatgtagatttcctttgtgct tcaaaaagacataaatttactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataagtcaacaaaacgaattcaacagagcttgtgatctgtttcaaattt ttttcaacaactactgatctctccacagctgctggtagtgttgtatattttgtcgtatattgctctgtggttcagtggaa taacgctcagtttcatcggtaagtctttactgtgcaaaaaaaatggtacgccattttacgacgaactgcaaggttttaat ttcatttcatttcgtaccttgaaatgatgagctttttaatgagaaaatgtttgatacggtggttgaaactagttacttta attaactgaaaaacttatcagtggatactttttagtttttctgcttccttagcttcaaattccaaatgcaacaggttttg taactcttcctctttacataagcacgcatttaacactaagataaatttcagtaactgtcatccttgacctcgatggcttg acttcgatggctttacttatcaaactcttaatgcaaatactttttcacacgactttcaagattacttttgtgtgaacata atatgacgtaattcgtaatttctgacattttaacaggattcattggggcttttatcgttccaaagatatatgacatgtac caggtaagtgcattactcatttaccagagtgtttcgtctttcagtcaaacttgaagaccaaaccaaattcaatgtaacaa caaggtaacctgtgcacttgtgtttttagacggagattgattcttgtatgcggaaaataaagagcgccgttgatgaagtg cttcaaaagtaagtatgttaaatcaatctagtttcctcgttaatctgtgatctgttttcaacggcacacaaattttaagt cttgagcgcgagctgggaatgaataacggggtacacccaacccttgtcaatgaagtcataagttataccttttccctctg gtttggcaagtgggcgtgcacaaatcgaggccatactcaaactttgatgaaaacaaaaggcatatgtccgtacaagacac gtaaactgagaacctgcgggcattgtgcgcttgcgtactgaatacaaagttcttcatacctgaagttgctcaaagcgtga atacaacaacttcgtttccaagacctctcccttggcttttcctatcctaactcagaagccaagggataggtcctgggaac gaggttgcccggttacttggactggttatgatcggtgcattgtacaacagttaatcgcaaacgcaatttcatttataaat cattttgtctaggatcactgccaaagtacccgctacaaaacaaaaggaggcttcaacgcctgacagcaaagataacctcg aacacaacgacaacgacaagaagatgtcttaattaagcttaatggtcaagcgtaaaaagccaagtcgctcctttaagaat agatcattattttaattgaagcaacgttgtgttgaggtgactgtgcgatgccaagaagaggaattagctttacacaagaa aaaactatgatgagactatcttggcgaggacagcaatgtattgaaaactagcaattaaaatatatcttttttttgacc |
Protein
Protein ID | aug_v2a.00677.t1 |
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Definition | - |
>aug_v2a.00677.t1 MDVKDILLWRDIKVSAIVFVSGFVLLVCLTQFSVVSVITNIALICLAPMLALRLLLTARSAVSKSEFEHPLKAYLSKDIQ VPKEKLLVVLYILSYIALWFSGITLSFIGFIGAFIVPKIYDMYQTEIDSCMRKIKSAVDEVLQKITAKVPATKQKEASTP DSKDNLEHNDNDKKMS* |