Gene
Gene Model ID | aug_v2a.00933 |
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Locus | scaf380 : 40087 ... 47615 : - |
To GenomeBrowser | scaf380:40087..47615 |
Genes list of scaffold | scaf380 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 26-1 |
Description | This gene model has SCAN, zf-CCHC and RVP domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00933.t1 | gi|512884781|ref|XP_004920303.1| | 0.0 | |
aug_v2a.00933.t1 | gi|512885369|ref|XP_004920375.1| | 0.0 | |
aug_v2a.00933.t1 | gi|512882870|ref|XP_004920015.1| | PREDICTED: uncharacterized protein LOC101731432 [Xenopus (Silurana) tropicalis] | 0.0 |
aug_v2a.00933.t1 | gi|512886514|ref|XP_004920504.1| | PREDICTED: uncharacterized protein LOC100489607 [Xenopus (Silurana) tropicalis] | 0.0 |
aug_v2a.00933.t1 | gi|512873541|ref|XP_004918673.1| | PREDICTED: uncharacterized protein LOC101731501 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
Transcript ID | aug_v2a.00933.t1 |
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Definition | - |
>aug_v2a.00933.t1 gaagtggtgacctaaacttgtatgagaaagttatggcacaagtggcaatagttttcatttgctggagaaggaggcattac gataaatcaaccctgtcctttttgagtgattgtgcataccaatgtaaacatcttccagaacattggtcaaagaaagcaag cattctcaaacttatcactgaaaaaaaggtggaagtctggcactctgtactgcggagaaacaccgagaagtttgacgatg caaagagtattgaagacacagcaaaatcaatatcatcatcaggatttttaaacgatttcatacagtcctttgttcctcaa taccagcgaggtcatgctgaaccaaacttgtggctcatcgctgggaaaacagccgaattcttactggatctgtttcggag tgtttcaaggaactgtcaaaactcacgccaggtaagactcctacgaccaagatatataacaaattattacaatttcatgg tctggattatgcctaaacaaggaaatacgtacaaagctattattaagtgcaacaacaatggtttaaatgactgaacaagg caaatgaacagatggaaatgaatactgacatctgaaaactattcttatcatgttgtatgacaatgagtgtaatacaacat ataattattgtaattttattcaccctattaaataaaaacagaacattaaaatcagcaaattgtagctgggcacacacctg tatattcttttggtgataactatttgttttgtctatgcaggttgaacgtacacttgcaaacaatggaaagccaaaaggaa agccacagtattacctgccaacgtttgacaccatagttgacacaaagtgttttccattaagttataacttatatgacgtg caagctgacctggaacctgacccaaatgtgtattgcgattttccatcatgtacaaggagagatacagataccattgtaag acttgcctgcttccactgtttccatcaaccatgcttgtcttcacatgattgttgcccaatttgtctggttccactgaaga aaaaagtgcaaaaattggctaacacattcaacaatggacttctaacttccaatgagactgatacaattgaaaataatgct gatgttctcaatgaagaacatataagtacaccagcaagcatgagtgtaaccgaagcacaagcattctattcttcaacaga atgggctgtgaagattgacagtaccttaaacagctatgcaccgatccctcttccatcccaacccaaccattcaaccccca accactcttcagttttaactaccccagatgtacctgcctctaacagctctcctcgtgttctcacaccaattattatacca ccacatcacaatgttaatgtcacttactggtcctttccatacattatctctcagtcaacaattcttggaagactaggaag caatgcctgtacgtttatagcccttttgtttagcaaaatgtttttttcacccaatgttgacattcctgtgactgaaagtc cactgagtcagacatgggtgtatcagatagttattcaaggaattttggcagggaacagcatctatgactcactaacagat attcctcaaacatttggtgtgttagaagtgcttcaagcctctacattactcaacaatgccattggctatactacggctgg acctgaattgccagtaagcattgttcctgagagaactgctacagcttccctgcctttctactggagacaagctctggcac aagggcaagcagcctcaatttttattttgagttccaacacagttgctttcattccaaccacacagggggtttttctttta gacagccacctgcatgggaacagtggcgctcatgtcgcctttgcatcatggcagcattcttttgaactactttcttggtt taaggaaattaattactttcagtacactcttggaacagtcaccaatgtgaagttccactagaaagtaaaagtacagctgc acgtgcaagcttaagtatgacaaagcgggtgaaaaacaactgaaatctaagaatgcattattggcacattttgcagctca agttagcacatttaagtcaacatccatgatcaatggcagacgttgacaatcagttcaatttcactttcataatattaact aagcataatttaaaggcaaacgataaaattcgactcataactttggaatttaagtttacgtgtatcttttaagcttagat tttaatagcagttcactgctttcgacttgtcactttcaccgctatttcgtggccttgtttgggaataaaatggtcatttt gctaagtataaaaggcatgacttacgttaaatccactaaaattttaattgcttatcaagttgaagtaaagtctggacatc agacaagcctactcacccggtagcgctgtgagagtcgagcaacgcttcccacgatttgccagctttttagaattgctaag cagccaacattccctcgaaatgagttcgatatgtcagagacttcttgttgaactggattgttctcaaaattcgtcaagtt ccatcttgtcaaaagtggtaatcgccaggaaatcacccgcaataacaacgttgttcaagggtgtaaactttcattgatca aacgatcgaaaatgcgccagaaagagtcaaccacacgcatgcgcagacgtttttcagctctgtcgacagggcttaaaaac ggctggacatgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatatttggtggcagcgtcgggatcaccttgccgaggttttacgtc agtaagcaaggacccacagtggattagaaacaatgaatttcgaagctatggagtacgaaaccagacggaaggagctgaat gcacttacgtttgataagttgaaggaaatgtgtgtagagagacacattgacttcggtggtaagaacaaagcagagttgat tgatcttttgagtgagtttatggagctgaaaagtggcgattcggtgacggaagttacggctccaccggaagtaaacgttc aaattatgaaaatgcttatgcagatgcaggaggtgcagatgagatggctagagcagcagcaaagnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgaatagctaaagaaaaagaactaaaaaggcaagaagaa cgagaaatggaaaaaatggagaaagagcagaggttcctgtcagaactaatgaaagagttagcagattctaaaaaggaaaa ggacgctgtgaagttaccaaaacctgtacttcaaaagtttacagaaggagatgacatcgaaagctttctagatatgttcg agagagtagcttccctccacaaatggccgaagactatttgggcaacacagttagctggtgtattatctggaaaggccctg aaagctttttcatcccttcccactgaaaaatctacgaaatatgaagaagtaaaacatgccattttgcaacgatacaacgt caactctgaaacgtatcgtctgagatttcgaaatgatttttataaacaaggcgaatcacatcatgaatacttcaatcgtt tagaggaacacttccagcgctggacaaagtcgcaagggatggaactcagagacctgataattttggaacaatttcttcaa ggagtgccgactgacctatcagtttggcttaaagaaagaaagcctacatcagctaaagaagccgcacaaatggcagatga ctacatcctagcccgtggaactaagccttcttatgagaagttacacagacctcaaagactacaaagtgaaccctccacaa aagtgatgcaggaaaagcagcaatcatctaagccttttttcagagttcctcccccagaagtacgcaatataccgcctcga agcaaaacgaatactcaaggtgagaaacagtgttacaattgtaagaaatggggacacattgcaacagtttgccctcaaag aacatccacgccaagttttaaagcagatgctaagcctgcttttgtaagtgaatctcgtccacagcgactatgcaacccaa gtaacagcaagtacatacgtgaaggtagggttgagggaaaagacgtaaagatgcttgtcgatactggtagccatacaact attgtgaaagctgatcttgtggaaaacgaaaagtggaatgaaggggaaactatcaacgttatttgtgttcatggagattc agtggactatccaacagcggaagtggatttagagatggatggttgggcgaagaagaccaaagtagctctggtaccagagg taccagttgacgttctgattgggataaaggactttgatttgtcagaagaaatgtcaactcaaccagactgcgcgcacaat cttgccgtaatgacaagatcacagacaagaaaggaggctgaggagcaaagcaaagtggaaggtgctgacaatgtaagact tgctgacaaaaaggaaactgtgaatgatgttacaggacaaacctggaaactgggaaacatacaaaaagagaccataaaac ctgaggaagaaaaacccaaaaccgaaaacgctgcatcagatagtataaatcctgagaatgcaggtcctgagatgatccag aggtggcagtcagaagacccaaccttagagaaagcgagagccttagcaagagagcctaaacagcaggaggaaacaaaatc agaaacaactttctattacagacagggcttgttatatcgccagtgggtaccaaagggcagcgacagtgaagatattagat ctgtggaacagttggtacttcccttacagtgtcgcagcacagttctcaaacttgcacatgatgtacctgcagctggnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacatttgagaaaagtatttacctgtttgaaagatgccaa tttgtcattgaagagttcgaagtgcagatttggctacactcagacacaacacctgggtcacgtgattggagagggcaaga ttctgccagatccaaaaaaggtagaagctgtaaagaactacaagaaaccagagtcgaaatctgaaatccgcgcttttctt ggtcttaccggctattatagacgcttcataccaaactactccagtattgcagcaccacttactgctctaacccagaaagt gaaaccagagaacgtgcaatgggatgaagagaaccagagggcttttgaaaaacttaagaacgcacttacatctggtccag ttttgaaagcaccagaagttgacaagcctttcatagttcaaacagatgcatgtgacttaggcataggagctgttctcagc cagttagatgaggatggtgaagaacgcccagtggcctacgccagcaggaagctgttaccgcgtgagacaagatatgcaac aatcgagaaagagtgtcttgctattgtttgggctttgaagcaatttagaatttatttgtatgggatgccctttgttatag aaactgatcataaaccgctgatctggcttcaaaaaatgaaggatacaaaccaaaggttgacgcgatgggcaattactgtc cagcagtatcaatatgaaataagacaccgacctggagttcaacatggcaatgctgatggcttatcgcggggaccgctatg agcaacttaacggggaaggaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnn |
Protein
Protein ID | aug_v2a.00933.t1 |
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Definition | - |
>aug_v2a.00933.t1 MAQVAIVFICWRRRHYDKSTLSFLSDCAYQCKHLPEHWSKKASILKLITEKKVEVWHSVLRRNTEKFDDAKSIEDTAKSI SSSGFLNDFIQSFVPQYQRGHAEPNLWLIAGKTAEFLLDLFRSVSRNCQNSRQVERTLANNGKPKGKPQYYLPTFDTIVD TKCFPLSYNLYDVQADLEPDPNVYCDFPSCTRRDTDTIVRLACFHCFHQPCLSSHDCCPICLVPLKKKVQKLANTFNNGL LTSNETDTIENNADVLNEEHISTPASMSVTEAQAFYSSTEWAVKIDSTLNSYAPIPLPSQPNHSTPNHSSVLTTPDVPAS NSSPRVLTPIIIPPHHNVNVTYWSFPYIISQSTILGRLGSNACTFIALLFSKMFFSPNVDIPVTESPLSQTWVYQIVIQG ILAGNSIYDSLTDIPQTFGVLEVLQASTLLNNAIGYTTAGPELPWRFGDGSYGSTGSKRSNYENAYADAGGADEMARAAA KXXXXXXXXXXXXXXXXXXXRIAKEKELKRQEEREMEKMEKEQRFLSELMKELADSKKEKDAVKLPKPVLQKFTEGDDIE SFLDMFERVASLHKWPKTIWATQLAGVLSGKALKAFSSLPTEKSTKYEEVKHAILQRYNVNSETYRLRFRNDFYKQGESH HEYFNRLEEHFQRWTKSQGMELRDLIILEQFLQGVPTDLSVWLKERKPTSAKEAAQMADDYILARGTKPSYEKLHRPQRL QSEPSTKVMQEKQQSSKPFFRVPPPEVRNIPPRSKTNTQGEKQCYNCKKWGHIATVCPQRTSTPSFKADAKPAFVSESRP QRLCNPSNSKYIREGRVEGKDVKMLVDTGSHTTIVKADLVENEKWNEGETINVICVHGDSVDYPTAEVDLEMDGWAKKTK VALVPEVPVDVLIGIKDFDLSEEMSTQPDCAHNLAVMTRSQTRKEAEEQSKVEGADNVRLADKKETVNDVTGQTWKLGNI QKETIKPEEEKPKTENAASDSINPENAGPEMIQRWQSEDPTLEKARALAREPKQQEETKSETTFYYRQGLLYRQWVPKGS DSEDIRSVEQLVLPLQCRSTVLKLAHDTQHLGHVIGEGKILPDPKKVEAVKNYKKPESKSEIRAFLGLTGYYRRFIPNYS SIAAPLTALTQKVKPENVQWDEENQRAFEKLKNALTSGPVLKAPEVDKPFIVQTDACDLGIGAVLSQLDEDGEERPVAYA SRKLLPRETRYATIEKECLAIVWALKQFRIYLYGMPFVIETDHKPLIWLQKMKDTNQRLTRWAITVQQYQYEIRHRPGVQ HGNADGLSRGPL* |