Gene
Gene Model ID | aug_v2a.01159 |
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Locus | scaf461 : 18595 ... 26365 : - |
To GenomeBrowser | scaf461:18595..26365 |
Genes list of scaffold | scaf461 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-71 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC, and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.01159.t1 |
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Definition | - |
>aug_v2a.01159.t1 ggcgtgggtggccgggtattctgaagttgctctgctgactctaacactgctacccttcctgcaacaactatggcagccat tgtcagtatgtctgcttctttcagtaccattagggagcttaagcaagagacatttttttagccgtggacagcaactggaa gtgatgtcaaaacaaaagtgatgctaacaatcacagactcccatcaaaactggctttttgccatccatatcaaaactgca aaatacaggaatgcacaaacaataaagtactgtatttttgaagtttttctgtgttttgtggacagatcagtatctactgt aattccattgctctgaaagatgtacagacaagtgtgtgttgcagacaaaaagaagcaaaagaaacaaaaacaaaaaaggg aaaagactagatcctttaaattttattattatannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngt tgaggtagagctatgcgagatagctgattttgttgtaggggttggacccaagctggctgaagcctttcgcaagtacctcg gcttttgtaaaaagcaccaagatgtttttgagttcactcctggtatttttgatgagttttccagtgttcaacaagtccct gatgaaagaaaagaatgcagtgttctagtgtttggtcgtggagatgctgaagattttaagctgaagggatttgacattgc agcaaaatctgttgctgccttgtctgacactattcttgttttcgtgggagcaccccatggaaaacacgaggagattgcca agagtttcattaggtttgggattcctgcagagcgccttagggtgagaagttacgtgggccgagaatctctgaagaagtta ttttgtgaggtggatgttgtgctgatgccatcaaggacagaaggctttggcttgacaggcctagaagctctgtcagctgg gcttcctgtacttgttagcaaaaactccggttttggaaaagctcttggccgcgtaccatgtggctctttatttgtcattg gccatgaagatcccagtgcatgggcagcagccatcaaatgcatctggaacaaagacagaaagtcacgacttgatgaggtt aacactttgcgagatttctatgctaaaagatacagttggtctgaacagtgcaagcatctgatggaaaagatagttgaact tgttgatggtaggaaatacatttagattctactagcttgttgattaaaatgctaatttgaagactccggagtacagtttg atgatgtggaaaaaaaattctgtcaaagatcgacaatgtgcaataattgtacacatgtgggttatggcagtgtttgtaaa gctgtggatgggacaataagaaagttgataaggagtgagcaagctgaccagtatcataaaaaaattatcattatgatgga ctgtcattacagagcccatggggttgatttgtgataggaactctgaagtatgttaagctgttacgtcacctatgtttaag aaaccatggtatcttaaccatctaaaatttcttgcttgaataggaacgtcgtctgagcttgagatcacagcacaagcagt ggaagcaaggaagcggaaaggtatagaaaggaacggttaaaaatttgcagctcatagaagaagtaatatcatactattct cgattgatcatccaaaattaagagaggaaagttaaagtgaggacattggatgactgacttacaatcctagaatgtccagt aacaattttagtgagatacttgtttggtattttttgctaaaaattgtaaagggaataaagattttttagagaaacaagat aggtcatgaacagataaaacttcaagtgattttgttgtgtcaatgttatgtatattcaattttccatattatgaggagat ttgcttgaacaatgtagttatttgtagtttgctagagaaaccattgcatggaaatgagtaacgtatgcagtcatacaaag aagcccagctgaaaaatcagttccacgctcaaatggggctctagcccatgacttgtgagattgtgctgcacactactcta ccttcgatgagatatacagaaggagatcaaatgcaaactaagttttgtgccccacactgagtgagtgtgcacaaatactt tatataagtaccttgtaaaagtcatgcccttatgaatttgaattgagcgatgatctcaccatgcaatatcaaacatttat atctgtaatatttcattaatcatattcgtcctaaaggaagtttcctataaaaaaaatgacagttttttctcttgacaaag acgtacagtaagagatttctggtttttgaagcttgatacatttcataaaacataaacgttttataaacaaattttcagta acataacagcatttcctgtaattattcacaggtgtactgtcatgttatgttctatgcaatatccattttttctataggat aacacattttgtttaacattgtctatagacttttctccacgttttgcacccgaaacgaaaagaggaagaattgaaaagaa tgagagtgagcaggcagcaggtacagtccatgaaatgcagcaataaaattagttgtcagagaaattttaatgattatcat ttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnncttgatctattgaaaaattaaaatcgaatagtttctactatataaataattgcgtctctatgtggaggttaggcgc ctgaggcatcatggagcttccacttttagcgccaactccaagatggagactgtaccgatggctggcaaaaccagataacc cgacccatgagcccctatgccccggagaggacacgaacccgtcacaccgatacacagtggaaagcagagggtagggaagg gagggtaaaaaccgctaaaagctccacacataatgctccttcctctcgccacactgataaataagcgctccaacctaaag cacgtggaactcctttcttaatcacgattttagttagcaagaaggcatgattacttgatgctgatttgttataagttgct tgtcaacgaagcgttattgcggatgattttttttttgcaacaatggcttcccgtttcgtggaagccggcgaaaccttaat tgaggaatgattacttcatgaagccgtcagtaacgttggtaactgaaaaaaatgttcattgaatctactggtcagttacg tttgtttggacactcgtggcggcattgaaagggcttcatcgcgcggacatcgtgcgcgaatgtaattccctcaaaaatgt tgccccttatgtgataaacaagtaatcccaagtgcccacgggcacttaaggattaatttcacttgtgttttcaaagatta catgtactaaacttcgtttaacttcattaacccaattgaccactagtgttctgattggtcaaagatttatggcttattgt acgggtaaactcggacatgtaattactggcaatcacacttcgtatgatgagtggttaaaatttgatcactctattagaat acttggttttataaattgatatctgtttttattccttgtttgttttttgttgcagctcgtgcttcgtgtccaagccacgt catagagggaatacaacaagtataccggaagcgtgaaggggtgattgtgccatttccttggtgtgaaagattcagcttcc agatagagaacattttcaccagacttaggatagttgcaaaagaaaagacacgcggaatagcgaccacaaaagaagtcacc aacatgacaggtattttcacaccacacgattgttgcgaacaaccgctgattgtgttgattgaaggcgaacctggaatggg aaagaccacctattgccaaaagctggtatttgattgggcaagcaaacaatgtcgtgaattggatgagtcttttccaagaa ttgatgtgctcctgttcctcagatgtcgtggaatcaaatctactatctgggacggtattgaagaccaaattctggcagat gaaattaacccggaggaaaaagagatgtttttccaattcttgagagaaaatccctctaaggtgttgcttctgctcgatgg gttagatgaggcagacccgcaaaaactggaaatgtacttgaaacttattcaaaagaagcagcttccttgttgttacattg ttctcacgtctcgccatgaagcggggagtaaagtgaggccgtacaccgacacgttgttagagattgtgggattcaaaaaa gaagatgcaaagtgtttcataagaaagtattttcaagacacgaaagacttggcagaaaaacttatttcaaaagtttatca tgattcttattttgtttttgatgaggatgaggatgaggacgactactttgacaaggacaaggatttaagggaactattaa aaaaccctttaaacactcttctactttgtgttattttcgaggatttagagggaattctaccaaccaacaggacgcagctt tacgtggagattgttctctttattttgagacgttatgaaagcaagaacggcttatcaaatagaggtaaagaacttttatt agtttacaagaaggaactgatgatgctaggagaaagtgcgttagactctctgcgtaaacaacaactgtatttcgatgacc acaaaggggacatcaaggaaagtttgttgatgaagtttggctttctgtcgatccagtctggtgggagcaagagagctcct tgtgaccgttacgggttttttcataagagttttcaagagttctttgcgggttacttccttgctttttctgccattgataa tgttactaactcacactcagtactgaccgatgagagatacgtgaaagaactatctcatgttcttaaattcatgagtggaa tcctagctcagcgatcggaagaagctgcagtatcaattgtagaaagtattgcctcaattgtaagtgagacaggagtcaca tcccctaaggtcgatttttacttacgtgttgcgaacatcgtaattagagagtgcaaaacttgttcagaagacctttacac aaaagtagttcgtacctttggtgagaggcttcagtgggttgacgtggtagtgaggccttcctcctttccatggaacagtg aatttactgaaacgtttctccaggccctcgcctttaactccaccgttttaagcctggacttgatggagtggaagtttaca aatgtgctcactcgggccctcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagagtaaatacctct ctttctttttttgatttgtttagcagttccattggtaatgagggaggaacttcacttgctcaggccctaaaagtaaatac ctctgtttctt |
Protein
Protein ID | aug_v2a.01159.t1 |
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Definition | - |
>aug_v2a.01159.t1 MAAIVRVGPKLAEAFRKYLGFCKKHQDVFEFTPGIFDEFSSVQQVPDERKECSVLVFGRGDAEDFKLKGFDIAAKSVAAL SDTILVFVGAPHGKHEEIAKSFIRFGIPAERLRVRSYVGRESLKKLFCEVDVVLMPSRTEGFGLTGLEALSAGLPVLVSK NSGFGKALGRVPCGSLFVIGHEDPSAWAAAIKCIWNKDRKSRLDEVNTLRDFYAKRYSWSEQCKHLMEKIVELVDGTSSE LEITAQAVEARKRKDFSPRFAPETKRGRIEKNESEQAAARASCPSHVIEGIQQVYRKREGVIVPFPWCERFSFQIENIFT RLRIVAKEKTRGIATTKEVTNMTGIFTPHDCCEQPLIVLIEGEPGMGKTTYCQKLVFDWASKQCRELDESFPRIDVLLFL RCRGIKSTIWDGIEDQILADEINPEEKEMFFQFLRENPSKVLLLLDGLDEADPQKLEMYLKLIQKKQLPCCYIVLTSRHE AGSKVRPYTDTLLEIVGFKKEDAKCFIRKYFQDTKDLAEKLISKVYHDSYFVFDEDEDEDDYFDKDKDLRELLKNPLNTL LLCVIFEDLEGILPTNRTQLYVEIVLFILRRYESKNGLSNRGKELLLVYKKELMMLGESALDSLRKQQLYFDDHKGDIKE SLLMKFGFLSIQSGGSKRAPCDRYGFFHKSFQEFFAGYFLAFSAIDNVTNSHSVLTDERYVKELSHVLKFMSGILAQRSE EAAVSIVESIASIVSETGVTSPKVDFYLRVANIVIRECKTCSEDLYTKVVRTFAVPLVMREELHLLRP* |