Gene
Gene Model ID | aug_v2a.02072 |
---|---|
Locus | scaf701 : 4736 ... 7473 : + |
To GenomeBrowser | scaf701:4736..7473 |
Genes list of scaffold | scaf701 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 130 |
Description | This gene model contains RVT_1, Peptidase_A17 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02072.t1 |
---|---|
Definition | - |
>aug_v2a.02072.t1 ctggaaagattcgtgttgtcttcgactgctcggcaaggttcaaaggaacttccctcaacgatctgttgatgaaggggcca gatcttacaaattccctcctgggtgttctcacaagatttcgccaagatcatgtggctgtaatggcagacattcaggagat gttccatcaggttagagttcctgaatgtgaccgttcatttcttcgcttcttatggtggccgaacggcgatttatcacgtg gattaatagaatatcagatgaccgtgcatctatttggagctgtgtcttcaccagcttgctccaattatgccctccggaaa acaggcaatgataatgcccagcacttctcctgtgatgtggtgaacacaatcaagcggaatttttacgttgatgactgctt gaagtccctcccatcagtcaaggatgctataacgcatgtccgtgagttgtgcagcctcctgcagcggggaggttttcgcc tgacaaagtgggtgagcagtagcggagaggttctggaaagcatccctgttaaagaccgtggtcaagaaatcaagaagcta gaccttcaaagggatgagttaccagttgagcatgcgcttggtgttcaatggaggatagaagatgacacgtttggcttcaa tgttaacctcaaacccaaggcccctacccgtagaggcattctgtctgtcttggggtcagttttcgatccctttggttttg ttgcccccttcgtcctaactggtaagaagattcttcaagacctgtgccggttaaagttgggttgggatgatgaagtgcct gctgaacacggattacgttggcaaagatggctgatggacatccccaagctctctcagttcacgatagaacactgtctcaa accagccgacttcaaaagtaccgtatccagtcagcttgaccatttttctgacgcttcggagattggtttcggatcggtct tgtacttacgactggaagatgactgtggcagaatttactttactatcctgcaaggaaagtcgcgcctcgtacctctgaag caaataacaattcctcgcctggagctgtcggccgcaacagtctcaatccggttggataagattttgaagagagagcttga gttgtcgctaaccgatgagtcaaccttctggacggacagcatgtctgtgttacgttttataaagaatgagagcaagcggt tccacaccttcgtagcgaatcgtatagccgtcatacaggatggatctcacccagaccagttgagacacgtaggcggacat ctaaacccaggtgacgacctctcaacaggcttgtcagcagaagctcttcttaactctgatcgttggataaaggggccggt gtttctctggttgccaaaagagttctggcctcttggtcctctatcgctgggcagtgttcttgatacagatccagaggtga aggtaaaagccaaggttaacgtgacatcagtaacacagtccttatgtcctttgatagagtattttcgtagaacgtcttcc tggtatcgcctcaaaaaatcggttgcttggattctacgctaccgtgagaatttgctgacggctagtcaaggcaagaagcc gataaaatccacgctaactgccccaaaacggcccatcaccgtggaagaaatgaaagcagcggagttagaaattctcaaga gtgttcagaagcaccacttcgccgaagaattttactcacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnntggacgactgagtctagcgtcaaaagcatttgattatcagcaccagatcat tttaccaaggaatgatcatgtagccaacctattggtcgagcactatcatcagatgtccgggcattctggtagagaatacg tgttgagtctcctacgcgagcgtttctgggtcgacaaaggaagttccgcggttaggaaagttttatcgaagtgcacacgt tgtaggcgtcaccaaggccctttgtgcgagcagaaaatggccgatctccccgtggatcgtctaaccgcagatcaaccgcc ctttacgtcagtcggtgttgattattttggcccccttcaagtgcgacgcggacgaagccttctcaaaagatatggagtta tcttcacctgccttgccattcgagctgtgcacattgaagtagcccacagcctagacaccgactcctttctcttagctcta agacgatttatagcaagaagaggtcaggtgaagcaaatacgatcagataacggcacaaatttcactagcggcgaaaagga gctccgcgattccattaacgcctggaataaagagaaaattcgtgagaatatgctgcaaaggaatattgagtggtctttta atgccccactcggctcacattatggcggcgtttgggagcgttgcattcgcacgactagaaagattctacaagccctcctc cgagagcaaatcatcgacgatgaacgcctcacgactttgctaagagaagttgaaagtattatgaacggccgtccaatcac taaagtttccagtgacccgtgggatcaagagccgctgacacccnnnnnnnnnnnnnnnnnnnnnttaataagtatttaac aagtttcaatactttacaaactatcaagtcatgaaaaattctaaaaactaatgtatataagtaaaaataatgtgtatata taaactacaagatacgtt |
Protein
Protein ID | aug_v2a.02072.t1 |
---|---|
Definition | - |
>aug_v2a.02072.t1 MKGPDLTNSLLGVLTRFRQDHVAVMADIQEMFHQVRVPECDRSFLRFLWWPNGDLSRGLIEYQMTVHLFGAVSSPACSNY ALRKTGNDNAQHFSCDVVNTIKRNFYVDDCLKSLPSVKDAITHVRELCSLLQRGGFRLTKWVSSSGEVLESIPVKDRGQE IKKLDLQRDELPVEHALGVQWRIEDDTFGFNVNLKPKAPTRRGILSVLGSVFDPFGFVAPFVLTGKKILQDLCRLKLGWD DEVPAEHGLRWQRWLMDIPKLSQFTIEHCLKPADFKSTVSSQLDHFSDASEIGFGSVLYLRLEDDCGRIYFTILQGKSRL VPLKQITIPRLELSAATVSIRLDKILKRELELSLTDESTFWTDSMSVLRFIKNESKRFHTFVANRIAVIQDGSHPDQLRH VGGHLNPGDDLSTGLSAEALLNSDRWIKGPVFLWLPKEFWPLGPLSLGSVLDTDPEVKVKAKVNVTSVTQSLCPLIEYFR RTSSWYRLKKSVAWILRYRENLLTASQGKKPIKSTLTAPKRPITVEEMKAAELEILKSVQKHHFAEEFYSXXXXXXXXXX XXXXXXXXXXXXXXGRLSLASKAFDYQHQIILPRNDHVANLLVEHYHQMSGHSGREYVLSLLRERFWVDKGSSAVRKVLS KCTRCRRHQGPLCEQKMADLPVDRLTADQPPFTSVGVDYFGPLQVRRGRSLLKRYGVIFTCLAIRAVHIEVAHSLDTDSF LLALRRFIARRGQVKQIRSDNGTNFTSGEKELRDSINAWNKEKIRENMLQRNIEWSFNAPLGSHYGGVWERCIRTTRKIL QALLREQIIDDERLTTLLREVESIMNGRPITKVSSDPWDQEPLTPXXXXXXXLISI* |