Gene
Gene Model ID | aug_v2a.02519 |
---|---|
Locus | scaf816 : 33366 ... 43375 : - |
To GenomeBrowser | scaf816:33366..43375 |
Genes list of scaffold | scaf816 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 7-1 |
Description | This gene model contains DUF2699 domain, Asp_protease domain, RVP domain, Peptidase_A2B domain, DUF1758 domain, RVP_2 domain and rve domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02519.t1 |
---|---|
Definition | - |
>aug_v2a.02519.t1 gatacgccaaagacttttggaaaacaaaactcttgacttaaaaactgtttgacttaaaaaatgtttgatcaagctagatc tcttgagtctgcaatgaagagttctgagtcgtatgcagttccaaatacacttgtcaatgctgctgttcctgctacgtctg caaaacctgttgatggcctagaagcgaatactctggctgctgcggttacggaaaccacttctctcagctgctatttctgt ggcaacaatagacatccacgttcgaagtgtcctgcgaaggatgctacgtgtgctaaatgccagaaaaagggtcactacgc caaagtatgccaaagtaaagctgcctcaaaggtatcagctgccatgcactctcctactcaaagttttgggtctctatcga aatcaacagcgacagtcaacattggaaaattgcaagttaaagctctgtttgacagcggcagtactgagagtttcatacac ccaaatcttgtccgaagggctggtctgactgtgcgaccagccggtggtgctgtttccatggcttctactgccctatcagc caatgttacagggacttgtacgaccaaccttgaataccaaaaccagaaatacaccaacgttcatctttcagtccttccag ggctctgcgctgacctcatactgggcttggatttccagccgcagcacgagagcatcacttttcagtatggaggcagccaa cccccgctatctgtctgcggcttcagtacgctaaacatggatcccgctgagccttttgctaacctaactgaaaactgtta cctgttgtaagcaaatcccgccgctacagcagggatgatttaaagttcatcgatggagaggtggaacggctactcaagga ggggatcatagaaccaagcaactccccttggagagcacaggttgttgtgaccaaggatgatagtcacaaaaagaggctag ccatcgactactcccaaactatcaatcgcttcacactactcgatgccttcccacttccaaagataaatgatttagtaaat gacattgcacaatatcgggtcttcagcacaaaagatctacggagcgcctaccatcaggtccctctcaaggaagaagatga gcagtacaccgcccttgaagcacgtagcagtctctatcacttcacacgtctcccattttgtgtcacaaatggggtcgctt gttttcaacgcgagatgatgaatttcgttgaacagaacaatctcaatgccgtcttcccttaccttgacaacattacgatc ttcgggaagaccatcaagaacatgatgcaaagcttgagaaattccttgctgcagcaacgagaaagaacatctgttacaac gattcaaaacgcgtcttctcaacccgcaaacttgctgttctttgatatttaattgaggaaggcgttgttcgcccagacgc agaacgactacgtccctcacgcaaccttcccgtgcctcgtgactccagatcacacaacaggtgccttgggttattctcct actactctcagtggatcccagagttttctaaccgcatcaaaccactaaaaagctgtaagtcatcccctctgtcacctgaa gtctgtatcctatatgttcgatcaacgcaagcgaggtaaaataaagaaggacaaaattctgcgttggagaattgaagtag catgttatagcttcgacattgtgtaccacccaggaaaggataatgtactccccgacgcactttccaggggaacctgtgct tcaagattaactgtacaagcttcacgaggcactttgccatcctagtatcaccaggctcaatcacttcattcgtaccaaaa acctacctttttcactggacgaggtcaaacgtgtcacaagtcagtatcaaacatgtgctgaaacgaaacctcgatatcac aagccagaggaagttccactcatcaaacctacccagtcctttgaatggattaatattgattttaagggccccatacgaag taacaacgggaacaagtatttcctgaacatagtcgatgaatactccagattcccatttgtgtttccatgctctgacatat caacggctacagtaatcaagtgcttaaccactctgttctcgttatttggcgtgccagcatttgttcactcggaccgtggt gcttccttcatgagccatgagctgcaagcattcctaagagaaaaaggggtcgccacgagtcgaaccactagctacaaccc tgcaggaaacgggcaggttgagaggtataacggtattgtatggaaggctgttgaaatgtctttgaagtctaagaacctgc acaccaagtattggcaagtcgttctgccagatgtcctccattctatacggtccctgttgtgcacgtgcactgccacaaac gagaccccacacgagcacttcttcaggtttcctcgacggtcctcttctggtgcatccattctgacttggatggcggaact cggtgcggtccttctcaagcgccatgtccgcccaaccaaagctgatccattagtcgacgaggtggagctgctccaggcca accctcactatgcctttgtgcgctaccccgatggtaaagagacaacggtttcaacaaagcacctggcgcccaagcccaca tcagcacccaaggaccaaatcctgccaagagatagtgtgctagaatctacagttggaaattcaccttcctaagttttacc tgcagatgtatagcaaaaagtaccaacagcaactgaacaaaccaatgtaactgttggctcggaacaacccacttgtcgac gctcgggacgaatcaggtatcctgtggataggcttaatctttaaaggacagggtgaatgtcgtaaaagattatatcttct gtttgtaaaattatgttgggttgcctgtggcttgtgagcccagtgtatgttagcggtatgttgtgtagtcatagccgcca tgttgtatttttttagctagatttattgccggttagagcctaccttacaggcctatacgttgttaactttcactacaatg gcttagcgacttattcctattgcattttcagagcttaaaccacaatcacaggaaaaaaacacaaacaccccaattagcaa aaaagtcgtgacttctttaaagtgcacctaacccccaaaattttttttcgctaaaatgaatccacttaccgtttaaacta attctgtgaaaaaatttttgaatttggttgaatcgtcgattttctacggcccgccaaagtcgtgcgcgaggtgttgcacg accgcgttttagggagtctgggtcgagcaagactatgacgtctacccaggaaccgaatagaccctcagtcattttccttt gctttcttgggacgtggtacttgcttttgtatattttagatctgaagcgtccaaannnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnttctcgctttgaaaacacacgccatttcatacaaaataaggaaaatggccttgacttaaaatagc tgaggatctgatgcactctccaaatacttcacccgaaatgtgaacctggcgaggagccatttactagggttgttcatgtt cccttttagtaacataacgtcgcaaatgtgcaagaaaagcatatgacgcacacttaccatctaattgaggccaaaatttc catggaagcgaaaaaataaaacaaagagagagtagaaattatcacatggttattttaagaaagcttcccttatgtttctt tttctaatcttttcagtttactaggtaagtcatgtcacgacctatctatgtggcttataagtaaattgactgaattaaaa atcccttaaatccgcgtgtgctccacgtgtgctccacgttataacaacaatttcccaccctctgcagttttaggtaacaa tcatttttttggagaaacttgttcaccaaaataactaacttatgttgttagctagtgttctctcgagtttccactatatt ttgttgaagtgatttgttgaattccgcatagatagctgcacttcaagtaattgcgagttagtcgaaagacttttcacatt tcctcatcccggcaaagtggtgatattctgcttctacctcggtccgtattgggaagcttttgagtacagaaaatggtttt taaacttaaaaggaagcttctaccgtggtccacactctcttgtgaataccaggccggggtatgggggagatgatggttga agttaaatgcaagttaacgggtattgaaatcgctccttaatcctattaccctttcaaagtttaaactacaatcacaagca gaaccacaaaaccacttggtgcaacaaagtcattgcaactcctctcacatttgtattggaaagacgtttatggggttcga ctttcgttccaacatttgcttgagaataattcaccttgtttgaaaaaccggcgatttcttttaggttacaaggacgattg gactaaggactaattattcctttgaaaacacacgccatttcatacaaaccaaggaaagagacactgattaaagttaaggg ctggcacacaaagaatgtggctgaggatttactccaaacacttcaataaaactccaaacacgtctctaaaatgcgaacca ggcaaggagcccatatcctgggttgtttatgttcccttttaggaaaataaagtcacacataagcaagaaaagcaaatgac gcgcacttacaagctaattgagaacagaaattccatgaaagcgggaaaaatgaaaaatagaaagaagcatatcgttagtc ctagaaagccttgtttccttgatgtttcttttccagattaggtaaatcaggttaaaannnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnntgtagcttaaaagtaaattgattttgaagtgtattaaatcttgtttcattttcctttacagatttgc tctttgtggatagaatgcatgtatgcaattctggccagatacccattgtcgtaacagattatatcttctgttcgtcaaat tatgttgggtttcctgttgcttgtgagcccagtgcatgttagcggtatgttgtgtagtcatagccgacacgttgtatttt cgtagctagatttattgctggttaaagcctaacttccaggcctataagttgttaactttcactacaatttaaccagcaat aaatctcaagagtataatggataaagtcttaaggccggaacgtctagacacagatccaaacagtgggacagcggcaaagg aatggcttcactggagacgtacattcgaaaacttcatggccgtcttgccacaagaaggtttggataaacttgcagtcctt tctaattttgtttcgccaagcattttccaacacatcgaagattgtacagattatgaaacatcaattgaaacacgtcagac actgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaatgtttgatcaggcta gatctcttgagtctgcaatgaagagttctgagtcgtatgcagttccaaatacacttgtcaatgctgctgttcctgctacg tctgcaaaacctgttgatggcctagaagcgaatactctggctgctgcggttacggaaaccacttctctcagctgctattt ctgtggcaacaatagacacccacgttcgaagtgtcctgcgaaggatgctacgtgtgctaaatgccagaaaaagggtcact acgccaaagtatgccaaagtaaagctgcctcaaaggtatcagctgccatgcactctcctactcaaagttctgagtctcta tcgaaatcaacagcgacaaccacattggataaattgcaagttaaagctctgtttgacagcggcagaactgagagtttcat acacccaaatcttgtcagaagggctggtctgactgtgcgaccagccggtggtgctgtcttcatggcttctactgccctat cagccaatgttacagggacttgtacgaccaaccttgaataccaaaatcagaaatacaccaacgttcatctttcagtcctt ccagggctctgcgctgacttcatactgggcttggatttccagccacagcacgagagcatcaattttcagtatggaggcag acaaccctcgctatctgtctgcggcttcataaccctcaacatggatcccgctgagccttttgctaacctaactgaaaact gtcaccctattgtaagcaaatcccgccgctacagtagggatgatttaaagttcatcgatggagaggtggaacggctactc aaggaggggatcatagaaccaagcaactccccttggagagcacaggttgttgtgaccaaggatgatagtcacaaaaagag gctagccatcgactactcccaaactatcaatcgcttcacactactcgatgccttcccacttccaaagataaatgattttg taaatgacattgcacaatatcgggtcttcagcacaatagatctacggagcgcctaccatcaggtccctctcaaggaagaa ggtgagcaatacaccgccctcgaagcacgtaacaatctctatcagttcacacgtctcctatttgatgtcacaaatggggt cgcttgttttgaacgcgagatgatgaagttcgttgaacagaacaatctcaatgccgtcttcccttaccttgacaacatta cgatcttcgggaaagaccaacaagaacatgatgcaaagcttgagaaattccttgctgcagcaacgagaaagaacatctgt tacaacgattcaaaaagcgtcttctaaaccagccatattgctattcttggatatgcaattgaggaaggcgttattcgccc agacccagaacgactaccttcctgtgcctcgtgactccaaatcactgaacaggtgccttgggttattctcctactactct cagtggatgccagagttttctaaccgcatcaaaccactaacaagctgtaagtcattccctctgtcacctgaagctgttat cacatttgatagcttgaagaaaatagtagaagaagccttcattgctgccatcgacgagaccataccatttgaagtcgaaa ccgatgcatctgatgtagccctagctgccactctcagtcaagatggtaggccggtcgctttcttgtcacgctcactacag ggtagcgagcttaagcatgcagccatagaaaaggaagctcaagctatcattgaagccatcaggcattggagacatttcct gacaggccggcacttcactctgaggaccgatcaaaagtctgtatcttatatgttcgatcaacggaaccgaggtgaagtaa agaacgacaaaattatgcgttggaggattgaactagcatgttacagcttcgacattgtataccgcccaagaaaggagaat gtacttcccgacgcactttccagggcaacctgtgcttctgcgcctcaagattcactgtgcaagcttcacgaggcactttg ccatcctggtgtcaccgggctcaatcacttcattcgtaccaaaaacctaccttattcactggagaaggtcaaacgtgtca caagtcagtgtcaaacatgtgttgaaactaaacctcgatatcacaagccagaggaagtcccactcatcaaagctacccag ccatttgaacggatcaatattgatttcaagggcccattaccaagtaacaacggaaacaagtatctcctgaacatagtcga tgaatactccagatttccatttgtttttctatgctctgacatatcaacgtttacagtaatcgagtgcttaaccactctgt tctcgttattcggcatgccagcatttgttcactcggaccgtggtgcttccttcatgagccatgagctgcaagcattccta agagaaaaaggggtcgccacgagtcgaaccactagctacaaccctgcaggaaacggccaggttgagaggtataacggtat cgtatggaaggctgttgaaatgtctttgaagtctaagaacctgcacaccaagtattggcaagttgttctgccagatgtcc tccattctatacggtccctgttgtgcactgccacaaacgagaccccatacgagcgcttcttcaggtttcctcgacggtcc tcttctggtgcatccattccgacttggatggcggaacccggtgcggtccttttcaagcgctatgtccgcccaaccaaagc tgatccattagtcgacgaggtggagctgcaccaggccaaccctcactatgcctttgtgcgctaccccgatggtagagaga caacggtttcaacaaagcacctggcacccaagcccacatcagcaccccaggatcaaatcctgccaagagatagtgtgcta gagtctacagttggaaattcaccttcctcagttttacctgcacatgtacagcaagaagtaccaacagcaactgaacaaac caatgtaactgttggctcggaacaacccacctgtcgacgctcggaacgaatcaggcatcctgtggatatgcttaatcttt aaaagacagg |
Protein
Protein ID | aug_v2a.02519.t1 |
---|---|
Definition | - |
>aug_v2a.02519.t1 MFDQARSLESAMKSSESYAVPNTLVNAAVPATSAKPVDGLEANTLAAAVTETTSLSCYFCGNNRHPRSKCPAKDATCAKC QKKGHYAKVCQSKAASKVSAAMHSPTQSFGSLSKSTATVNIGKLQVKALFDSGSTESFIHPNLVRRAGLTVRPAGGAVSM ASTALSANVTGTCTTNLEYQNQKYTNVHLSVLPGLCADLILGLDFQPQHESITFQYGGSQPPLSVCGFSTLNMDPAEPFA NLTENCYLLLNHFIRTKNLPFSLDEVKRVTSQYQTCAETKPRYHKPEEVPLIKPTQSFEWINIDFKGPIRSNNGNKYFLN IVDEYSRFPFVFPCSDISTATVIKCLTTLFSLFGVPAFVHSDRGASFMSHELQAFLREKGVATSRTTSYNPAGNGQVERY NGIVWKAVEMSLKSKNLHTKYWQVVLPDVLHSIRSLLCTCTATNETPHEHFFRFPRRSSSGASILTWMAELGAVLLKRHV RPTKADPLVDEVELLQANPHYAFVRYPDDLLFVDRMHARSLESAMKSSESYAVPNTLVNAAVPATSAKPVDGLEANTLAA AVTETTSLSCYFCGNNRHPRSKCPAKDATCAKCQKKGHYAKVCQSKAASKVSAAMHSPTQSSESLSKSTATTTLDKLQVK ALFDSGRTESFIHPNLVRRAGLTVRPAGGAVFMASTALSANVTGTCTTNLEYQNQKYTNVHLSVLPGLCADFILGLDFQP QHESINFQYGGRQPSLSVCGFITLNMDPAEPFANLTENCHPIVSKSRRYSRDDLKFIDGEVERLLKEGIIEPSNSPWRAQ VVVTKDDSHKKRLAIDYSQTINRFTLLDAFPLPKINDFVNDIAQYRVFSTIDLRSAYHQVPLKEEAILLFLDMQLRKALF AQTQNDYLPVPRDSKSLNRCLGLFSYYSQWMPEFSNRIKPLTSCKSFPLSPEAVITFDSLKKIVEEAFIAAIDETIPFEV ETDASDVALAATLSQDGRPVAFLSRSLQGSELKHAAIEKEAQAIIEAIRHWRHFLTGRHFTLRTDQKSVSYMFDQRNRGE VKNDKIMRWRIELACYSFDIVYRPRKENVLPDALSRATCASAPQDSLCKLHEALCHPGVTGLNHFIRTKNLPYSLEKVKR VTSQCQTCVETKPRYHKPEEVPLIKATQPFERINIDFKGPLPSNNGNKYLLNIVDEYSRFPFVFLCSDISTFTVIECLTT LFSLFGMPAFVHSDRGASFMSHELQAFLREKGVATSRTTSYNPAGNGQVERYNGIVWKAVEMSLKSKNLHTKYWQVVLPD VLHSIRSLLCTATNETPYERFFRFPRRSSSGASIPTWMAEPGAVLFKRYVRPTKADPLVDEVELHQANPHYAFVRYPDGR ETTVSTKHLAPKPTSAPQDQILPRDSVLESTVGNSPSSVLPAHVQQEVPTATEQTNVTVGSEQPTCRRSERIRHPVDMLN L* |