Gene
Gene Model ID | aug_v2a.02618 |
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Locus | scaf861 : 72757 ... 78675 : - |
To GenomeBrowser | scaf861:72757..78675 |
Genes list of scaffold | scaf861 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 109 |
Description | This gene model contains DUF1759, DUF1758, RVT_1 and Peptidase_A17 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02618.t1 |
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Definition | - |
>aug_v2a.02618.t1 cgatttcttgctaaccggagtcccgagggttgaaaacctacgatgtcagaagaggcaatggatgaggcgaaaaggaagcg caggacagcgaaggcagcgctaacccgtcggggaaacaccctgcgaaaaaagctgaaagagggcagacccgtagacgaaa ttatcgaagcctttcatgacatgaaagcagcgttcgagaacttggtggtgaaacacgaggaatacgcgcaattgattctg gatgatgaagcattcgaactggaggagaaatggttggaggagtgcgaggacttctatcttgaaatggaaatctgcgctaa ggattactcgaaaatgaaatcggcatcgaacggcgaaaaatcaggattggacaacggaaagtcagcatcggacaatggaa cttctgtcgtggaaagtgaaaaatcaatattggagagcggaacttcggagctggagagcggagcgaaggattcagagagt gtaattgagatggaaatcacaaaacaagcaggaaattcagcagtacaaagcaaaggactcagcatcgagggaccagctgc gaacgaaacagaagccgggtcaggaatcgaacacccgacacctgaagaaaacactgaaggaaacggcgttgcttgtagca acgggaccaaacacgaaagcagcgtaaatgttccatgtggttttaaaatggaaaagccgaagatgcctcgcttcgcaggg gacgttagggactatgcgatattccggtccgacttcaaacacgcggtggatagcaggtacagcaagagagatgcgatttc tttgcttcgtacaagtctacaagggcgaccactggacttgataaagggtatcggtacagattacgacgccgcatggagct atctagactcggtctacggtgaccctagattcgtagcagacaccataacccaggatatcacaaagttcagacctcttcgc gatggagaagatgctaggttttgcgatttggtgcaccttgtgcaaagaagttttaccacacttaaagaggttggacgacc gcatgacatggataacaatcacatgttggcccttattgagcagagaatgtgtacggacgaccgtaaaatatgggcgcgtc acctagagaacagcggaaaggaggcaaccctggcacagttaattgcctggatgaacactgagatgaaatccaggatgaga gcgacggcacctttgagaagcacaggccaaccagcaaggcatcccgttggccatattggatccgattttaacgctccaaa ggcaggtctaccgcacaagtgttggatttgcaaaaattcaagtcactggattgaccagtgtcagaagtttgcttcgttga gtctagaaaataggataaaggctgtaaaggagaaccacgcatgcttcagctgcttaaaacgcgccggaagagatcacaga tccattaattgttccagaagacgccagtgtcctgaaagaacaaatggaagccaatgcccttattaccatcaccctctctt acacggagcaattcagtcgactgtcgcaactataacttcggtgattaacaagcagaaagcattgttgcctcgcgtgcaag tagacatcattggaccaggccgtttcttgcagagagcgaacgcgttgcttgattcaggggctcaaatcagcttaatcaga tcgagtgtagccgaagacctcaaactaaagggaacggatatagtgataacaatcacaaaggtgggcggccaggaagaaga actcattacaaagagttatcaagttcgcataagatcacttgaagaccgcagcgcacacgtcatacaagcaatcggaattc cctctatcagcgaggacatcgcggatgtcaaggttgccgacattgcaagacaatttggtctcggaaaaggtcagcttcgt cgaggaaatggagatatagacttgctcatcggaatagatcaagcgaagctgcacacgggtgaaacgagagaggcaggaaa cgtggtagcccgtcattcacctctcggttgggtggtgtttggagcagttccgggcaagcagtcagaggccagtcgtgttt accatatcaagctcgaaacacctatagacatgacagacttttggaccacggaaagcatgggtgtttctgtaaagccttgt agttgtgaagctggaaagctcagtcagattgaaagggaagaagcgaagatcatagaagaatcctgcgagaagatagacaa tcagtggctaatcccttatccctggaaaaaggaccctcgtcagttacccaacaacaagtctcaagcaatgaagaaattag aggcaaccgaacgccggctgctgaagaatccagatcacgccgctgcctatgatctccaaatggttgaaatgaaggaacta cagttttcaaggcgattaacagagaaagaggcaagagaatattctggtcctgtccacttcatctcacatcacgaggtttt acgaccagaaagcaagagcacgccagttcggattgtgttcaactcgtcagctgcgttccaagggcacaagttaaacgaat attggatgaaaggacccgacctgttgaatgacttgtttggtgttgttctcaggttccgagaaaatcaggtggcattcatt ggggacatatccaaaatgtaccatagaattcgcattccagaaatggaccaacatgtgcacaggttcttgtggaggaattt acagacacaccgtgagccagacgtttatgtcaaaacagtcttgacattcggagataaaccagcccctgcaatggctcaga tagcccttcgaaaaacagcagaagaagcgaaagaagctttcccagcagcagcgcaagtaattcagaataatacctacatg gatgacatctgcgactcagtaccaaccaaggaagaagcacgcgtcctgaccagagatatagacagcgtgctggagacagg aggttttagagtaaaaggctgggtgtcaaacaaagtggaaacactagacgcccccaaaggagaacagaaagcagcaacgt ccctgcaaggaggaaatgtagagaaagtcttgggcgtggtatgggacagcagcacagatacattttcgtttgcagtaaaa tctgatctactagactgtcaggagtcgatacagctttcaaagagaaaagtgctgagccaaatagcgcgcatctacgaccc aataggatttgcaagtgcattcattatcagtgccaagatcgctctacaggcgctttggaaaaggggaatcagctgggatg aagagctaccgcccgaactgtctcaaaggtggaaaaaactatttcaagaaatagtgcagttgaatggggtgcagtttgat agatgtctcacgccgccaaacgcaattggacagcccgtcctttgtgttttctctgatgcttcagaagatgcatttggggc ttgtgcatatgcaagatggcaattaagtaccggaggtttcaacgcacagttcatcgcggccaagtcaagagtggcgcctt tgaagaaactgaccataccccggttggagcttcaaggtgcagtgttagcctcccgactgggcaagacaattcttaaagaa tctcggctaaagtttgagaaatcggtgttcttcctggatagcaagattgtgttggcatggatctgcagcgaaacaaggcg attcaaaccattcgtttcagtcagagttggagaaatccaagataattcagatcccgctcagtggagacacatcccaggag agcaaaacgtagcggatgatgtatcacgtggaattcccgtggaaagcttgactggcaggtggcagtatggaccagacttt ctgcgtctaccggaaagtgagtggccacaagactcctcagttgctgaaagttgacgttgaaacggagcaccgtaaagttc acatagttggtgagcagatcaagacacattctccaattgattgcgacaagttttcaagctggagacggctaatcagagtt acagcttacacgttgaggtttattaggagggtgcgagcaagtgggaacaaagagtcagcagaggaaggaaaaccattgaa gtcggaagatggccctctctcacccgaagagttgaaggatgcagagacttactggttaaaggagagtcagaaaaccctga gagatcgcctcagcaaaggagaatttagaaatctcagcccttacgtagaccaagaaggcgtatggagagtaggtggccga gcagacaaagctttagtctcgtatgagaccagacatcctgtgttgcttcccggagatcatcggatatcgcgtctcatcgt tcagcatgctcatcagtttggacacccaggagtggcaacgacagttgcaaaaacaagaacaaagtactggatcgttcgag ctcacgacctggcgaagtcaataaagttccgttgtgtggtttgccgtgaaattggagcaagagttgaatcacaagtcatg gctgacttgcctcaaagtcgtctagcaccgtttactccaccgtttcaccacacatcatgtgattattttggcccttaccg agttaggatcagccgcaacaagattgtcaagcactatgctgtgatttttacatgcttaaacacgagagctgttcatcttg aactagcggcggattgcacaacgatggaatttatgcaagttctcagaagattctatgcattaagaggggtacccgcgttg atgatcagcgacaatggctcccagttagttggtgcagaacgagaactgcgaaagatggttgagggattggacaccgagaa gctacaagaattctctgcggaaagaggaatgaagtggcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacgtgtctcgtt gaagttgcgaatttagtcaatcagcgtccaataggccgaattcccagtgatcccgacgatggttcatatctttgccctaa tgatatgttacttggaagagcgtcgcctactgttccacaaggaccattcaggcacactaagaatcccaggcacagacttg aatttgtccagagaatagttgactccttttggacccgctggacaagagatgtcttcccgtcactactaccaatgaaaaag tggcacgccgagaaacgtaatgttcgagttgatgacgtggtaatcgtgcaaacctcaaatgcaattcgtggaacatggaa tgttggccgagtagtcagtgtctaccccggaaaggatggaagggtcagaaacatgaaagtcagaacccgcaatggtgaat atgaacggcccatcagcaagattgcagttatatacccagcagagggatacaaagaccaggacaagtagagatgagagcta gcgccctcatcggggcggagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn |
Protein
Protein ID | aug_v2a.02618.t1 |
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Definition | - |
>aug_v2a.02618.t1 MSEEAMDEAKRKRRTAKAALTRRGNTLRKKLKEGRPVDEIIEAFHDMKAAFENLVVKHEEYAQLILDDEAFELEEKWLEE CEDFYLEMEICAKDYSKMKSASNGEKSGLDNGKSASDNGTSVVESEKSILESGTSELESGAKDSESVIEMEITKQAGNSA VQSKGLSIEGPAANETEAGSGIEHPTPEENTEGNGVACSNGTKHESSVNVPCGFKMEKPKMPRFAGDVRDYAIFRSDFKH AVDSRYSKRDAISLLRTSLQGRPLDLIKGIGTDYDAAWSYLDSVYGDPRFVADTITQDITKFRPLRDGEDARFCDLVHLV QRSFTTLKEVGRPHDMDNNHMLALIEQRMCTDDRKIWARHLENSGKEATLAQLIAWMNTEMKSRMRATAPLRSTGQPARH PVGHIGSDFNAPKAGLPHKCWICKNSSHWIDQCQKFASLSLENRIKAVKENHACFSCLKRAGRDHRSINCSRRRQCPERT NGSQCPYYHHPLLHGAIQSTVATITSVINKQKALLPRVQVDIIGPGRFLQRANALLDSGAQISLIRSSVAEDLKLKGTDI VITITKVGGQEEELITKSYQVRIRSLEDRSAHVIQAIGIPSISEDIADVKVADIARQFGLGKGQLRRGNGDIDLLIGIDQ AKLHTGETREAGNVVARHSPLGWVVFGAVPGKQSEASRVYHIKLETPIDMTDFWTTESMGVSVKPCSCEAGKLSQIEREE AKIIEESCEKIDNQWLIPYPWKKDPRQLPNNKSQAMKKLEATERRLLKNPDHAAAYDLQMVEMKELQFSRRLTEKEAREY SGPVHFISHHEVLRPESKSTPVRIVFNSSAAFQGHKLNEYWMKGPDLLNDLFGVVLRFRENQVAFIGDISKMYHRIRIPE MDQHVHRFLWRNLQTHREPDVYVKTVLTFGDKPAPAMAQIALRKTAEEAKEAFPAAAQVIQNNTYMDDICDSVPTKEEAR VLTRDIDSVLETGGFRVKGWVSNKVETLDAPKGEQKAATSLQGGNVEKVLGVVWDSSTDTFSFAVKSDLLDCQESIQLSK RKVLSQIARIYDPIGFASAFIISAKIALQALWKRGISWDEELPPELSQRWKKLFQEIVQLNGVQFDRCLTPPNAIGQPVL CVFSDASEDAFGACAYARWQLSTGGFNAQFIAAKSRVAPLKKLTIPRLELQGAVLASRLGKTILKESRLKFEKSVFFLDS KIVLAWICSETRRFKPFVSVRVGEIQDNSDPAQWRHIPGEQNVADDVSRGIPVESLTGRWQYGPDFLRLPEIGEQIKTHS PIDCDKFSSWRRLIRVTAYTLRFIRRVRASGNKESAEEGKPLKSEDGPLSPEELKDAETYWLKESQKTLRDRLSKGEFRN LSPYVDQEGVWRVGGRADKALVSYETRHPVLLPGDHRISRLIVQHAHQFGHPGVATTVAKTRTKYWIVRAHDLAKSIKFR CVVCREIGARVESQVMADLPQSRLAPFTPPFHHTSCDYFGPYRVRISRNKIVKHYAVIFTCLNTRAVHLELAADCTTMEF MQVLRRFYALRGVPALMISDNGSQLVGAERELRKMRPIGRIPSDPDDGSYLCPNDMLLGRASPTVPQGPFRHTKNPRHRL EFVQRIVDSFWTRWTRDVFPSLLPMKKWHAEKRNVRVDDVVIVQTSNAIRGTWNVGRVVSVYPGKDGRVRNMKVRTRNGE YERPISKIAVIYPAEGYKDQDK* |