Gene
Gene Model ID | aug_v2a.02645 |
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Locus | scaf870 : 55016 ... 59271 : + |
To GenomeBrowser | scaf870:55016..59271 |
Genes list of scaffold | scaf870 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 71 |
Description | This gene model contains Retrotrans_gag, RVT_1 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02645.t1 |
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Definition | - |
>aug_v2a.02645.t1 gtgagagaaatttaaatggctatggaagtgctgacaaaaggaccgattctcgactggacaagcgatggaaaactacatga gcgtttcctagaatggaaaaaaaaggtttctgtctgatgcaaaggtttaaggatgactaaagcagatccagaattcacat gcttgtgtatttaccagtggtcaggagagcgcggtcaaaatattcccgacaaggcgacgttttccgaagcggatctcaag aattggggaaagtacctcgaaaaattggaggagcactgccaaccgaggggaagcaaactcgtcgcggctactcaatacaa ggtgttaacgcaaggagatatggaactatccgagtacatcgaaaagtgcagacaaattaccgacgcatgtggatggccag agaacgccaaagacatggctctccggaatgcaattctccttggactcaaaaatccaatggtgtatcagaaatgtttggaa gagaaccaagatacacttacagcggacagggtcatcaagattgctacggacatctacaatagcgattgtcaaagatcgat tgtgcagcctctcagcacagcatcggcagcagccacagccatacaacaagggtcaactcaagtttacaagctacaaggaa atcaccaagaagatggaaaatcagaaaaaggacacggaaaaaatttcacttcccaagacaaagatggaatgaagcgacaa gactgttatcgttgcagagcaaggccagctcatccaaagtctaagtgtccagccaaggatgtaatatgtcacaactgtgg taaaaaagggcattaccagaagtgttgcaaaatcaaaaaagcaaaaccaggcaagagcagaacgttcaaacaaactcaag tgcatgacttgcagacacaaccagtggagggaaatagccagcctccaatcaacccgtatccaggcccctacctgccgctt gagccgctccagcagtgctcaagtcagccagcattgtttcaccatattcagacgtatcatgttaagggcattaaagacac ttaaagcaagcatatcaagccactttggttgagtgcagcaagtgaaggaccaattcaccaagttgagattgagatcgaca ctggcgcgggatacaatgtaatgcctttatacatgtacaaatcgctgcttggaggtaacgaactgatgcctacttccgtg caaatctacggatacggagaatctccgatagcaaatcttgcagcgtgtataattaccattcaaaccagcaataaacagcc acagatggcaacctgtcaggtgacagacactcgaggaaaccttattctaggtagaacaacagcgcagcaaattggttaca ttgacttcccagtggtaacaccacccgctttaacccgtgttccacaagtccatacgagtgtgaatgctttacgtccaaac ttagatgaagttaaaacgcccatatgtgaaatgacaaatgatgcagttatcctgaatggaaagagacactgtttacctat tagaaaggagtatgtattgtcataatttaaagatgtgttcgaaggcattggtaaactgccaggagggaaataccacattg aactggaaccagatgctcaacctgtacagcacccacccagggcagtgcccgaaaagaggagggaggcctataaaaatgag ctagaaagattatgcagcttaggcattatcgaaccagtgtggggacacactgactggatcaatagcattgttcctgttgc aaaaccagatggatcgattcgactctgtctagatccaaaagacctcaacaagagtatcaagaggaaccagtactactcca agacgattgacgaagttagtgctgaactccatgactcgaggtatttcacagtcgttgacgccaagtcaggatattggatg gtggaattggattccgagagctcacttttgacaaccttcaataccccgtggggaaaatacaaatggctcagactcccctt tggcctgaaagtcagctcagacgtcttccaagagagactaaattccgtcctacaaggagtaaaaggaatcaccggatgtg ttgatgacatcctagcaagaggtgtagattctaaggatcacgatgtgaacgtgctcaagctgcttgagacagcaaggatg aaaggcataaaattcaatccaaagaaactgcggttcaagagcagcaaatgtgaattctttggacacactctgacgccgga aagaatgaagattgatgacagaaaagtggaggccataaagcagatgagtgcaccaaaagacacgaaaggtcttcagagtt tccaaggcatgattaattacctgaagcgctattcagtcaaactaatgaaactctccgagccgctcaagccgctactaaga gaagatgtggaatggatttgggattccacccatcaagatgcatttgacgcgaccaaagaagagctcatcaagactccagt actcgcgtatttcaaccctaagtctgaacatgttattcaaacggatgattctttgaaaggattgggtgcagtgttgctac aagaaggtagaccagtgatctacgtattccgaacactcacgcctgctgaggcggactactccaatatagagagagagtgg tattcgtcatggagagactgcacaactatgtgtatggtgagccagttcgagttcaaacggatcacaaaccactggagacg atttggaaaaagcgaattgccacagcaagcccaagacttcaaaggctcctcttgaggcttgcaagatacgaaattcagtt agagtacatcaggggaaaagacaactcaatagcagacgcgttgagtagagtcgatccactcagtccagaaccccaggacg caaagcagatggatacaattccggtgcatcagattactaacgctattccagccacagacaatcgcctggacagaaccaga attgccaccactgcggatccaactcggaataagctacgacattacatcttccacggttggccacttcagaagtgtcaact tccacaaccaatacagcattactggaattatcgtgaagagctagcaatagaagacggactgatattcaaagctcatcgct tagtgattcccacatcgcagagagcagaatatctgaaagatcttcatgcaggacacttaggagaggagaaaaatctacta agagcacgcgagacagtgttttggccaggaatctctgatgacatcagaaatgctgtgaaagcatgtgacatttgccagaa acacaagccagctcaacagcaggagcccctcaagccgcatgacgtacctagcatgccatgggtcaagctcggaatcgacc tatttgaacaccgttcccaccactacctactggttgcagattatttaagcaaatttcctattgtgaagaaactgtctaat cagacgtcaggtcacgtgattggtctcctcaagacaatctttgcggaatatgggattccaacaatagtgtacacagatca aggaactcaatttgcatccgaggagttcagagcatttgctgctcagtacaggttccaggtgcagcactcaagccctaggt acccccagtcaaatggtttcattgacgccacggtcaaaacggctaagaacatcatggaaaaggcagaagagtcaggttct gatccacatcttgtaatgctgatctaccgatctacaccaatcagtcccggtcaactaagcccagcagaactgctcactca gcgcaagtatagagcactcctgccagttcaccaatatctacatcctaatctggagaagagcagagaagcgcaaatagcac agaaacagacccacgcgaattataacaatcagaaagccaagcagctccaggatctacagcaataccagaatgttcgatta caactggatcctaataaaccaatatggcagaaagccacagtggttcagcaacccaccgataggtcacccagacgttatca agtgcagaccgaatctggagcaagatatttcagaaaccgtcgacacttgcgtccggcaattcagagcgaccaaaccagaa aatctaatagcgcaacctgccacttcagcagaataacttgcgccaacatcaccacacacaaatactgtcaatcggacttt gtcgacgcagtgtgcacaggaccacacccatcccagtattgcaacctctagaccacgacgaactggtagaccactaaata gactgatcaaagaagt |
Protein
Protein ID | aug_v2a.02645.t1 |
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Definition | - |
>aug_v2a.02645.t1 MTKADPEFTCLCIYQWSGERGQNIPDKATFSEADLKNWGKYLEKLEEHCQPRGSKLVAATQYKVLTQGDMELSEYIEKCR QITDACGWPENAKDMALRNAILLGLKNPMVYQKCLEENQDTLTADRVIKIATDIYNSDCQRSIVQPLSTASAAATAIQQG STQVYKLQGNHQEDGKSEKGHGKNFTSQDKDGMKRQDCYRCRARPAHPKSKCPAKDVICHNCGKKGHYQKCCKIKKAKPG KSRTFKQTQVHDLQTQPVEGNSQPPINPYPGPYLPLEPLQQCSSIGKLPGGKYHIELEPDAQPVQHPPRAVPEKRREAYK NELERLCSLGIIEPVWGHTDWINSIVPVAKPDGSIRLCLDPKDLNKSIKRNQYYSKTIDEVSAELHDSRYFTVVDAKSGY WMVELDSESSLLTTFNTPWGKYKWLRLPFGLKVSSDVFQERLNSVLQGVKGITGCVDDILARGVDSKDHDVNVLKLLETA RMKGIKFNPKKLRFKSSKCEFFGHTLTPERMKIDDRKVEAIKQMSAPKDTKGLQSFQGMINYLKRYSVKLMKLSEPLKPL LREDVEWIWDSTHQDAFDATKEELIKTPVLAYFNPKSEHVIQTDDSLKGLGAVLLQEGRPVIYVFRTLTPAEADYSNIER EWYSSWRDCTTMCMLEYIRGKDNSIADALSRVDPLSPEPQDAKQMDTIPVHQITNAIPATDNRLDRTRIATTADPTRNKL RHYIFHGWPLQKCQLPQPIQHYWNYREELAIEDGLIFKAHRLVIPTSQRAEYLKDLHAGHLGEEKNLLRARETVFWPGIS DDIRNAVKACDICQKHKPAQQQEPLKPHDVPSMPWVKLGIDLFEHRSHHYLLVADYLSKFPIVKKLSNQTSGHVIGLLKT IFAEYGIPTIVYTDQGTQFASEEFRAFAAQYRFQVQHSSPRYPQSNGFIDATVKTAKNIMEKAEESGSDPHLVMLIYRST PISPGQLSPAELLTQRKYRALLPVHQYLHPNLEKSREAQIAQKQTHANYNNQKAKQLQDLQQYQNVRLQLDPNKPIWQKA TVVQQPTDRSPRRYQVQTESGARYFRNRRHLRPAIQSDQTRKSNSATCHFSRITCANITTHKYCQSDFVDAVCTGPHPSQ YCNL* |