Gene
Gene Model ID | aug_v2a.02824 |
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Locus | scaf956 : 13226 ... 18588 : + |
To GenomeBrowser | scaf956:13226..18588 |
Genes list of scaffold | scaf956 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 1-5 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 1-1. This gene model contains rve domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.02824.t1 | gi|597753106|ref|XP_007238394.1| | PREDICTED: uncharacterized protein LOC103045200 [Astyanax mexicanus] | 0.0 |
Transcript
Transcript ID | aug_v2a.02824.t1 |
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Definition | - |
>aug_v2a.02824.t1 gtgtacaacgtgcttgtagtagatttgcaagttgtgttcgtgtctgatgacagataaagcgtttttggagaatagttgtc tcctttgttgtgttacatttggtggcagcggtgggattgttaattatggaagcaactgtgaaagcgttggagacgaaagt ggcccagttgtaagccaaccttgggaagaaaagcgaaacagcgtccagttcgcacggcgccatgagttcatcgatcgctt tggtagatcattccctccgcattaaacccgaaactttttcggctgcttcgggagaaaactggctggtgtggttgcgaaaa tttaaaaacatcgcttcgctgaataagtggacagccgagcttcaatgtcaaatcttgccagcttacttgaaaggcctcgc cgagcaaacatactacagtctcactgccgagcaaacatccactttggagggtcttcaacgtgcgttgagagatcgttttc atcccaaagaatcacgacaagtacacgtttccaccctgcgggctaagttacgtcgacctggcgagtatttacatcaactg agatgcgaaatcgcccgccttgtcgagctggcctatcccgacgacccgctcgttatacttgatcgtactgcaagagattt ctttattggcgccctaactcccctcgcattacgaaagaaggtgctggatttgggcccgaataccctggatgaggcattgg cggctgctcagcggtatgaatcgaatcaaaaagtgttaagtaaagggagtgctgacgtcctttctttaacgtccaaagag atggacgggaattctactttacgtcaaggtactccagaaccccccgtatgggcttagcagctttttcaacaacaggcaga aattttagagaagttgaagaacattccccaaggaaggcaaggtgggaatgacagtgtagagtatcctcagggccccagag cgtgctttaggtgtggcagtctgaaccatttcatccgtaattgtcctcaccaagttaatcatgaccagggaaactggaga cgggcggggagccagaagtgatcccgcccgataaatctaaaggtgcatttatgccgtgtcgtgtgaatgatgccctgtct tatgctttactggacactggtgcagaagcaacaattatcagtgatggcatttatcatcgtattaacactaatgcaagtaa gcttgagctcccacgaaagcctgttcttggggccaataacttgccgcttgatgttgttggtgaaacagagttgacccttg agcttggtagtatcaaagtgcaacataaggtgctagtatgtcgcgggttaccacaacaagtgttgattggcatagatttt ctcatgactgacaagtgtattatcaactttgacaataacactgtatacagtaaaagagatcccaacagcatggtgtttag tccccttgataaagtctacaggatcaccgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaagaggaaaaacgtaagcactat gaggttctatccacctatgctgactgcatttcaagggggccatgggatttaggctcagcataaggtgagaaacataccat tgacactggatcagcacagccaatacaggtacctcctagaagagtctcttttcataaaaggtaggaaatgcgccgccaag tggatgaaatgcttgaagcacagatcatagagccttccgaatccccgtggtcctcttctgtggttttggttgccaagcct gacggcactcaacgaatctgtgtggactatcgagctctgaacaaggtaatcaagcgagacttgtatccacttccatggtg tgatgacatattggagagcttagctggtgcacactggttttctcaccttgatctgctccgtggatattgacaaatcgatg ttgtggaagaagatcgggagaaaacagcctttgcaaccccggacggtccttaccaattcctcaacttaagttttggcctt actaatgcaccagcgtgtttcatgagggccatgcatcttgtcttagtaggcttgtgttggtcagactgtctagtgtttct agatgacatcattgtctttggccgaaccctccaggatcataaagagagactgtcactgattttgtcgcgtttgtctgaag caggcttgaagatttaccctaagaaatgcaaactcttgtcagaacgagtgattgtgctcggtcatgtggtgacctgggat ggcatttctactgatccagagaaagcgagagtcattaaagagtggccagtgccagaggacgaaagccaactgaaggcatt cttgggaacagtcagttactaccgacaatttgtgccaaactatgctgccattgctgcccttttacaccgtgcttctcaaa agggtgaacgttttagatggacggtgcagtgtgaagaagcctttgcgagcattaagcggaaactgacgaatgcccccatc cttgcttttcctcagttggacgagccatttattttagacactgatgccagcgacaagggcttaggggcagtgttatctca ggttcagggtgggaacgagcgcgttatagcttatgcggcacgtgcactttctagggccgaaggaaactacagcacgaccc ggaaggaacccctagcccttgtctggggagcagaacactttgagacatatctttacggcagaggatttcttgctaggact gaccatagcgctctgcagtggctacagaatttcaagaaccctaggggtcaggttgcccgctggctagagagactgagtga tttcgactttgaggttgaacatcgctctggacaatcgcatggaaatgcagatggactctcgcgtttgacatgggaaagta tcaattccgctgaacaagatgaggatgccgtgtttatcaactccatcaacgtagagccggtgtcaagggaaagtataaag gtagccctgaaacaggatcctattctgtcgcaggtggtggattggcttaaaaccggcgtgaaacctgcgagatgtggtgt ggaaggaggtgggcgcaaacttctgtcatactggtcacagggggggagactgctactaagggatggcctggtattgagac gctgggaaaacgaaaagacaggccaagagatctaccaacagatttgtttgccagaaagctttgtgcctcaagtgttgcat gtcctccataatagcccctcagccggtcacattggtgtgtcaaaaactttggaaaaggtgcgaaggagattttattgcca tggcatgcgtgaggatgttgaaaatcacatcagatggcgcggtccttgtgctcaagttaatgacccaagcaagttgccta gagcacctcttatcaacatcaagtcgggtcacccattgcaaagagttgctatagacattgttggacctacgccaaggtca agccttggtcacgagtggctgctggtggtctctgaccacttcactaaatttgtgcaagcttttccagtaaggaacacatc agctgtaacacttgctaagaaagtgatggacgagtacatatgtcgatttggctgttttgagagcttacattctgatcagg gagccaattttgatggagctgtgttcaagggactgtgtgatttaattgatgctgcaaaaactcaaacaactccatatcat cctcagggggatggacaagtggagaggctaaacaaatcactggtgaagattttgtgcaaattgatttctgaccatcgccg ggactgggccgactttgtgccaaaagcggttcttgcgtacaataccagtgtggacgagtcaactgggtgtaccccttacc gtctaatgtttgaccgggaagctattttgcctcttgacgcagtcctgaagcttgagacgtcaccaccccagagaggggtg cagagttatcctgattatgttgttcagcagaagaagcaactggaggaaacagagcacctagtgagagagaacctcaagcg ggtgcagagaactcagaaagcttactacgacaccaggtgccatggtcaacggtttcatgtaggagaccgagtctggtatc gaaaccgagctaggacaggtaggaagaaattcgttaagccttggtgtggtccttggaagattgtgaaagccctgtctgat gttacctatcgtatcgaagaggagaggaggaaagcggggcagcgacgcaacagaaaggtggtccatttcaattacctgaa accatgttttacacccccgccagtccatgagaagcgtccccaagcaaacacttccggagaagcggctcgaccagagccga gagatgtgctacagccaacccaggaaggggctgatgattctagtggggtcgaattggaatggctgcaagatcccgttgtt ctgatcacagagggccatgtaacgcctcgggttcagggagcaagtgctaccctcgatccaggtgcacaatcctcggaagt tcctgttcccttcagtgaacaatgaaccaagtcaaattccagttagaccgagacgggaacgaagggagccctcgtggctc cgggactatgttagaacagttgttgtttatccgacgttgccttttactcttgttggaacaattgcttattaacttttcga taacttaagctctaacctctgacttatttgggagggagtagtatagcgtagggcctgagcccgacttagttcggacatgc gctgtggctcagtgtacaacgtgcttgtagtagatttgcaagttgtgttcgtgtctgatgacagataaagcgtttttgag aat |
Protein
Protein ID | aug_v2a.02824.t1 |
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Definition | - |
>aug_v2a.02824.t1 MSSSIALVDHSLRIKPETFSAASGENWLVWLRKFKNIASLNKWTAELQCQILPAYLKGLAEQTYYSLTAEQTSTLEGLQR ALRDRFHPKESRQVHVSTLRAKLRRPGEYLHQLRCEIARLVELAYPDDPLVILDRTARDFFIGALTPLALRKKVLDLGPN TLDEALAAAQRYESNQKVLSKGSADVLSLTSKEMDGNSTLRQGKLETGGEPEVIPPDKSKGAFMPCRVNDALSYALLDTG AEATIISDGIYHRINTNASKLELPRKPVLGANNLPLDVVGETELTLELGSIKVQHKDHKERLSLILSRLSEAGLKIYPKK CKLLSERVIVLGHVVTWDGISTDPEKARVIKEWPVPEDESQLKAFLGTVSYYRQFVPNYAAIAALLHRASQKGERFRWTV QCEEAFASIKRKLTNAPILAFPQLDEPFILDTDASDKGLGAVLSQVQGGNERVIAYAARALSRAEGNYSTTRKEPLALVW GAEHFETYLYGRGFLARTDHSALQWLQNFKNPRGQVARWLERLSDFDFEVEHRSGQSHGNADGLSRLTWESINSAEQDED AVFINSINVEPVSRESIKVALKQDPILSQVVDWLKTGVKPARCGVEGGGRKLLSYWSQGGRLLLRDGLVLRRWENEKTGQ EIYQQICLPESFVPQVLHVLHNSPSAGHIGVSKTLEKVRRRFYCHGMREDVENHIRWRGPCAQVNDPSKLPRAPLINIKS GHPLQRVAIDIVGPTPRSSLGHEWLLVVSDHFTKFVQAFPVRNTSAVTLAKKVMDEYICRFGCFESLHSDQGANFDGAVF KGLCDLIDAAKTQTTPYHPQGDGQVERLNKSLVKILCKLISDHRRDWADFVPKAVLAYNTSVDESTGCTPYRLMFDREAI LPLDAVLKLETSPPQRGVQSYPDYVVQQKKQLEETEHLVRENLKRVQRTQKAYYDTRCHGQRFHVGDRVWYRNRARTGRK KFVKPWCGPWKIVKALSDVTYRIEEERRKAGQRRNRKVVHFNYLKPCFTPPPVHEKRPQANTSGEAARPEPRDVLQPTQE GADDSSGVELEWLQDPVVLITEGHVTPRVQGASATLDPGAQSSEVPVPFSEQ* |