Gene
Gene Model ID | aug_v2a.03029 |
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Locus | scaf1055 : 102287 ... 104325 : - |
To GenomeBrowser | scaf1055:102287..104325 |
Genes list of scaffold | scaf1055 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 63 |
Description | This gene model contains RVT_2 domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.03029.t1 | gi|149237791|ref|XP_001524772.1| | conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] | 0.0 |
aug_v2a.03029.t1 | gi|590643301|ref|XP_007030765.1| | Uncharacterized protein TCM_026511 [Theobroma cacao] | 0.0 |
aug_v2a.03029.t1 | gi|657948365|ref|XP_008337255.1| | PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Malus domestica] | 0.0 |
aug_v2a.03029.t1 | gi|297607929|ref|NP_001060934.2| | Os08g0133100 [Oryza sativa Japonica Group] | 0.0 |
Transcript
Transcript ID | aug_v2a.03029.t1 |
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Definition | - |
>aug_v2a.03029.t1 tgtaccaggaacacctcagcaaaatgaggaaatgtgtctttcttgggtacggaactgataccaaagcatatcgtctattt gatgtggaacgacaacgtgtaatctatagccgagatgtaaagtttgatgagagtgattttggtatccttcaaagggaaaa acctgatggaaatgtcaacaggcttgctgatattgaactgtcaaatgatgatgatgcaataattgatgatgatgaaccgt caaatgatgatgaaacaaatgatggtgtcagtgtacagcggccatcacgtgagagacgaccaccagatcgttttggagag tgggctacagtagcaagtgaggaattacagagccagctactgtagatgaagctctaaatgggacagatgcaaatctgtgg catgatgctacgcagcacgaaatggactctctccgtaaacatattgtttttaaccttgttgaattaccaaacggaaggaa ggccattggaagtaaatgggtttttcgtgtcaagcataatgctgatggttcggtagagagatgtaaagccagacttgttg cacaaggctattcacagaaacacggtgtggactatgatgaaacatttagtcctgttgtgcgttttgaatccttaagaact gttattggattgtctgttaaacaaggactgaaactgcatcaaatggatgtaactacagcttttctcaatggagacttaga tgaagaggtttatatgagacaacccgaaggatttattgtggaaggacaggaacatttagtgtgcaaattgaacaagagtc tttatggattgaaacaatcacctaggtgctggaactatgtacttgacgaacacttgaagtcttttgttcagactccgagt gatccctgtatttatgtttctgatgatgattctaatccttttgttattgcagtgtatatggatgacattgttctcgcaat tccatctgacgagaaaatcgctgaaaccaagcaaagcatctctgaaaggtttgagctaaaggatatgggggagctaaagt attttcttggaatgcaagtgattcaggaagatggaaaggtttggattggtcagccctcgtatactgaaaacattctaaag aaatttggcatggaaaattgcagacctgttgctacccctgtagatcccaattcaaaactcactcaagctggctctgataa tgttccttatcaccaatttgagtatcagtcagtagtcggtagtttattatacctgtcatctgtttcacgcccagacataa catttgcagttagcaatgtggctagatactcagcaaatccaaccaaagaacactgggtggctctaaagagaattctgcgg tatctcaaaggaactgtgaactatagcatattcttttcttgcaatgtggaatctgagtgtgttggattctctgatgccga ttgggcaggtgatgtaaacgatcgaaagtcaacatctggttacttatttcaactgtgtggtggagctattagctggagga gcaagaagcaaccttgtgttgcattgtcaactgctgaagcagaatatatggttttgtcatcggctgtacaagaagctcta tggctcgaacatctacttgtagacttgaaagtagttacccagacacccatgagagtatatgaagataatcaagcagctat caacatgacaaagaatcccaactatgatggcagagctaagcatgtggacatcaaatatcaccttgtacgagatcatgtaa ataagaagtcagttggcatagtatattgttctacaaatgatatggtagcagacttgtcaaccaaaggattacacaaagga caattagttaaacttcgtgaacttgctggagttgtagtaaactatagatatttttttttcaaaaaacaatgagaaggagt gttaaaattgacattgtttatatcaaatatcctcgttttggttttggggagcctcgcattggtgttcgctcctcgtggtt gaaattttgagttgttgtttcggtgtttagtgtgcgcag |
Protein
Protein ID | aug_v2a.03029.t1 |
---|---|
Definition | - |
>aug_v2a.03029.t1 MRKCVFLGYGTDTKAYRLFDVERQRVIYSRDVKFDESDFGILQREKPDGNVNRLADIELSNDDDAIIDDDEPSNDDETND GVSVQRPSRERRPPDRFGEWATVARLKLHQMDVTTAFLNGDLDEEVYMRQPEGFIVEGQEHLVCKLNKSLYGLKQSPRCW NYVLDEHLKSFVQTPSDPCIYVSDDDSNPFVIAVYMDDIVLAIPSDEKIAETKQSISERFELKDMGELKYFLGMQVIQED GKVWIGQPSYTENILKKFGMENCRPVATPVDPNSKLTQAGSDNVPYHQFEYQSVVGSLLYLSSVSRPDITFAVSNVARYS ANPTKEHWVALKRILRYLKGTVNYSIFFSCNVESECVGFSDADWAGDVNDRKSTSGYLFQLCGGAISWRSKKQPCVALST AEAEYMVLSSAVQEALWLEHLLVDLKVVTQTPMRVYEDNQAAINMTKNPNYDGRAKHVDIKYHLVRDHVNKKSVGIVYCS TNDMVADLSTKGLHKGQLVKLRELAGVVVNYRYFFFKKQ* |