Gene
Gene Model ID | aug_v2a.03445 |
---|---|
Locus | scaf1217 : 83210 ... 89915 : - |
To GenomeBrowser | scaf1217:83210..89915 |
Genes list of scaffold | scaf1217 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 49-1 |
Description | This gene model contains zf-CCHC, RVP and RVT_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.03445.t1 | gi|585703981|ref|XP_006823365.1| | PREDICTED: uncharacterized protein K02A2.6-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
Transcript ID | aug_v2a.03445.t1 |
---|---|
Definition | - |
>aug_v2a.03445.t1 ttacggcgcaagcttctcgaaaaaggtcaaaccctcacacttcaaaccttacaagagattgcccggaattatgaggcagt gaaaaggcaaacccagagtatgagtctctccagtgtgtcagtgaaccgagttgatgatagacggaccagacgaaatagtc gagatacgactttatcaggcggtaaatgttatcggtgcggaaggcgtgaccattttgccagagaccctctgtgtccggcc aggggaaaagagtgctcaaaatgttctcaagtgggacattttgcaaatgtatgcaaaaccaaagttaaagaaattcccag tagatcacgtgtacagtatatgagggtggatgaatgtaaggaagaggaagaagagtatgtgtttgcagttgctggtgatg ctcaaggaggaaaaatcactgtcaacattgggggtatcccagtggagatgataattgattcgggagcaagtgcaaatgta attagccaagcattgtgggaacaattgaagaagcagcatgttaagtgtgtgtcaagaagaagtacaaagaagttgtatgc ctatggcgcggttaccccacttgaagtgattggaacttttacaacagatctgagtttaggcagcaagagtgtgtccgctg aagtaagtgtcatcaaagggcaaggagaaccattactgggaagagaatcagccgttgagttggatgtctttaaattgcaa gtcccattgaattgtgtggcacgtgtagatcacagtgaactgacaacgaggttcaaggatatttttacagggattgaaaa gttgaaaggctttcaactgaaactacacattgatgagcaagtccagccagttgcgcaacccttacggcgtcctccattca gcttaaaggaaaagatcgagaagaagcttgatgaattattacgagaagacatcattgagcaagttgagggcccaacgcct tgggtaaacccggttgtggtggtccctaagccaaatggtgatgttagattatgtgtggacatgagatgcgccaacaaagc catcattcgtgaaaggcatccaattcccacaattgatgaagttctagaggatatgcaagaagccagtgtgttcagtaaat tagacctaaagtggggatatcatcaaatcgagcttagtgaagagtcccgtagcatcacgacgtttgtaacacacaaaggg ctgttcagatacaagagactgatgtttggtatcacatcatcgcctgagaaatatcagcaagtgattcagcaagttttgaa tggttgcagcggaacagcaaacatctcggatgatattattgtctatggttctgatacagcggagcatgatgagcgactgg gaaaagttctgaccaggttgagagacaagggtctcacaccgaatgaagagaaatgcgtgtttcatatgccaaagctcaca tttatgggcctagtactgtcacaacagggggtgggtccaactgaagagaaagttaaggcagtgaatgaagctcgtgaacc acaaattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnctgaatctgtttctggtattctacattgtcaagccacaaaaattgcaatgtaaactggcgggtttgct ttcataacacagcacatatctagcatttgatttgtccaaacaacatgttgaccttcggtcttcgaaagacaaacgcttcc ctcagtgagttgtcggtaatgccccctctttaaggacgattttcttttcgatcttaccgtgtggtagtttgtgaaccatt gcaacgcttgacattgttgtcaagcaaaaatataaagagtaaacatagagataacgcttcccgtttcctttcaacagcca acgctgattttaaatttgcttgaattaaaacaacggacatcccgctaattatttttcaatttctctcttttaagtactca ctcgatagctgtagttagggttaggttatgattaactgtagtgaagggaaatatcaaacttttttcgttgattttgggta aagggcatgatttcaacagatgtgtcggttgccgcgaaagcgaagccgtatcgatgcaggtaataataacagtatttatc aaaggtgatggtaaaataggactgaagtttggccatcatttctcaattattccaagtggtttggcgtgataaactttctt aaaattaagttggtgtgaaccactaggagattagaggaaaaagttcaaattttgtcgtcttgaaagtactctggtcgttc acacaactgaaaaacaggtcatttcacgttgttaacgggacaagaacgtctaagaaatgtacaaaaatgaaaaattttgc aaagcgtgcaaatctattgtttctcatcgttaaatatgcaaatgtttggtgttcttgtcgccaactttgttgggtttgct tcagctccctgattatccataaagacaccagcgataatactcaaacctcgaacacttcaatcctaacagtagcatgcaat gcttccaaactagttagttactcaagtgggatgggtacgtataatgcaaacgtccgcaatactggtgataactaccatat caaatattcttcaacacacaaataacttatttctttttctaaacgagaggcacaaatatggaactgtattctttgagaac cacggatattgcccgagacatggcttaaacagaaaaatattcatcacacgcctaggataaactaagctatctgtgggtta gagtaattttgtacatttgtttataattttagtaactgaataagcttgatcgaaagaacaatatgtaaatcgggtggcca tggttatgaaacccaaaggtcttaaaattgttcacaaatctctcgcagacaaaaaggccagaattacacgttttcgtttt cgtgttgtatgcactgatctaaacaagctcaattcattcactgtattttagtgacgcaatcgttagaagagatattatca tttttctgtctgttgttttgactaacacttacaggacaggttattcaaacaaaacagacttagggttttgcctgagctca actgtgccttaaccaaaccgtgtttgcagtcgtttttacttttcattgattctacaaatttttctaaattttgaaacaaa taagagcagaggaagaggttatgtgaccggaattagttaagaaaaatatttttttggttaaagtaaacatacacaagaaa atgcaaagagagaacaaatataattgaacggaagttgaagacagaaatgtggttggtgacagatcaaacgaaacgaaaac tcatttcgatggcataggcagtaaatgttgatagataattttaaaagctagacataaagaaacaacaatagtcaagctta tgtttcacattctcgacgaagatagtgaagttgatggggggagggaagagactttattcctaattctgccagaaattttg cgaatattttctacactacacgccgtggtaaatcattgcttacagcattagaggtttggtggctgggggtagaaatttct cttttaattcttgactcgtgcaagttcacttaagttcagttaaaattgtcttttttctttgcctttgttattttgtcatt ctcttgtaattgtgaggaattgcgtttattggtacacaaggtgctttcgtccctcaagagaaccggtttttcctacataa ttggcttgaccatgagaaacgttattttgcgaaaactagatctttaagaaaattcaatttgaaatcctcagttttcatct ccatgttgttagaaaagatatgtttaaccgctagatagtatgaacacagtcacattgtgagtagatgatcctaaaatgca gtatataatcttgttatctaaatattgtgtgtattgtagattgcagttcacgatggaaccatctactctggtttataaag taatacaacttgaaacattcgctttaaatcataaaatgtttaagttaattgcattaattttaaaactacgttatcgaagt tgttacacaaatgttatgaatagccatataggttggtacctatgactattcaatttggttaaatatagttgaaaattaaa aaaaaaaaacacgtcaaaagaagtggagaacccatgcccttcgactaaaaggaaagaaaggataaaaaactttgggaagg tatctcaagttgaagaacgtattcgcctgtaatcacaatttgacggcaaatttcgattggtttaatatattcaaggaaaa gaagctttctttttacacgagatcaaatagttgttatggcaatttttaagcgttttcattagttttgtagaacgacattt tgtttcataataaccattaaaaaaatgctgcaagtgaaatcattcagtacaacttaagtgttaattctcgacagctatca tcttctaaggtgatccaaagtaacagacaatgctttgtattttcgccacccttttttcagcgtgaaagccctgtacttca ctgcgagcagtagcagcggggataagcggtgggagaaaggggtggggggtggggggcgaaaggagctggttttcagacgg aaagaatacgaagcctgggaacgagttggggactactttaatgcttcaaaagaaaactctaatgatgcacgtctagaaag gttttgaaggagccaaagacctcaacctcctaagcgaataactgcatgcaaaaacggtccttgtcaaaaatcatcacagt tgaatgcaaacgagaaaaagcaaggctgataaaacagtgaaagaaaaatatattatttttttgcag |
Protein
Protein ID | aug_v2a.03445.t1 |
---|---|
Definition | - |
>aug_v2a.03445.t1 MSLSSVSVNRVDDRRTRRNSRDTTLSGGKCYRCGRRDHFARDPLCPARGKECSKCSQVGHFANVCKTKVKEIPSRSRVQY MRVDECKEEEEEYVFAVAGDAQGGKITVNIGGIPVEMIIDSGASANVISQALWEQLKKQHVKCVSRRSTKKLYAYGAVTP LEVIGTFTTDLSLGSKSVSAEVSVIKGQGEPLLGRESAVELDVFKLQVPLNCVARVDHSELTTRFKDIFTGIEKLKGFQL KLHIDEQVQPVAQPLRRPPFSLKEKIEKKLDELLREDIIEQVEGPTPWVNPVVVVPKPNGDVRLCVDMRCANKAIIRERH PIPTIDEVLEDMQEASVFSKLDLKWGYHQIELSEESRSITTFVTHKGLFRYKRLMFGITSSPEKYQQVIQQVLNGCSGTA NISDDIIVYGSDTAEHDERLGKVLTRLRDKGLTPNEEKCVFHMPKLTFMGLVLSQQGGMISTDVSVAAKAKPYRCSVKAL YFTASSSSGDKRWEKGVGGGGRKELVFRRKEYEAWERVGDYFNASKENSNDARLERF* |