Gene
Gene Model ID | aug_v2a.03861 |
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Locus | scaf1417 : 41379 ... 47905 : - |
To GenomeBrowser | scaf1417:41379..47905 |
Genes list of scaffold | scaf1417 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DHC-f54 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. This gene model has a Dynein_Heavy domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.03861.t1 | gi|637257855|ref|XP_008124117.1| | PREDICTED: dynein heavy chain 8, axonemal-like [Anolis carolinensis] | 0.0 |
aug_v2a.03861.t1 | gi|585673545|ref|XP_006818432.1| | PREDICTED: dynein heavy chain 5, axonemal-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.03861.t1 | gi|637290849|ref|XP_008107072.1| | PREDICTED: dynein heavy chain 5, axonemal-like [Anolis carolinensis] | 0.0 |
aug_v2a.03861.t1 | gi|602626966|ref|XP_007420434.1| | PREDICTED: LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal [Python bivittatus] | 0.0 |
Transcript
Transcript ID | aug_v2a.03861.t1 |
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Definition | - |
>aug_v2a.03861.t1 gtcaaagatgttcttaatttggtccttttgtgctgcaccaatttcgctttagggcgatgttcgttgtttcattctttgtg tcttaatttatgttatcaattaaatgtttgcctgcagatcgcttgaatcgaaaaacagtggaaaaactggttcgataaag atgctccagaagaggccgacattcctgatggatatgcaaactcttcttgatactctcagaaaactcttgttgattaggta attgtcactaaacgctagtagatgagaaacgtctgactgaaaatttgtttaaagtgccactaacccccaattttttttca ctttaataaactttcgctactgccttgattacgttagcgaaaaaggttttggccctggctttttcctttggatgttgtac cttttcaaggtaaggaagtttggcgcctttttggccgatggacgacaatacaggagaatgggtcttgtttactttgtgac gtcatctcaatgttccattcaagccagtctcattaaaactcgtttcttttcatggtttctacgcaaacagaatcctgatg tttgacggttatctatttgctatgaatgctaatcttaaagtgatgattcgttatcaaagattagaccgttgtcgattgtg gcaagtgcacatatttttgttaataaaagaagcaaaaatacacgaacaagaaccagacacccaaccaaacagcagtgaat cacgttattatcttcaagaggactctagttgacaccttgtgatgcctatacaaagtaatctgaatatcatcattcagctt tattgaatacgtattgtgtgggaacagcgatgaaacacttgcactcgtttttgctaatgttactcacttgttgtatatta gttcgcttggtgaaagcctggctggctatgctgatagatctttttgtttgattttattgttcataattgcaacgtagtta atattgtcgctctttcaaacaagtttggcactggtatcttcttgtctcttgaactctattgttttgaggaaggcctatgt catcactttgtccattcacatttcgaccaggtcgtggtgtccagatctcacgatggcacaggcacggaaatatatcgccg agtccatgggagcaaactacgcagaaaacgtcatccttgatttggagaagatctgggaagaaagtgattgcaacacaccg ctgatcaacttcctgtccatgggctcagatctcattgaaaaactaaccaaaaggcacaagtttggtatgtttcattccat tcagtcttaatagaaaaactatggcacattgtgagaaagcgagcgattcacaattaccttggatataatcgatcgcatgt gctttcatgcgttggtatttgttttatcacggagtgctcaaactaatcggtttccatgatctcttttttttaagattgcc gtgcgatttcgatgggacaaggacaagaaatccacgcaagaaaattggttggaccagtcatgcaaacggtagatgttttg ctgttttgcgaactgatcgagagcgaagcagacggcaccgccaatggcaacgccgcaaatcaatgatatgattggttaat cagaagaaaacaacaacaacaaagcaagcacaattgtgtgtatgcgtagccgctctatagcacattcttttagagaggtt ttcaaatgactgtcgaaagtaataaagcaattacgattaaaaatctcgtgcaagtttttcaacaaatgacaacaaaaacc aaaaccaatcgcaccttgtgcacgtgatttttcccgcgctttgagcaagttacaagtaattactaggaattctatatctg ttatattttatcgagtttgctcctgttgcgatttgtcggggtaattgctttggtattaacttttcggtagtcatttgaaa accactctatgaagttctgtacgagttagaatcgtgaatttacctcgtttaaggttctggcaacaacaaaggtctaacat agtgattcagtttctgtacgctccttgtaagctggtatatcgtttttaaatatttttctgtttgtcgcggtagggaggct tggctcttctccaaaactgtcacctgggtttagaatttatggatgagtcgatggacacagttatggaggctgagaacgtc cacgagtcgttcagactctggatgataacataggagcacgtgcaatttccaatcggccttttgcaggttaggagtcgtta gcatttgataacataggatgaagtagaaccgaatgaaaattttggtacagttctacttcaccctttgttgtctaattctg ttcgtttggagtcgcctattgtttctcttttgacttcagatcattgcagtttcatatgcacctcgagcaacgtgacttgg aaggagggttcaggttataaatgcccctcctaactgcatttgccttccatactgtacagttttatacaataagctaatta cgtgcactaaaattcagttttagacaaataaaaaatcaaagaggcgaatgataatagcttgaaacatggtttagtttatt gtcccctacagtgtttttgtcgccaatcacgagtttagaaaacgctaacaacatgttctttgtattacctttttcttgac agatgatttcttgaaatcagcaacttgccccaatggaaacccatgctttacgctgttgcgtttcttcattccaccgtcca ggtctgtgacatatttttctctagtacttgccaataataattgttaatagtactttcaggcgatctgactggttaactcg gagatgattaacgaagtatggttcacttactagcgttattcactaccgagcaaaaaaaagatttaaatagtcattgcgaa ccatcaaaatcgcgttgaacacgcaattactcgaaatctttgagaaatggccaaaaattcaaagaacaacgacaaaaatg aggaacttgcgcacatttaaaataacgtcatcagcgccaaacgcccaaagaattattcttctttcttgtggccaaatttt tggttttgttttttgattgatcaactttttacaaaaataagcgacaacaacaacacaacatgatagggtaatgtgatcaa caaaaggtatgacttggcaattttattattaactagttccataccgcacaagaagtgcggcactcctcagataaaatatt tgaatgtatagatatatgtttttttcatccattcagcagcgtcgaaagtacggtcctttaggatggaacatcccatatga gttcaaccaggcagattttaccgccagagtacagtttgttcaaaaccatcttgatgatatggatatcaaaaagggcgtct cctggaatactgtgcggtacatgttaggagaagtccagtatggaggaagggtgacagatgatttcgacaaacggctgctt aatactttaaattttgcaaaggttaataatctaaagaagcaaacaactggaattgcagtagtcaacgttcgtcagaactt cgtccaggcgaggttccttgaaattgtgtggtcatgggtaaagtttaggctaattgtgaattccgcagctttcatgatca tttgcaatgtgataccggaaaatatcagttatttaagtgagaaacaaagtaatattggaagagagcaaagttgactaaca ctcggtgttaaaatgagtaaacatttggcaatttcgaatgatacactacaatttatttttatttttcatttgattaaaat aactgagaaacaaagaaactgaatagcgatgatacggagacgaagaatgcatatgacatctgaagtctcttagttgtttg gcccagcgcaattgtatgcactactcactgtgaggggcactgcaaatcaattcaaatgttaggttttgctgcagagtggg aaagccgagtacataccctaaaatccagcgggcagagtagataaccaataaactcaaccaacacctaggatcaagataaa tttggcgattgtgctcgggaaaatttggccgaaggcaagtgctttcaccatcgtgccaaaaccttcaagcccacaatatt cccacattgcatattaaatacaaattcgaatcttgtttgtgtattttacagttttggatacatgtacaacatcaaaaatt ttaaattgactatctcacatcaataattgctcctttttcttcccattcaggtatggttcagtgaatcgatgttccagcaa agttttaacttctacaaaggctattcaatacccaaaggaacatccgtaccgcaatttatggattatatcgacactcttcc tttagtggactccccagaggtctttggtttgcatcccaacactgatatcacgtaagtaaaaatgttacgagaatcacatt acattaaggctagaagcaaaaagcctacttcttgagcatattagaatcactttttctagttaacagggagaaggttagta gttatctttacatgttgctgagcattcccttaaaccaacacctaggaaagttaaaacctctgtcttggaataaagcactc caaccaaacagacatgagtcaacccgactgttgttaagcgagtttccacagtcaaatcatttcaaccaagagctctccaa ccctatctctggcgacgccttagcacagcaccttatctggttatctgtcgtttattctggactcaatcttgacctttcac tttgcagttaccaaagcaacttagcgaagtcttgcctggatacgattcttagtattcaaccaaaagatagctctggtggt ggaggagaaacccgcgactctgttgtccagcggttggccgatgatatgctcgataaacttcctgagaactacattgcgca tgaagtaagacggtgtgataaacgcgatactaataatcaaacgctatattgcaaactcgtggtaatttaacattcatacc attcatgtgtgcgtcgcaaatgaaatggtgaagcgcaagctctgatggagtaactattggatatgtttgcgggcatttaa gtcagtgtatacgctggtgaacttatgctcggtaagagctgtacagattattgtctggtagtataatgctggcatttagg ctgtttcgtaaccatcttgtaacagtgcctcttccacgttcgtcgcgtcctgtcgcaaggcggatgttctgtaactttgt tagtgatcttcagtgttatgcatctaacagttgcatccttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntccgccttcc acctcacttcctctttcaattgtttttgcttttgttgttttgctactttgtactcaaaggagtaacgcgttgtacttgcc gtgtgaactctctctctttttcatctttctcctgtccccctccatgtggatcccagctggacgtgttacgcgctacatta ggcatgatatttttctgtggcaaatgattgcgagtgacaaaggggcttaattcctaatccggtttgtctttttactgccg aggaatagattctatcttgttccaaagcccggtggacagaggaccttgggtaccagataagaatttcgtcacactcaccc attgaagtgtcattgtttcttgtagattccatcaaatgtttagataaaagttaatcaacaacaattttataagatacgtc aaccatatttcttgtgttgtctgtgttctctagactctcagggactctcttgattgtatgtacgatgcaaggattcctac tcactggaaaaaggttagcattcacctttcggaaccgcaaattaaattttgcaaactttcccactgttccgcctatctgg aaaagacttggaggattggcccttgtttagggtgcaaaagtgatacccgtgttaaacttacgctcaaatttgaatccgaa gtaacagtcttcatcactttccaccagtaatacaaccggatacgatgtgcttcctgacgttaacgtaaatggtgacccca atcctatatttctatgacggcgtttcatgctgctaagttattgcgttttgaaagcatttcggggttgtaaagtaatatgt gaagatttcttagggataaaccaatgccgcttactaactcgtccgtgaatcatctaactttaacgtgaatttttaggaag cacgagaaaaagactcgaagcaaaaatgttgtatgtcaatggggaaggggacggatttacaggaatctgcattaagtgag ggtgaagttgtcaatgcgcgcttgcgcaatgaacgacttatcgctgt |
Protein
Protein ID | aug_v2a.03861.t1 |
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Definition | - |
>aug_v2a.03861.t1 MFACRSLESKNSGKTGSIKMLQKRPTFLMDMQTLLDTLRKLLLIRSWCPDLTMAQARKYIAESMGANYAENVILDLEKIW EESDCNTPLINFLSMGSDLIEKLTKRHKFDCRAISMGQGQEIHARKLVGPVMQTQRRKYGPLGWNIPYEFNQADFTARVQ FVQNHLDDMDIKKGVSWNTVRYMLGEVQYGGRVWFSESMFQQSFNFYKGYSIPKGTSVPQFMDYIDTLPLVDSPEVFGLH PNTDITYQSNLAKSCLDTILSIQPKDSSGGGGETRDSVVQRLADDMLDKLPENYIAHETLRDSLDCMYDARIPTHWKKVS IHLSEPQIKFCKLSHCSAYLEKTWRIGPCLGCKSDTRVKLTLKFESEVTVFITFHQ* |