Gene
Gene Model ID | aug_v2a.03865 |
---|---|
Locus | scaf1419 : 1359 ... 10310 : + |
To GenomeBrowser | scaf1419:1359..10310 |
Genes list of scaffold | scaf1419 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 1-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus related 1-1. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.03865.t1 |
---|---|
Definition | - |
>aug_v2a.03865.t1 gggatagtttaatcggcttttcaggaaccggggcctgtagggttcggccaaagacaatgatgtcatctagatacactaga cagtctgaccagcacaagccttttaagacaagaaacatggccctcatgaaacatgctggtgcattagtaaggccaaaact taacttgcggaattggtaaagaccgtccggggttgcaaaggctgttttctccttatcttcttccacaacattgatttgcc aatatccacggagcagatcaaggtgagaaaaccactgtgcaccaggtaaactctccaatatgtcatcacaccatggaagt ggatacaagtctcgcttggttaccttgttcagagctcgataatccacacagaagcgttgagtgccgtcaggcttggcaac caaaaccacaggagaggaccacggggatttggaaggctctatgatctgtgcttcaagcatttcctccacttggccgcgca tttcttgccttttatgaaaagggactcttctaggaggtacctgtattggctatgttgatccagtgtcaatggtatgtttc acacctgttgctgagcttaaatcccatggcccccttgaaatgcagtcagcacaggtggatagaacctcatagtgcttacg tttttcctcttccggaactgaatcactgcttatgagaaacatttctttgaaaggaacattatcagcctcagagttttcca caaaaactgcactacactgcctagcccccaactctaccttgacaagttctttagcaccctttacaactttgtaaccctca ctcgcacctttatcaggcagatcacctccatccactagtgggtggaggtctccaacactgctgcagtgataaattttcag aggcttgttgaggcaattaaacacacgaactggtattcgcccatcttttacagttactgcagtccgcaaggctccaacag aatacctttctgagaacttacttctcagttcaaccacacccacacattccttgtgaccactcacccctcaatcacacaag gtatatcagcaaccatatttggtgataatgttacagtttcagcgacggtgatcctgtaaactttatcaagggggccaaac acaatgctattgggatctcctttactgtatacagtgttattgtcaaagttaataatacacttgtgagtcgtgagaaaatc tatgccaatcaacacttgttgtggtaacccacgacatactagcaccttatgttgcgctttaatactaccaagctcaagga tcaacactgtttcaccaacaacatcaagcggcaagttattggccccaagaacaggctttcgtgggggttcaagcttactt gcattagtgttaatacgatgataaatgtcatcactgataattgttgcttctgcaccagtgtccagtaaagcataggacag gacaccattcacacaacacggtataaatgcacctttatatttatcgggcaggatcacttctggctgcgccccacccgtct tcagtctccctggtcatgattaacttggtgaggacaattacggatgaaatggttcagactgccacacttaaagcacgctc tggggccctgaggagactctatacggtcattcctaccttgccttccttggggaatgttcttcagcttttctaaaatttct gcctgttgttgaaagagctgctgagcccatacggggggttctggagtcccctgacgtaaagtaggattccagaaagagat tccatctcttcggacgttgaagaaaggatgtgagcactccctttgcttaacactttttgattcgattcataccgctaagc agccgccagtgcctcatccagggtatttgggcccaaatccagcaccttctcttgtaatgcaaggggagttagggctccaa tgaagaaatctcttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcctcgaagaataactgttaattatcatcttcat acacttataattacagcacctgcacaatagatattcagtggtgctgtttacaactgaatttggttaaagaattaaaatta tacctaaacttatgttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngacgctcattgataggcaagtctaaataaaaatg ttttaagttcttttttaaacttttgtatgttagttattgtataatattatcaggtaaactgttcaggagtacgggtcgag ggacccgtttctcgaaagtcccgaaacatttcgggcgaattttgggtgacacaattctctttgtatcttcaaaacgaagg cgtgtcgaggcacgaaactttgcagttattttaaattgtattccctttacaacatatcaaaagaccagctttacagaata agcgggtcgcagttttagaaatggcttttcgggcccgaaacgttttcgggactttcgagaaacgggccgcagatatgaag aaagccctgtctccaaacgttttggatttagttaatcctactctgtgtatgaacatgaaacacatgtatttgaactgcag attcaaggaatttcggtgtccagttgttagtcatctaccagtactattataaagtccaaggtaacatcaaagttgttcca aacgttctttttgtgactttcttccacagcagcagcagttgcagcacaatcaacaacaactgcagcaaggtccacagtca ccccagcattcctcaccacaaaacccatcgccaccaagtacgcagctcacacagacacagtccactcagggcaggatgtc gcctgcacaagcaccctcaagacctcaagcattgtcaccccacaccgagtccatctggggagcagcccagccccaaccaa cgacaacacgtaagttgaacctatcagatagagaatgtagatccagcgatattgtcaggcgtagataggcttttatgtgg acgtagcgcagtagattgggttatagagcttttgattgcgaggtcttgggtcgagacctgggacctgtttcccgaaagtc ccgagaacttttgcgggcccgaaaaggtagttgtcaaactgcaatctgcttgttttgaaacgctaatcttttcacatggt tttaatttaagaacaactgagaggatttcgacctttgatggctcagaaccaaggcgttgctaagatataaaaggaattgt gccccccgaaataggctcgaaatgttttttgagaaataggccactgcaccagcctaccccgggatggagtatctttctgt tttaagtggtggcgggggatggtgacaaaagtactaccagtgacttcttgccatggaaaccaggtcagcttcgaccgtgt gagccagtggctcatgtgcgactttgccttttgcgttgttcaatcgcgtgcatggcaaagaatacatgggaccaccgtcc cgaatattgacgtgaatttatgacagaaacgaaacaaatagaaaaccgtgccaactttggacaagaatgtgaggtgatgg gcaggattgttgtttccgcgaaaatttgtggaaaaaaccttcacgctgtgaagttctctgtttttagtaacttttatagt ctaccactgtactgttggttattcatgttttacattggagcctcaactctcagagctgtcacttcaatcattatgggttt ttaacttgccagatgcagctgtttcgagaaaggttgtccaaaaaaagtgcataagggtactgtgcgaaatggttaaattt aagcattccctgactccagcatttcaattgaatgtaagaaaatgtcatgacacactataggtatgtgtttgcaagtatga aagaaagttagacaccttcagtgcgtttaaacgagttgatcatgtcccaggttaccttttcggaaacattgcgtgcacct ttacgctcgataacctttctcgaaacagttttatatgcgtagtgatgcttgctttgattcaacctttgtctgtagagggt taatttttctctccctccgtagccgtgatttcacctggtccattgtttccaacaactacatcagcatctagtaaaggatg ggacagagaaaacagccctcaaagcgttccatcatttgaagaaattcaaagaatggaagaagaaaaggaaaaacacgcaa gggtnnnnnnnnnnnnnnnnnnnnnnnnnnnncacacacacacacacaaaaacacatgtgtctcatttccgaaataagtg attctgcagtatagatattcgcaaaatagtcatcattgcgctagtgtgtttttttaagtgacgttctatctgccgaagcc gttgtggctgcttaaactctccaatattaagcaaccacgagggcgaccagaacgtcgtaactttgggtatttaagcaacg aaaaacagaagttgtgcacgctctagagagttacttttttttttattctcgaacctttcgtgccgttttcgtcatttcct cgacgtggaatgatgtgttttggagttgtgtggacgacatgagcgctcgatgagaaactcatgttttgattccatcttcc agccgctcgtatcagtttaattccagggtagttagcaaacgctttgtacactaaaggaacaagggaattaatcaaggaat gattacagacatgcgtagctacattttcagatgacgttctggccgtcttcgacgttgtccatgcttaagctcgctagtga taagtcttcnnnnnnnnnnnnnnnnnnnnncagaaacaactagaggaagcaagaaggaaacaagaagaagagatgaggag aaaacaagagcagctagagacgcttcgaaaacaagaacaacaaagacagcttgaaatgcagaagcaccaggaagataaga aacgaatgagtgacttacgccaacagcaacaacaggccctgtttcgactgcaacagcagcaacaggaattattgaggaag aaagacatccaacagcgcgagctgcaacagaaactgcagcaaaagagacaggagagtcaagtaagatcaaagaatttttg ccacgtcgttatgatttgaaatcgaatggggaaagcgtaaaccaggttgtttctctggccaatcacaaccgacacgcaca accaaatgaatcaacggtaatagctgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnntgcagtgttcttcttttcaggccgtaaccggtaaaatttaccgtctctaacaacacttgaaattgtaaagagttc aaatggtgaaataaaaataaacatcggcatcgcagaggttatgggttctaatcccgttgtagacacctgaaatttttcag gagcacacttcaattcatctctaaatcatttctttcagtaaaaataatgatgttcgttttaccaaacgcggagccttgaa ttcatggagaaaatagaactatctgtgctaagtgagctaaaatgaggcaaatttcgcttccatataatgcactgggcaga cgtaataagcaatgatgcttgcaactgctctgccagttcggaaagctgtttaaccttttgtgctgctaaaagagagaact ctacttatgtgacttcaaagatagctgtcatgccgagaaaactgacacgaaagaaaagacgcttacacgacatctctttt gcaggcaactggggcttcgctgtggggagcgccctcttccgcatcagggaccttgtcacttgcacagatccaacaacagg aagaacgagaatggaaacaaagagagctgcaagtgcacgtccaacagcagcgagaacagcaagccaggggaaacccgggc tgggccgacagacgggtgccatcgaatccgccccccgtcaagtctttgctgcagattcaacaagaacaggcccagcagtt ggaaaaaagacagcacggcgcctctctttcaagatcgcaggttcggtttaagggtcgcgtttgtttcgtacgcttgccag ctcactaggcatgaccccttgaggggcctcagcgttgttgtcaagtaccgtaaacttgagaagtgcatgcacgttgtctt ttggcagactacatcatagaaatgtgctttaattcatgttgcacgtgcggcacgcttacaaagttgtcgtacggcacgat tacaaaattgtcgtggggcacgtgcagcatgatttttcttccccattcaaccaatcagatcattggtttgtgacgttgcc ttcgtttcttcatatctaacgccagacgccccgaaaactatacgaccagtgatctaataattgaagtttggtttctcctc tagcccagccataatcccttaagttcttcagtgtgggggaatactggcggttcgctgtcagcaacctggggaccaagtag caattctggcaacatctggggtacgtcaccctccaaaccgccgcggccgccgcagccgtcttttgttgatgacgacgacg atgatgatagcgcggacgataccaatgtggagaatttctgggaagatgctgtcaaggctgcgaacaaacagcagtctact ttccaacagcgacagcaacctcctacacacgctaggtaggcaaactagcgatgaatctctaaattctcttcatactgttg taactgtatcatcgatgatagtaactggcgaggaaaaggcaagcgaacgcgccactttcttctggtacgtatcgttcaca ctgcctactggtcttccttccttcgcaaggatttgaacaatcattttattcctgaattctgaaaggtttcagtaaacaga tgacgccacctgcttaacaaatagatgccatgttgccttgcgtctggtcagcaatagatcacagatgacgtc |
Protein
Protein ID | aug_v2a.03865.t1 |
---|---|
Definition | - |
>aug_v2a.03865.t1 DSLIGFSGTGACRVRPKTMMSSRYTRQSDQHKPFKTRNMALMKHAGALVNCSGVRVEGPVSRKSRNISGEFWQQQLQHNQ QQLQQGPQSPQHSSPQNPSPPSTQLTQTQSTQGRMSPAQAPSRPQALSPHTESIWGAAQPQPTTTPVISPGPLFPTTTSA SSKGWDRENSPQSKQLEEARRKQEEEMRRKQEQLETLRKQEQQRQLEMQKHQEDKKRMSDLRQQQQQALFRLQQQQQELL RKKDIQQRELQQKLQQKRQESQATGASLWGAPSSASGTLSLAQIQQQEEREWKQRELQVHVQQQREQQARGNPGWADRRV PSNPPPVKSLLQIQQEQAQQLEKRQHGASLSRSQPSHNPLSSSVWGNTGGSLSATWGPSSNSGNIWGTSPSKPPRPPQPS FVDDDDDDDSADDTNVENFWEDAVKAANKQQSTFQQRQQPPTHAR* |