Gene
Gene Model ID | aug_v2a.04211 |
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Locus | scaf1542 : 30699 ... 38275 : - |
To GenomeBrowser | scaf1542:30699..38275 |
Genes list of scaffold | scaf1542 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Tubulin Domain Containing Protein1 |
Study field | Flagellum |
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Gene name | Adi-gamma-tubulin |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapiens gamma tubulin (AAF34188). THis is an axoneme related protein. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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tubulin gamma-1 chain | GO:0000086 GO:0000212 GO:0000242 GO:0000794 GO:0000930 GO:0003924 GO:0005200 GO:0005515 GO:0005525 GO:0005814 GO:0005827 GO:0005829 GO:0005881 GO:0007020 GO:0008152 GO:0031122 GO:0031252 GO:0031513 GO:0036064 GO:0045177 GO:0055037 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.04211.t1 | gi|156361293|ref|XP_001625452.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.04211.t1 | gi|597751558|ref|XP_007237662.1| | PREDICTED: tubulin gamma-1 chain [Astyanax mexicanus] | 0.0 |
aug_v2a.04211.t1 | gi|556971357|ref|XP_005994087.1| | PREDICTED: tubulin gamma-1 chain [Latimeria chalumnae] | 0.0 |
aug_v2a.04211.t1 | gi|573900937|ref|XP_006638196.1| | PREDICTED: tubulin gamma-1 chain-like [Lepisosteus oculatus] | 0.0 |
aug_v2a.04211.t1 | gi|524870882|ref|XP_005092221.1| | PREDICTED: tubulin gamma-1 chain-like [Aplysia californica] | 0.0 |
Transcript
Transcript ID | aug_v2a.04211.t1 |
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Definition | - |
>aug_v2a.04211.t1 aactaccgctgacaacatgtaaggaattgccgccatcctgccattttcgatgttacagttcgtgtgccatgtgtattttg agtcatagttctgcataaatcatccaaagtttatagagaatgcctcgggaaattataactcttcaaattggacaatgtgg gaatcaaagtaaggtttagtttccatttctcttgtctctggttatttgttgtagaccttctttcaacttgcacttttgtt tccttaactgaatgaaatgatggcttattttttcccattgtctatcgatagttggaatggagttttggaagcagctttgt gctgagcacggaataagaccaggtgaaaatgagctgtgatcacctgttgtaccctgttcggtgttattgtccattaacaa tgattaataatctcaacttttattggctaaggtctggagatggtcatgagactacctaagctcatgtattatatacaata ttgcatgctgtgtatttaaaattgcaccaaaaacatagcttcagtgaattgcttcagtttcgaataatttgtattttgca gatgggatccttgaagactttgctactgatggcactgatagaaaagatgtgtttttttatcaggtatatatggctgccga tttagggtctagggttaaaaggacaggaatgtggcatgacctaacctgacctgacctgcattgcctgtaacatatattaa cttttggaaatctggtattatttaaatcatttaactttgaatttattgcactcagttttatcattgttattattattgtt gttatgtatagatttcacagcttatggctggagattttccttttcactgagggcaggttacatctcataacctcaggcct ccagtacttgtctgaggaggcgcgctgtgccgaggagagctgctttctgtaagagctcaatccatgtggtcacaccaatt gcatccaggtgtttagaaaggttgggtgtgacagcgcctagcgcaccaaccacaataggaacaacttttgctttgacatt ccagagtcgtgccacctctcttcgtagatcttggtagttttcaactttctccttctctttctcaatgattccagcatctg cagggacggcaatatcaataatgttgaaggtctctttctccctgtccactacaaccacgtctggtcttctcgcttggatg taagtggatgtctggatgttaaagttccagaggagtttaacatgatcgttttcaattaccccttttggtttatgctggta ccatttgcttgatacatcaaggctgtatgagtgtgtaatgttccagtggatcatcctagccacattatcatgcccaggtt tcttattagaagccgggtcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaaagatcttttac aaaacaaatgagtactagtggtctcagtcatcaataattattattattattgctgtaagagtctttgttacataaataat ggcatgtcacaatgctctctttctaggatgaaatagtaaaataatatgtttttgtatctgagttactgaatagcaagagg gagtatgtatgtattaaattccaaatctaggaataactaagtggttaatctacaggctgatgatgaacactacattccaa gggctgttttactggatttagaaccaagggtgagtggattctatgtttattaagctgtaactaagaatcgtgatagaatg aaaagtgttattgttaattgatcacatctatcattctcatgaaatagtggcagaaggttcatgagggacctggcactagg caaatgaaatagctatgaatttgacctctgatttctaggctcttttcattgtggtctttgacactgcttaacattgcatt gcttctggtatttcaatggaagggtttatatatctaatttttttatttgttgctcaaggttatcgatacaattacctcct cgccatatgctaatctgtacaatccagaaaacatgtatacctcaaaacatggtggaggtgctggaaataactgggccagt gggtattcacaggtttggcacttgttcagtttctgttatacttgtttgaattaattggtaaactattgttgagttttggt tcaattaatttcaggctgaacgccttcatgaagaaatgtttgatattatagacagagaagctgatgggagtgacagcttg gaggtattttgagagaatcaagagaaatcaaagtattctaatggttattccagcaaaaagtcttaaaacaaacttgcaca atagggaagttattttaatctttgtttgtgtcttctttacagggctttgtgatgtgtcattctattgctggtggtacagg atctggcatgggttcataccttttggagaaacttaatgataggtacaattattgaaattttgtctgttgcctacagcagt tttcccagggttaactacaactgataaaattatgatattcaagacaaaataatgatatcttttacacttattttgcacag gtttccgaagaagttgatacaaacatattcagtgtttcctcagcaggtacgtttagaggccatctaagtgtgactggttt gactttattgtctcattcttgatcttaattgaatgcaagttaacctttaggcaattgcttatgatctcttctttgacagt tttggagtaaacactgttccttgaatgtagctaggctagaatattatttnnnnnnnnnnnnnnnnnnnnattcaggacta cttaaagttaggtgctgtactaatagaaactatattctttatgatgtaggaggacttcagtgacgttgtagtgcagccat acaattcaatactaacactcaagcgactgacccagaatgcagattgtgtggtcagtggaactctggaatgtataagagag tgcatatttaggcattttcctagtggttttaatgctgcagtaattcattatcatttctttcaaaggttgtacttgataac actgcattaaacagaattgctgcagacaggcttcacattcagaatccaacattttctcaagttaatcagctggtatcttg tcattattaattttttttcatgtatacattcttttggtgcaaatttttgttttttgttttttcttgatttctgaagtcaa tttttttgcagttactttgttttttcttgccactcttctatttaggtttccacaataatggccacaagtacaacaactct gagatatccaggtgtgatataactgacatcattcttgcttnnnnnnnnnnnnnnnnnnnnnnntgtttattttgccattt aaccacatcaaagaaacaaaatataaatgaataaataaataacgcaatacactagaaactggtagaaattgaagacaata gactacatttgtttaaggtggtaatgacaaggaagcccataaagaagccaagggcttataagctatagcttcctgaaaat atagggtacatcatacaaactatgaggacagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaatag tactggccattaacatgtgaaatgcttatttcaggctacatgaacaatgatcttattggtttgattgcatcacttattcc cactccccgtcttcatttcctgatgactggttacactccgcttacaactgaccaaaaggtatcattaaatgtcttactaa gtctttggtttgtcattgttcaatctttctatggtgatgtggattgttattttcttgtattactcttttaggtggctaat attcgaaaaaccactgtgcttgatgtcatgagacgattgttacaggtataaatctgtattttgtctacagtatactctac actcaattttttgcctttgcaaaatacaaatgaacaataatatgggttcatggtaagccttaatctggcaaattgtgatt ataaaaggttccacagtgcaaccttggtgcagttcaggttgtttggagttcatcagtaaattaattaagagaagattaag aggctggaggccataccaataatgatactattggaatggcccccagcctcttattcttacagcaaattgctgtccataat agtaattattattaacagcaatttgctctagttaatgtacacatagattttcaccttctgcttttattcttttgtagccc aaaaacgtcatggtttcaaccttgcgagacaggaaaaatagtcattgttatgtttctattctgaacattattcaaggaga agtggatccaacacaggtactgtatgttaccagaagttcaacaactgagtcacacatttcaaatttgataatacagtggc agttttagctgtgatttctgaatgatttgatttgagtactctcttgtatccaaggtccacaagtctcttcagcgtatcag agaaagaaaacttgctgagtttattccttggggtcctgcaagtattcaggtatgtctatccttgcaagtacttcatcaca tttcctttcttatgtctgtacattttagaattttgcatttcaaaatttttaatctttaagtattcacaaatcaaaaacct catgcaatgttttcagttattgctgttttccttcccactttaggttgctctgtccaggaagtctccatatgtgcagacag cacacagagtcagtggtcttatgttagcaaatcacactagcatagccacagtaagtttactttccatgtgggattttgca aatgtcttattaggtccattttcatctctttaaatgttgccaggtcaaacgctttgtttgagaaaatttttcttctcagt atcagcttacacacagtttcagtgctcacaaagaatgagtcggttagactctttttcgggcaaaatatcatcagtcaatt acgaaatcatgtatgcagcatgatttaattggtaaaatatctgacacaaataatttgaaacaaagtcgtcaatggtccga aaaccctttatagataaatcggatatcatgttcttttgttagcaaactaaatatgtttttttcctgttatggaagaggcg tgaacgtttaaagaattccaagactcagagcaaaaacctaaaattggaatctcaggtttatgttcttagtcttgcagctc ttttaacgttgctgttgttgtctgtataacaggtcttcgaaaaaagctgtagactttttgacaaacttcgaaaaagagaa gcatttttggataactacaaaaaagaggagatgtttaaagataatctggatgagtttgatgcgtcaaggtaacagttaac tactcacttttactgccattgaaaagaaatgacttcggtggttgtatttaccgtgtccaattttgagtggccaggcggtt cataagtaatgaagtagaggtcatgtgacaaaactgtttcggtcactttatcaaacaagtgtcagcaaaggaattttcct tatctttgcctcgatatttccgttatctttattctaacgtcctattcgacagctttttagcgcaagcgctttttagcaac gtactataatcgcacgaggtgattttgttttgctgttacctcatcctttgtcaagtgtcgttactctcgaagagagaaaa tgttagaaaattcgaggcaaaccatcaacttcctgtagcgtcggtggctcttatatatgcatcccgatcattaccgcata taatgagctttaatgtatacggttttttgagcatccatgatcgaagataaccaactcagtcctcttacttccacccatag acgttgaggccggtgaaaagtactttgttcttttttgtgttttgttttaacaggcaggttgtcgaacagttgattgaaga atatcaggccgccacacgagctaactatatcatgtggggaactcaacaacaggttggctgggattgcaccggctcaaggg ctgatgtactcgccttgttttagaataattgtttcatctgcataaatctctttgttagtattgtctcgtctgagttaaac tatttgttctttatttgcctacagggagcatctggaggagacgtttctaaagtttagtgttagggttagagaaaaagttg cttgttccgtgccgctctgtgtgcattcacttcgtaaggcaaagtaacttctgtgctgtggctcgccaaacttggaacca gccgcttagacaagctccttggtaccccagtcatatccacctggacgctcgacagggtgacaaaaatataaattagaaaa caaagaggtatatctagatgtaaaattgcgttattccgattctgggttggtaatccgtttaaatggccgcaaataaagtg ttaaatgggtattttcacccatctgcatttgacaaaactaaaatgtaacaccatcggacgttaaatgctcaatgtaatca tcgtatgatgtaatgctttgactcgactgatggcaaataaacttttgttgcggagtt |
Protein
Protein ID | aug_v2a.04211.t1 |
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Definition | - |
>aug_v2a.04211.t1 MPREIITLQIGQCGNQIGMEFWKQLCAEHGIRPDGILEDFATDGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIDTITSS PYANLYNPENMYTSKHGGGAGNNWASGYSQAERLHEEMFDIIDREADGSDSLEGFVMCHSIAGGTGSGMGSYLLEKLNDR FPKKLIQTYSVFPQQEDFSDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLHIQNPTFSQVNQLVSTIMATST TTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQKVANIRKTTVLDVMRRLLQPKNVMVSTLRDRKNSHCYVSI LNIIQGEVDPTQVHKSLQRIRERKLAEFIPWGPASIQVALSRKSPYVQTAHRVSGLMLANHTSIATVFEKSCRLFDKLRK REAFLDNYKKEEMFKDNLDEFDASRQVVEQLIEEYQAATRANYIMWGTQQQGASGGDVSKV* |