Gene
Gene Model ID | aug_v2a.04218 |
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Locus | scaf1542 : 85723 ... 86761 : + |
To GenomeBrowser | scaf1542:85723..86761 |
Genes list of scaffold | scaf1542 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-Twist |
Description | Named thus based on a BLASTP result against NCBI nr and molecular phylogenetic analyses (NJ and ML). Adi-Twist, Adi-Orphan-HLH-k, Adi-Orphan-HLH-l and Adi-Orphan-HLH-m are aligned tandemly in the genome. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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twist-related protein 2-like | GO:0003677 GO:0005634 GO:0006355 GO:0014029 GO:0046983 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.04218.t1 | gi|156389412|ref|XP_001634985.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.04218.t1 | gi|683936761|ref|XP_009097273.1| | PREDICTED: twist-related protein 2-like [Serinus canaria] | 2.00386e-43 |
aug_v2a.04218.t1 | gi|726997441|ref|XP_010389003.1| | PREDICTED: twist-related protein-like [Corvus cornix cornix] | 2.00386e-43 |
aug_v2a.04218.t1 | gi|543295435|ref|XP_005430163.1| | PREDICTED: twist-related protein 2-like [Geospiza fortis] | 5.00264e-43 |
aug_v2a.04218.t1 | gi|669274127|ref|XP_008629182.1| | PREDICTED: twist-related protein 2-like [Corvus brachyrhynchos] | 5.99756e-43 |
Transcript
Transcript ID | aug_v2a.04218.t1 |
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Definition | - |
>aug_v2a.04218.t1 ttgtgactgacggtgggtcgagctacggttgattgcttcatactagtctactagactcttcagacggttctttcaagact gaaaatctacagaataccagttgaaaatgggattaccgcgttacgagaagcctctttcgctggatgaacccagaagaagg tacagatcgaatcctggtaattcgaaagcaaaacgcaaagatagttccctaactgaaagcaacgggaaaggggatcaaag aacggtcgcaaacgtgcgagaacgtcaaagaacgcaagcattaaacgaggcgtttaacaagttaaggaagatcataccaa cactaccttcagataagctctctaaaattcaaacactgcgtctggcagcgcgttacattgatttcttgtgccaagttctg ggcaataatgaaaaacatcccagctcagcagcgagtagttgttttattgctcatgaacggctgagttatgcctttagcgt atggcgcatggagggtgcttggtttcagcaacagtgataacgtactaatgcaggatgatacttcgctttgaattgtataa ctggaagtcttccatgaacattggaccgcatacaagaggacggacggagttggagctgggtatctctcgtcgtcggacta ctgggagaaactcaacgtatttaatgctaaaacaatgacctgtcgggagctttcttgagtgaaaacgcacatagtgtgat tgttatttttaaaacagaaccatactgaagaggacgtgtgtctccctttgcaagcggcagctcaatttaatcaggcacac tccacttcaaacataaatgatagaagaaaaggacaaaacgaattgatttcagagttaaccccaatgcggcggccaaggta gtatcaatttataccattgcgggatactttttatgctgtaatagttatgtcatggcctaatttgtccaagggtctagaat aaactttcaaaaaaagtcaagagatagcatatgtatagcttcggaaagcactagtgtttcataaataaatagttggcaa |
Protein
Protein ID | aug_v2a.04218.t1 |
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Definition | - |
>aug_v2a.04218.t1 MGLPRYEKPLSLDEPRRRYRSNPGNSKAKRKDSSLTESNGKGDQRTVANVRERQRTQALNEAFNKLRKIIPTLPSDKLSK IQTLRLAARYIDFLCQVLGNNEKHPSSAASSCFIAHERLSYAFSVWRMEGAWFQQQ* |