Gene
Gene Model ID | aug_v2a.04977 |
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Locus | scaf1835 : 62364 ... 65905 : - |
To GenomeBrowser | scaf1835:62364..65905 |
Genes list of scaffold | scaf1835 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 57 |
Description | This gene model contains zf-CCHC and RVT_2 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.04977.t1 | gi|514683802|ref|XP_004989482.1| | hypothetical protein PTSG_12850 [Salpingoeca rosetta] | 5.99756e-43 |
aug_v2a.04977.t1 | gi|590609766|ref|XP_007021628.1| | Uncharacterized protein TCM_031677 [Theobroma cacao] | 9.99995e-41 |
aug_v2a.04977.t1 | gi|694325747|ref|XP_009353805.1| | PREDICTED: uncharacterized protein LOC103945027 [Pyrus x bretschneideri] | 2.0e-39 |
Transcript
Transcript ID | aug_v2a.04977.t1 |
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Definition | - |
>aug_v2a.04977.t1 ttatgagagcattacgccagccaaagtaaaccgcgaataataatgctttacactgagttgacgttgctcgagaggggaac gaacgagacagttagagagtacttgattagggctgaaaaggcaatcacggctctcagaaacgccaaggaaaccctcagcg atggattgatcatagccatgatccttaaaggactaccagaatcttatataccacttgcaattcacattacccaaagcaca agtgaaataacattcaccgagttcaaagtccagctgggaagttttgaagaaacagagaaattcaacacgaaagcgaaagc agatcaagtgatgaagacagtatccccaacatcctcagtatgttatggctgcaggcaaagtggtcattttgttaaagact gtccgggaaaatctgaggccacgaagtggtgcagttatcacaagagcatcattcacactgacggcgaatgcagaaggcac aaccggagggacagaacaaaacaagccattttcagcgaacaaaccaaaaccatcgaaggggaacattcctttgcttttca tgtcgaagatcatacaaatcgacatcatagtaatccgacaggagtactgcttgacacaggagctacatctcacattgtca caactaacgcttttacaagagtcaatggaactttcaaaccgcaggaacattgcatggagttggcggatggaacgaagact atgaatgtggcagtcaaacgaggagatgcagaggtaacactgaaagatgtgaatggaaggtacgtcaaaattgtgctgaa agacgcattgctcataccctcgtaccctcaagatatcttctctgtgaaagcagccacatcaaatgcagcagaacttaagt tccaacaaggccataacgaacttgttcataaggatggcaccacgttcgcaatcgaggaacatggtcagttatattatttg aacactgttgaaccgtatgataacactagtgataaggtaagcgtctcgcatgacatccacacatggcatgaaatattagg ccattgcaattttgaagatgtcataaaatcacaaggagtagtagacggaatgaaaatatctggtagctcagataaatcta agtttaattgtgacacatgcatacagggaaagtttgttaataatagaaatagaggaccagatgctagagctacaaaacct ttagaaatggtacacacagatttagctgggcctattgatccagtgtctaaagaaggctttaagtatagcattgctttcac cgatgatttctctgggaccgtatttgtttacttcctcaaaagtaagagcgatactgtataagcgacagaaacattcatgg ctgactgttcgcggtacgggcaagtaaaatgcatgaggtctgacaatgggacagaatttacgagcgatgccttccaaatg ctcctaagggaaagaggcataaaacatgaaacatcctccccttattccccacatcagaacggcactgctgagagacactg gcggactcttttcaaaacaggtagatgtttactcattgagaagcagttgcccaaaagtatgtggccgtatgccattcaga ttgctgcccacattcggaacaggtgttataacactaggataaagaatacaccctatttcatgttaactgagcgaaaacct gaccttcctagaatgagagtatttggatcagaatgttacgcatacaaccacaatcataagaagttagactcgaggtgtac aaagggggtgtttgtgggctatgataagagtagccctgcatatctggtgtatcacccagataatggtaaggtcatgaaac acagacttatcagatttattagcaaagacagtgtagaacagcaaatacaaactgactggctgtatgaagactcagattta tgcaaatcaccagtaagtgaggctgaaacagccaaccctgactgcaacgttgacacgaacaccccaactggtaaagacca aaacaagaggaatgtggtaacacatgaaaatgatgaacaggttgcaagtaaccctgttcaggctagaaggtaccctctaa gggaaaggaatcccccaaagtacttagctgaattttatactgaccaaaatgatggtaatgatttgaccaataacagtact gattattgttataaggtttatggagtaccacaaacatatgcagaggccatgaactcgcctcgtgctactgagtggagaaa ggcaatggaagaggagatggaatcactcaaagagaatgatacatttgagttaactacgctgcccgtgggtaagagcccag tggggggggggggaatgggtctacaccatcaaagaaaatgcagaagggtctgaaacacttaaagccagatatgtagcaaa aggttatagccaagtagaagggatagactaccaagaaaccttcgcaccaacagctaacattgcctcagttagagccctta cgcaattggcagcacaatacaacctcacagtccaccagatggacgttaagactgcatatttacatgcacctatagaccag gaaatatttatggaccaaccagagggctttgcaacaatgtcggggaatgaggagaggatggtttacaaattaagaaaatc cctttatggcctcaaacagtcaggcaggaactggaataaggtattacataagcatctagtgggggctggttttgacagaa acccagtggaccattgcatttatagcaaacaggtaaacaacaacctaatcattgttcttattcgggttgatgatttgatt gtagcatcagacgacatggatttaatgaaccaattcaaagaaggcatgaagtgtcagttcaaaatgaaggatttaggtag aatctcgttgttcctgggtattgatttcgatcagtcttgtgggatgattaagatgaatcaaaagcgatacattcttaaga tgctcaacaggtttggaatgaaggattgtaagcctagagcaactccttgtgagcagaaattagggtgcgacaatgattta atggctgaccccaagaagtatcgtgagattatagggagtttaatatatgcgatgatttgcacaagaccagatatcagctg gactgttagtaaactctcacagaaattgtcctgccccagagaggaggacatggtagctgctagacatgtcttaagatatc ttagaggtacaatagactatgagttgtgctttaagaaatgtgatggtaatttgaacctagttgcttatagcgatgcagat tgagcatcctcgttggaggatagacgaagtaccacagggtactgttttagcttatccaaccacggcccccttatatcatg gacatcgaggaggcaacctactgttgctctttccacttgtgaagctgagtacataggtatggcagctacagcccaggaaa gtctgcacttaactcagctattaaacaacataggaagaggatcatataaagccaccaagatctatggggacaatcgaggg gcaatagatttaagtaagaacc |
Protein
Protein ID | aug_v2a.04977.t1 |
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Definition | - |
>aug_v2a.04977.t1 MLYTELTLLERGTNETVREYLIRAEKAITALRNAKETLSDGLIIAMILKGLPESYIPLAIHITQSTSEITFTEFKVQLGS FEETEKFNTKAKADQVMKTVSPTSSVCYGCRQSGHFVKDCPGKSEATKWCSYHKSIIHTDGECRRHNRRDRTKQAIFSEQ TKTIEGEHSFAFHVEDHTNRHHSNPTGVLLDTGATSHIVTTNAFTRVNGTFKPQEHCMELADGTKTMNVAVKRGDAEVTL KDVNGRYVKIVLKDALLIPSYPQDIFSVKAATSNAAELKFQQGHNELVHKDGTTFAIEEHGQLYYLNTVEPYDNTSDKNG TAERHWRTLFKTGRCLLIEKQLPKSMWPYAIQIAAHIRNRCYNTRIKNTPYFMLTERKPDLPRMRVFGSECYAYNHNHKK LDSRCTKGVFVGYDKSSPAYLVYHPDNGKVMKHRLIRFISKDSVEQQIQTDWLYEDSDLCKSPVSEAETANPDCNVDTNT PTGKDQNKRNVVTHENDEQVASNPVQARRYPLRERNPPKYLAEFYTDQNDGNDLTNNSTDYCYKVYGVPQTYAEAMNSPR ATEWRKAMEEEMESLKENDTFELTTLPVASDDMDLMNQFKEGMKCQFKMKDLGRISLFLGIDFDQSCGMIKMNQKRYILK MLNRFGMKDCKPRATPCEQKLGCDNDLMADPKKYREIIGSLIYAMICTRPDISWTVSKLSQKLSCPREEDMVAARHVLRY LRGTIDYELCFKKCDGNLNLVAYSDAD* |