Gene
Gene Model ID | aug_v2a.05330 |
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Locus | scaf1956 : 24940 ... 26185 : - |
To GenomeBrowser | scaf1956:24940..26185 |
Genes list of scaffold | scaf1956 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Actin Domain Containing Gene6 |
Study field | Flagellum |
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Gene name | Adi-actin8 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Chlamydomonas actin (XP_001699068). The C-terminal part of this gene seems to be missing from the model. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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truncated actin-4 | GO:0001895 GO:0005200 GO:0005524 GO:0005634 GO:0016020 GO:0030016 GO:0031941 GO:0042802 GO:0045214 GO:0070062 GO:0070527 GO:0072562 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05330.t1 | gi|684409690|ref|XP_009175831.1| | hypothetical protein T265_11027 [Opisthorchis viverrini] | 0.0 |
aug_v2a.05330.t1 | gi|525328817|gb|AGR44872.1| | truncated actin-4 [Bombyx mori] | 0.0 |
aug_v2a.05330.t1 | gi|525328807|gb|AGR44867.1| | truncated actin-4 [Bombyx mori] | 0.0 |
aug_v2a.05330.t1 | gi|525328767|gb|AGR44847.1| | truncated actin-4 [Bombyx mori] | 0.0 |
aug_v2a.05330.t1 | gi|525328771|gb|AGR44849.1| | truncated actin-4 [Bombyx mori] | 0.0 |
Transcript
Transcript ID | aug_v2a.05330.t1 |
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Definition | - |
>aug_v2a.05330.t1 ttcagttgaatcacactgcaatccggcaaaattgcaaagaatctttcttttttttaaatttcaaatttcaaaatggccga tgaagaagttgctgccttggtcgtggacaatggatccggtatgtgcaaagccggtttcgctggagatgatgctcctcgag cagtgtttccctccatcgttggccgtccaaggcatcagggtgtgatggttggtatgggtcagaaagactcgtacgtcggg gatgaagctcagagcaaaagaggtattttgacactgaaatatcccatcgaacacgggatcgtaaccaactgggacgacat ggagaaggtaacacgcgatttcatttcgattaaacaattttgagctattttctgataaatttattcaattaacagatctg gcatcacaccttttacaacgagctgcgtgtcgcaccagaagaacacccagttttacttacagaagctcctctcaacccaa aagcaaacagagaaaaaatgacacaggtaagaaaaaaaatgcttataatcaaatctagtcaaatatcataattcacatcg attgcttttcggtgcacagtttagatttttcgctataacttccgacccgcaattctaaactttccaaaaacatggattgg atgaaagatttggcttttgacagagccgtctcgttaaaataaaaacaaattacaacttcattgaatagccataatgaaca acagcttacaaacattattcctcgcctgaaagatgtgcaatattaaaagccccacccgttgaaacgagtgattttttgtt caaccgggcatagcaaactccagacttacacgtgccatttttattgacgcgtgaaatgaggcgattcattcaatgacaca cgagttttatgcttcaccagcttcgcaaaattttcaccatcgaagattttaccttcgagttattcagttccgacttttaa tttgtctgaggacgcagtagtgtccaactatgattaagaaaaacaatagctgtttgcttcttcttttaaactttaatagt acaagtgttttgatgtttgcccacttcaatatgatcaaaaggatctcttcccaaatatggtaacacttgaccgtaattgg tcagattaaacatttctgtggatttcgaaatcgatgatgcaacgatgtggatgcgtctgtactcgtttagctattcacag tcgaaacaaagacgtaaagatatcagaataattaacattttttaca |
Protein
Protein ID | aug_v2a.05330.t1 |
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Definition | - |
>aug_v2a.05330.t1 MADEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQYKCFDVCPLQYDQKDLFPNMVTLDRNWSD* |