Gene
Gene Model ID | aug_v2a.05332 |
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Locus | scaf1956 : 33469 ... 43985 : - |
To GenomeBrowser | scaf1956:33469..43985 |
Genes list of scaffold | scaf1956 |
Manual annotation
Study field | Cytoskelton |
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Gene name | Actin Domain Containing Gene7 |
Study field | Flagellum |
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Gene name | Adi-actin4 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Chlamydomonas actin (XP_001699068). Since Caldesmon domain and Alpha-L-fucose domain are found in the N-terminal region of this gene model, this may be an (artificially) fused model. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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cytoplasmic-like isoform x2 | GO:0000281 GO:0002119 GO:0005200 GO:0005524 GO:0005865 GO:0005884 GO:0005938 GO:0006898 GO:0006915 GO:0007126 GO:0007517 GO:0009792 GO:0016887 GO:0040007 GO:0040035 GO:0040039 GO:0045121 GO:0071688 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05332.t1 | gi|47550921|ref|NP_999634.1| | actin related protein 1 [Strongylocentrotus purpuratus] | 0.0 |
aug_v2a.05332.t1 | gi|699254136|ref|XP_009861333.1| | PREDICTED: act protein isoform X1 [Ciona intestinalis] | 0.0 |
aug_v2a.05332.t1 | gi|676421270|ref|XP_009043797.1| | hypothetical protein LOTGIDRAFT_202971 [Lottia gigantea] | 0.0 |
aug_v2a.05332.t1 | gi|676492678|ref|XP_009065998.1| | hypothetical protein LOTGIDRAFT_205506 [Lottia gigantea] | 0.0 |
aug_v2a.05332.t1 | gi|115918029|ref|XP_001176242.1| | PREDICTED: actin-15B [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | aug_v2a.05332.t1 |
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Definition | - |
>aug_v2a.05332.t1 tcacagtttcgcttcattgatcattcagagatatgggtaagctgttcttctgttgccgttaatctaactccaccttgtgt cacttcgaattaacgatgactaaaggtttgtcactcttgattcacgttttactgggaactcaaatactgggcgttttgct ggaaggtgaggctgcgaaatcttcggcgcacaagaggaagacagaatacaattacaatgatggtaaccacataaaacgaa agagcaacactcatggaaagataaaggaggagcacgaaaacggacaagtatcaaaagcatatcataagaaagatcagaaa tctttcgaccttgaaaacgtattgtttgatcctaaagagctgaagaaatacgtgctcggttatctgcaaagtcatggact tgctagagactcagcgatggcagaggggactgtttcacaagaccgcgaaaagaagccatcacgcagatataacgaacatg gcggcaaggtgttaaaagatgaacttaaatacaacagacaacgtaaaaaagagcataaaaaccacttcgaggaacattat tctgtcagtgagagaaaatcaaagattacaaatggaaagcactctagccgaacgaagaatgatcaagcaggtgtaaaaga taaagctacacacataaggaggggtgatgttggacatactcactctaaacaatcgagtaaaggaatggatttggagctta agaaacagttaggccattcaagcagtaaacgaaattttgccgtggaaaaaggcaggcgacatcatgaaccgccatacagg tcaggtaatgcgtttcgtgttaaggaagagagcgcgagcgaaggacgacgtttcaagtctcacataagttaccactcatt gtacaatccacggcgtggttttaaggctgaaggaagtggaagaacttcgaagagggctaaagtacatacaacgtctagac atgttatcggacatagaaatcacgaaaggggtttttccaaacgcaagctcagtagacacatattcaggaacaaagacact gcctcaaagagcaatttgaataagcacaagtctacaaagagggactttgtagcaatacgtccaccacaagcatttcatct agaagggtttaaagttgagaaggtcaatgataacggaaagcgaaaaccaaccaaaggaaagaaacatcaccttgcgaaac aggataaacctcggtcacgtgagcgcggtgatgaatccaagacagtaagggtggagaaaagccacgacgatacaaaggag aaatccttccacaggagaaagactcatactaaattgcgtaagtattcacaccacgaagaagaagcacccaagaagaagca cattgagaaatctagctctctaaacaataacagtcaccacagaaaaaacaaccaacgaaaagcgtctcgccgatcagaag gtaaaaagaacatctctgttgtaaggaaatcatctgggacacgctacagagacgaagagaatggattgaaaacaaaacgg caaaggaaagccaggagaaagagctccataaaggcgttatcaattaaacgccccagtcgcaaggaaaatcatgaaaagaa aaattctgttctgcacagacacgaaacgtcatctgagcggaaacggaggaactcattacaacgaaaaaaacacaaattta aattatcagattcttggatgtctttggaaaagagaaagataccaagttggtttgatgatgccaagtttggtatatttgtt cactggggagtgttctcggttcctagctttgataacgaatggttttggtacaattggaaaggaatacggaggaagaagta cgttgaattcgttaaaaagaactatcctcccggattcagttacagcgagtttgccccactgttcaaggctgagtttttta atgccacacagtgggctgaacttgtggccaactctggagcaaggtaggcgttcaaaactaaaggtgaatgttaaggtttc tggttgggtggctatatgcaattatgcgtgaaatcttccttacctttttttttgctggtcgttgtcatcatcaatccccg atccttttccccatcgtttgcaccagaaaccacaccacccttctacctggtcaatgccttcttgaggccattatcgcata aaataatgttacccttccttgttccaactctataaatatcctccgtcgtatatctgtcatccatttgtcactttctcccg atgattgttgggtaagctggttactttgttgtgaacacaagtgatgtacctgtgtcgggcaacattcttccaactatttt catagtctgacatctacatgcacattatctcgtcacttactagctgctgtttcatgccactgcaagactgcatcgtcgac aatgaacctgagtaatcagtcaaacttgggttaaattgcgaagcctcctgtaaacataatccctcccaacactcggaagc tggctgcagttagctccgtcaggcagtgacgtttgctccaaagtaaccgcgcctcgattatcttttaggtacttcgtatt tacaagcaaacaccacgaagggtttacaaactggaattcaagcgttgcatggaattggaattccgtagatactgggccac ataaaaacatagttggtgggtataaattttggaacttaatgtaatggaatctgatcgtctgcctaagggaaattctgaga aggactgtttctgatgactgacaaaacgtcaggactttattcacctggctgctgagataccataaagtggtgtcactgaa gttgggttcacaataaaccaaatggttttgtctgcttagctaagggcgacaaattgcgagtcgctcgacctcatatattt cctttcttgatacaaatcgtaattggcacattaacaaacccgcagccaaattattctaaatcagagagtcttccaggaat tttcgatgtgatggtataccaaatatgaccacagtggcgcaatctctcaaaaaggcttaaagtttatgaggttacctacg tgtaaaaagtctcgcctacgtaatgataccccttttataacgtttttcgagtcaaggggaatttgccgaatgatgtatca atttataataacccaagttattcttgcattctgattggttctcgcctatgatttattagaggacagatgcatagatgaag acagcgctcgattccagnnnnnnnnnnnnnnnnnnnnnnnnnnnngaatttgaaccaatcacaattcttcactaagcata gcaaccaatcagttcccttcatcttgtatagacattagatcacgtcagtgctattttcgtgtctgtcaaagtggcgaaat ttgaaataaaaaggcattttttccgnnnnnnnnnnnnnnnnnnnnnnnnnnncaaatagattccatgttgccctgcgtct gttcagtaatagatcactgcgcctcgtgtgccacttttttgttcttaccacattttgacgtcatctgtgatctattactg aacagacgcacggcaacatggaatctatttgttaaatagagaatatggattaactttttttcccttttgcttcctttcag acgaactggccaaagcgtttcgtgataatgctaagccccaagtgaagtttggtttgtactattcattgtacgagtggttt aaccctcactatttaaaagacaaagccaatggatttaaaactgatgaatatgttaaggtaagtgggtcccgttccatcaa gattcatacaaagcctcgaagattcttccagggttttcacatgggatattcatacacaaattcggcgaccattctccttt gccatgcctggcagacgaacgccgtcatttgaaagtgggaccgagatttcgcgggttgcttgaatcaaagtaaccagcca ttattctttcttttgataaccaggctgtcatgatgccacagctgtatgatttagtgaatacctacaaacccgaataccta tggactgacggcgagtgggaagcaaaagacacttactggaaaagcaaagagttcctttcctggcttttcaacgagaggta ttgaaatgtcaaatccaattcaaactcgcttggttcgtcataagtatgtctcaattctccgttgtagagtgttcagtggt gaagtgaagaagaaggtgacaggttcaaatactttcagtgtcaatgaaacacaaataacacaaataatagaagtataatt tagcaacaatcagaccagacctgtacagccacgtagggacaatcatccaaaaaacactttgcttacaaaatatttgggtt cttaaatgacccgtagaattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgccaaggagag gacaaacatagtgtcccctttacattgctttattttgcggtgggctcagacatcagttcggacgtcagcatacgaagggt ggaggaagaattgtgattcagagactgtagctcatagttttgactcgggaagattagtttcctcgggttgatggataatt ctgttaaactttgcagccctgttaaagacacagtggtggtgaatgacagatggggtcaaggtcggtgccttaattttgga gtgtgtactggaaacgacagatataatcctggtaagttgaaataatagcgcaccacatctgtaaaccacgttctttgtgt gctctttgccaaccactaatagcacttcctcaattcattgcatactttcgtcttctagctggttacaattgaacttgacg agctccgaagtggcttgaaagctcagtggtagagcagcgcttatctgtgcaatcatgggtttgagttccggtcaagccta gnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnngtgtgatatggaattcgaagcatgatgagtattctgtacatatcataactagcgaaat gaagtcctgtaacttagacagagaaaatctgatagcggtacagtacatattgcgttttcgtgttagatgttgatttctta atgattaaatactccacggcttcctattagcattttaaagttagcagcaccgatagatcgaaattccgcttctttttaat tatgatacataacatgaaggtgtttgcaataaacgtcacagtttaagcgttctttatctaaaacaacgatacataattta gttttcagttagtgtagaagagatagttttctgaacaatgaattacgataaaggaaacaacaaagaagtttcgttttgta taataatgcagcgcacccaaaatgaaatatactactgaacaattttgaatgaataaactcgctgacctgtgaatgagttt gaagacttataactccaaaagctgagctctgagaaaactgaaaacctgtgcgctattttccacctgaagacaattgtgga agcatcacccattttgctagtaaacctgaaaagtcttctttctttttctcatttcttatgccatgttgtgacatcactgt gcgaaaacgattcctttcatagcagcaaagtcgaaagagaagtacaccatttcaacggaggatgttcaaaagttcacccc agtctccttttcaaagtgaatccaagggcgaaacgtttgtttgagaattgtttctactttcaatgtgaacgaaaactcac attcataacaaagttgttacttgaaacagaggcttactagtggactcggaaatagccgatgtgacaattggccaaaaata tcgaaactaagaagccgttcaagaagaaagaaacccttcattggtgttttttagggaaaaggaagtgcagccttctaaca aactcttctgctgtatggcgcgcagtcaaaaattaggagcttcgggtctagtttcgaagctagtaagggccttgcgacta gcttcgaacctcgtcaccaagctcgtaattttgagtgcgcgccatacaacagacagacgagtccgcattcaagctaaagg aaccttcaatcaacaaaaaattgcgcgaaataaattacttcaccttcgcttcccttgaacacaccatggggtcttatctc aatagtctcagctggtgcactttgctccatttgtaaccaaataaggcaaacgtttcttgctacgattaacgtcgtccgtc tcaaagaaaacaaaaactctcgcattggcttgaaaatgtcagggagataagaaacgacatttattttacttaacggatgg gacgttacaagttgaagaagccagcttaagcgtcaagagacttgcatccgatgaaactcaccacaaattattctgtgtat aacagagagcagaacgaatccattccgttagacttactgagtggacaggaaggactcttcactcaccatttaggtgtcat tcgccaaacaccttcatcagagacttcgcgcactgcggaaatctcaactgaccagaaagagctttttgcatgaagcatta ataattcacattatattttccactactggtttgagacaaagcacgttccagttaacatgacggaatggtcaagaacgttg cggacgttggaaaacagcatcctcttaagaatatagatgcaagcacaatgctgcaccaagttttggtaagaggcatcgac aaattcaaagtgttttatcctcttagtcacagtggagtcaacatcgagcaaaataaacatgtatgtaactgacaatagtg tcaatcacatgttgcattattcataatcgaagcttctacaatgatgacaaaaacgatagcggaatataactctccaagga ggcactaactaccgttagcgatgtcctaaatttgtgtctaaacaagaaaatttgaagcggactctgcatctactaagata attataactctttcaatacgtttcaaatttaccctggccaggatatgaaatataaagaaaactttaaaaaatataccgat cgtttatgactgaactcagccatatatggcagtgaaaactaactcaactcacctcgggcaggtgcacaaatggagttaag tattgtttactcttttgtagttatttgcaaacaaacttccgttgggaatctctagcttacaaccaaatatgggaaaaaaa ggaattcaaaaggttataaggacatcgaggaaaacggctgatgttttgagaatcacactaatatcgcagcagctgcaaaa aagaatgaattaaaattctagagttttccttgtgagggaaattcagaagggactccagatgttttctctcgtttcaaatt gagatatgaggtgtaaacgatcagataagctatcattaaaataagagctccacaaatttattccacaaaaatcgaacgca tggagtctctaaaacaaaacaggtctcactagcagataaccaaaaattgagcacggatatgaaaaaacttcaccttcttt cggaaaaaaaaagagacttaatccagtaactgtaaacttttgaacatttttcgacatccgagtaaaatatctttaaaaag ggactgaaattggataggagaacagatatttcctaaacttgcacctgcagtgggtcttgcttgggccttaaatgaccaac cacaatgcttcttttgtcctttagacactcataaacagcacaccacaattgtgattcattttcacctttcacagcttaca gtcccaatcttccatcaagatgaccgacgatgaaactgcagccctggttgtggacaatggctccggtatgtgcaaagccg gtttcgctggagatgatgctcctcgagcagtgtttccctccatcgttggtcgtccaaggcatcagggtgtgatggttggt atgggtcagaaagactcgtacgtcggggatgaagctcagagcaaaagaggtattttgactctgaaatatcccatcgaaca cggcatcgttaccaactgggatgatatggagaaggtgtgtttctttaagacgattcaatataaaggaaataacgagaggc taaattaattttcttaatgtagtatgtaaggcttcaggtctgtaaagctgagcttagaaagaaccaaaataaatgtctaa gaggggctccatatggctttgctacattgtgctggacttaagctaggaacaatcgaacacaaaagtctgtatcacattcc accgcttaggcgatgtctggaagaaatttgtgccacaagtttaaattgaaacataatagcctgggagagcatcaccgtta atgcgcatgacacaataatattattctcaagctcatcgtgattttcattttagatatggcatcacaccttctacaatgag ctccgtattgcacccgaggaacacccagtgttgatgaccgaagcaccactcaacccaaaagcaaacagagaaaagatgac acaggtaatggccatttttcttgtaaactctttccacgagagccttatcagaattgagcgcaacaacatttgcacgccta agtaagacctttgatttcgaggagacttttgggttttgaagttaaagcaagacaatcatcaatccatattttttgtctaa cagatcatgtttgagaccttcaacgctccagcaatgtacgtcgccattcaggctgtgttgtctttgtacgcttctggtcg aacaactggtattgtgtttgacagtggtgacggtgtttcacacacagttcccatctatgaggggtatgctcttccccacg ccatcctacgtctggatttggccggcagggatttaactgattacctcatgaagatcttgactgaacgtggctactccttc actacaactgccgaacgtgagatcgtgcgagacatcaaagaaaagctttgctatgttgctcttgacttcgagcaagagaa aataacagctgcctcaagctccactttggaaaagagctacgagcttcccgatgggcaagttatcaccgtcggtaacgaga gaatgcgatgtcccgaggcgttgtttcaaccttctttccttggaatggaatcagctggtatccacgaaacctgctacaat tccatcatgaagtgcgatgtggacatccgtaaggacctgtacgccaacacagtgatgtcaggcggctccaccatgtaccc tggaatcgctgacagaatgcagaaagaaatcacagccctggctcccccaacgatgaagatcaagatcattgccccacccg agcgtaaatactctgtatggattggagggtccatcctggcttctctgtctactttccaacagatgtggatttccaagcag gaatatgatgaatctggccccgccatcgttcaccgtaaatgcttctaaactatcacaactgtttcccctctaaacgagtt gcattaacaagattttcccatttttgtatgctcaattccgttcaatgaagagtgaacaagaatagcttctttcactttgg accacagacactaatggaatcgttgctattttttcaccaatgcttcttgtaacgtaatagaaatttcaatcacgaataaa actacttgtttattgccattaaaacattctaagacta |
Protein
Protein ID | aug_v2a.05332.t1 |
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Definition | - |
>aug_v2a.05332.t1 MTKGLSLLIHVLLGTQILGVLLEGEAAKSSAHKRKTEYNYNDGNHIKRKSNTHGKIKEEHENGQVSKAYHKKDQKSFDLE NVLFDPKELKKYVLGYLQSHGLARDSAMAEGTVSQDREKKPSRRYNEHGGKVLKDELKYNRQRKKEHKNHFEEHYSVSER KSKITNGKHSSRTKNDQAGVKDKATHIRRGDVGHTHSKQSSKGMDLELKKQLGHSSSKRNFAVEKGRRHHEPPYRSGNAF RVKEESASEGRRFKSHISYHSLYNPRRGFKAEGSGRTSKRAKVHTTSRHVIGHRNHERGFSKRKLSRHIFRNKDTASKSN LNKHKSTKRDFVAIRPPQAFHLEGFKVEKVNDNGKRKPTKGKKHHLAKQDKPRSRERGDESKTVRVEKSHDDTKEKSFHR RKTHTKLRKYSHHEEEAPKKKHIEKSSSLNNNSHHRKNNQRKASRRSEGKKNISVVRKSSGTRYRDEENGLKTKRQRKAR RKSSIKALSIKRPSRKENHEKKNSVLHRHETSSERKRRNSLQRKKHKFKLSDSWMSLEKRKIPSWFDDAKFGIFVHWGVF SVPSFDNEWFWYNWKGIRRKKYVEFVKKNYPPGFSYSEFAPLFKAEFFNATQWAELVANSGARYFVFTSKHHEGFTNWNS SVAWNWNSVDTGPHKNIVDELAKAFRDNAKPQVKFGLYYSLYEWFNPHYLKDKANGFKTDEYVKAVMMPQLYDLVNTYKP EYLWTDGEWEAKDTYWKSKEFLSWLFNESPVKDTVVVNDRWGQGRCLNFGVCTGNDRYNPVTVESTSSKINILQSQSSIK MTDDETAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW DDMEKIWHHTFYNELRIAPEEHPVLMTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVFDSGDGV SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEKITAASSSTLEKS YELPDGQVITVGNERMRCPEALFQPSFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVMSGGSTMYPGIADRMQKEITA LAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF* |