Gene
Gene Model ID | aug_v2a.05447 |
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Locus | scaf1995 : 3043 ... 6692 : + |
To GenomeBrowser | scaf1995:3043..6692 |
Genes list of scaffold | scaf1995 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-51 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains NB-ARC, KAP_NTPase, NACHT, and LRR_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05447.t1 | gi|545700628|ref|XP_005702671.1| | FBox-LRR protein [Galdieria sulphuraria] | 3.9937e-43 |
Transcript
Transcript ID | aug_v2a.05447.t1 |
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Definition | - |
>aug_v2a.05447.t1 gaaggattggagaggcaagaaaggaaatgcagcgatcaggacaaagcaggtgaactaagtttcagttctcagaacttggt ggccatcccaccagttttcttcatatttgtctctctaagtatgacttgtttatttatttgctgatggaattttccacttt ggagctaaacgttcacggcattcgatgaaattcaagaaattttttcagtaattgaggaaaagacaggacgaaagataaat ttagcctatagctattttacttttatttaagggttgtatttcacgatacccaaagcttattagaaagtgaacggggaatt ttttgttgccctgataaggtcattgtcagttgcgtttgacgaccaaccgacccccaagttctgcatcgtgtattgggtaa ttgagtgacatatcaaaacagtcataatatttcacttgtttgtgttttcgccgcctcgttactctttatccacgagaaaa tcacacggtgccatttgtcatgtgacataattatgttagtcaaatattagggaccaagcactagaagacgatttctcgga agctgttacgaaaataaaaaaacaaaatcgctttatgtccacaaatcatcattttttgattgaaaatataaaaaaaccct cccatcaaattctgtatggagaaactgttgttgttcataatcgttttagtttatatattaatctccagttttcattgcgt atttttgtagctcatatttcgtgtccagagcacgttgtagagtggatacaacaaatttacggcaagcgtgaaggggtgat tttgccagttccttggtgtgaagagttcacctttaagctcgagaacattttcactagacttaggatagtcgcgaaggaaa tgacacgcggagaagtgacaaaagaaatcaccagcatgacaagtatcttcacaccacacgaagattgcaaacaacctctg gttgtgtcgattgaagggaagcccggcatgggaaagacgacttactgtcaaaagctagcatatgactgggctacaaaaca agatggcgaatgggacgagtcctttccaagaattgaggtactactgctcctcagatgccgtgaaattcaatctagtatat gggaagcaattgacgatcaaatattgccggaagacatagacccagaggcaaagaagaggtttttccagttcctccgagaa aattcttccaaagtgttgttggtgctcgatgggttagacgaggcagacccagaaaaactggaactgatccttaaactagt tcaaaaagagaagctacctggttgctttattgttgtcacgtctcggcttgaagcggggagtaaaataaggcggtataccg acacattgttggagattgtgggtttcacaacagctgatgcagaatgttttgtaagaaagtattttcaacactcagaaccc ttggcaaagacactcattgcaaaactggggtcagggagtttgaaagaattaacgagaaaccctcttaacactctcctatt ctgtgtgatcttcgaggattttaaaggggttttcccaaagagtagaacgcagctttacatcgagattgttctgttcgttt tgagacgttatgaaagcaagaacggcttgtcaagtagtggtaaagaccttcttttggtttacaagaaggaattgatgacc cttggcaaaatggcgctagattctctgcgcaaagacgaactgtattttgaaaacgacgaaaccgatttcaagcaaagttt gatagtcaagtttggctttctttccatccaggctggcggtagaaagagggccccttgtcaacgttacgggttttttcata agagttttcaagaattctttgccgctcttttcttggctttttcgattattgatggtgcaatggattgcaggtcaatagtg accgatgaacggtacttggaagagctatgtgaagtgtttgcctgcatgtctggaatcgtagccacacgtgatgcagaaac ggcagagttaattgtacatagtattgcctccatgataaatgtatcagagtgtacatctactgaatatttctttctcatga tttttgctcttgcctttatagacgaatgcgaaactttttcagaaaacctctacacaaagttagcttatgcctttggcaaa agtcttgatttggtggacatggttttacctgcaccactttcttatccttacgcgtacctaactcgtacccttttcttggc tctcaccgttaactccaccgtggtcaaatttagttgtgaaggaacacctttcagtattgaggtagcaagctcccttgttc aggctctcagggttaaaacctctatttctacgttgcttctggccaacagcctcttaagtgacgcgtttgtgaattgcctt tctgaggccatcacagtaaacacctctttaaccgctttggatttgtctcacaaccgcattagttgcgagggagcttattg cctttctcaggctctcagagtaaacacctctcttacctttttggatttgtcgcagaacttcattggtgctgacggagcta attccctgtctcaggccttgagagaaaacacctctcttgcaactctgaatttgtctttcaacgccattggtgctcaagga gcttattacctttcccacgcacttagggtgaacacatctctcactgctttgcatttgtcgaactgtaatatttcatcaaa gatagctggttttatcaccatgctaaaaaagtgtccgactactttgtattctcctcagaactcccaggccctccgagcaa acagctctcgcactgctttggattcttctgggactgacctcgatgttggtgggggagcttcttccctggcccaggccctc aaagtaaacacgtctctttctaccttggatttttcttgtaacggcgttgacgataagggagcttcttgtcttgctgaggc ccttaaagttaacacctctctgactactttgaaattgtgtggtaactgcattttcaaggagggaattcattccctctccc aggcgctcgttgaaaacaattcccttactactttggatttgtcggcaaacataattacttttgtggcggataggtctctt tcgcttgctcccggtaattacagcagtacatgtttttatttgcctccaatgttttccagaggaagtgattccggggcatt tactttacggtacttagacccgcgcattaaagtttcatggccttggatgtcataagaaatgtcttaaaatagcggggaac aagacaacaaaacttgtattgtatgaagtagttgtttcaagaaaaaagtatcaaggttgtcgaggagccattaatttcaa attatttgacctgctctcctacagatggctgtaatggcaaattactttaaaagtaccgcgtaaatgcttctttgtggtgc atttttgtgaagaatgtgcatagacagtgagcttttcgattgcttaggaaggatacacttaaaaaaaatataatatgtgg ttgcagcctttatgatcctgttctttgtcactttcgtcaagctgtacatttagcagaatttatcttaatcacctaatcgc ttaatgttacatatttacgttttgtttacgattaaacgtgtcaattttca |
Protein
Protein ID | aug_v2a.05447.t1 |
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Definition | - |
>aug_v2a.05447.t1 MTRGEVTKEITSMTSIFTPHEDCKQPLVVSIEGKPGMGKTTYCQKLAYDWATKQDGEWDESFPRIEVLLLLRCREIQSSI WEAIDDQILPEDIDPEAKKRFFQFLRENSSKVLLVLDGLDEADPEKLELILKLVQKEKLPGCFIVVTSRLEAGSKIRRYT DTLLEIVGFTTADAECFVRKYFQHSEPLAKTLIAKLGSGSLKELTRNPLNTLLFCVIFEDFKGVFPKSRTQLYIEIVLFV LRRYESKNGLSSSGKDLLLVYKKELMTLGKMALDSLRKDELYFENDETDFKQSLIVKFGFLSIQAGGRKRAPCQRYGFFH KSFQEFFAALFLAFSIIDGAMDCRSIVTDERYLEELCEVFACMSGIVATRDAETAELIVHSIASMINVSECTSTEYFFLM IFALAFIDECETFSENLYTKLAYAFGKSLDLVDMVLPAPLSYPYAYLTRTLFLALTVNSTVVKFSCEGTPFSIEVASSLV QALRVKTSISTLLLANSLLSDAFVNCLSEAITVNTSLTALDLSHNRISCEGAYCLSQALRVNTSLTFLDLSQNFIGADGA NSLSQALRENTSLATLNLSFNAIGAQGAYYLSHALRVNTSLTALHLSNCNISSKIAGFITMLKKCPTTLYSPQNSQALRA NSSRTALDSSGTDLDVGGGASSLAQALKVNTSLSTLDFSCNGVDDKGASCLAEALKVNTSLTTLKLCGNCIFKEGIHSLS QALVENNSLTTLDLSANIITFVADRSLSLAPGNYSSTCFYLPPMFSRGSDSGAFTLRYLDPRIKVSWPWMS* |