Gene
Gene Model ID | aug_v2a.06359 |
---|---|
Locus | scaf2346 : 19976 ... 30089 : + |
To GenomeBrowser | scaf2346:19976..30089 |
Genes list of scaffold | scaf2346 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.06359.t1 | gi|221124776|ref|XP_002163575.1| | PREDICTED: collagen alpha-1(X) chain-like [Hydra vulgaris] | 4.0e-13 |
aug_v2a.06359.t1 | gi|752431375|ref|XP_002927782.2| | PREDICTED: collagen alpha-5(VI) chain [Ailuropoda melanoleuca] | 4.0e-11 |
aug_v2a.06359.t1 | gi|584051183|ref|XP_006770276.1| | PREDICTED: collagen alpha-5(VI) chain [Myotis davidii] | 4.0e-11 |
aug_v2a.06359.t1 | gi|514060718|ref|YP_008124799.1| | 5.0e-11 | |
aug_v2a.06359.t1 | gi|407482732|ref|YP_006779881.1| | 6.0e-11 |
Transcript
Transcript ID | aug_v2a.06359.t1 |
---|---|
Definition | - |
>aug_v2a.06359.t1 ccgtgttcacgagagagttggccgagtttcgcagacgaagtcattggcaacagagtcgtttatttattgtcccagtgtta ctttaaactaacatgaaagacattagtgccaacagaaagcctttgcagggagtacgaggatttttaacagtcagtgttat aggcttcgttttaacttcagcgctcttggtggatgaaacggaatcagccagggaagcaaaaggaacgaaaagtgtcaagt ctaacaaggaaaaggtaaggaagatatcttagatttccgtttttgtgaaagccctcgtccttgtgaaacgacaaattcaa gttgctaagctggatgctgcgaactgtatactgatactccgtgccgactgatgagttaaccatggaagcaaagcgctctt gaaagagtcaagacagagacttttcgatgatacagatttatgtatcaacaatcaaactaaacatgtaacctcaatgagtt gtgatttattttctttaacagatatacaatcgttgcaaacgataacagtatgtttattacatttaggtacttataaattc aacttatgatgtcaatgccttaacggtgaaattttcatccctttgaactgatttattagagatagcgacccaggtgttgg ctaaacatagtttcacaaatggaacaaaatccttcagctacaaatgccagaaacgtctgctgctcatcgccgctggaaaa gaaaaaaaaactctgtctggctcacatgcttttgtagttagtggctgcgcttgccgaaaggagctatgatcttaaacaat agccagatgctatatcttataagctctcattaattcggcattggctttccagctgatgagaactacttaagtgaaaaaga gacaattaggaaaaaaaatcaacaataataacaataagtgattgtttcaaataaaaaatgaaccttaaaatagtcagaac ctaacgggcttttctctaaaagataatttggctgcgaagctagtaatagtgataatgaaataatcataataggctttaac aataataattcaaagtttctcacgattacttcagtttctatcgcttcacgttcagcaaaaccgcttcaaagaagggaagt agaaaggaaaggcaatcgaaccggttaaccacttgttatcaacggttccggttggctcataactgaggaacggaagcggt catcaatgcaggcggctagtgcttgttaattaaatgagcgataattgtttattgcaaaacgtggcggaaaaaacaaacta caagaaactcactttatccaacgcaaacctatcccaatcgaaaagttttcctattagggtgttcaagttgtttacacaga cacgcccactcgacaagagctttggcaaacggaggttaaggcgaagtgggtctaaaaacactttcaacgccctatgctaa atattgacatcggtcaagtttttctccactgatgaaagtaacgtgtttttagcacatttggatctacatctcagatcgat gttaaagagaggtccaagggagtgaaattaacagtttgattgcaaacgagtaaacttttgacgctaactaaaaacaaagc tatgaaattttctatgaaagacaaggaagccgattggaactgggagttagagaacagcgaatgccttttgattttagaca tttttttaagcaggaaagaaagctggttaggccagccacaacatactactcaaattttacataaaccccacgtttgatcg gatcctgctaaaaatcttaagccacagtttgtaacaccctgatgaaaaaatggaataccttgctttgctttttctcattt ttgtttaaaagatcttcacttcgtaccacaacaagccgattacatcatttgtttgatccgtcccgcaccagcggggtttt gtcaaaggttgctaactgaatcttcgtacttttgattttgtatttctttcctgttcttttgttgttttataggataagtg cagattgttaagggatcagggtgggaactattacataaaatgtttcaacacctccgaggaaaagcaggagagagcacaga aaagcagaaagacgggtaggacaggagaaaacagaaaacgcctgaaccaagtaagagttgaaatcaaatcgtgcgatccc tgttgcaaagcgggttggccgatcatatccgcctgagtttgtaagggttacaattaagaaagtaacagggtatgaagttc caattaaatcaatcatttcttttttgattttatcattttgatggatgtattgttttgctcaagtgacagccgtctactaa ttactggtttgatgaaataaaccgaccctcgtattaatgtctcaatgatcacgcgaatcttttgaaagtctcaaacttcc tccgcaagcttcatctccttcaaaatcacaagcaaatgtgacgaattagcttcgtttgcacaaaaaaacgatagaagaga gaagcaaaggtgatatgtttagcctcgaggctatcttaatggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctgttttcaatacaa gaaccatcattctaccaatgctagtatattaaccaaacttcagtgcacttcaaggccaatgggagagttagacacgcaag caaaagttaggtaaaacctattcgattttaacttatcatttttctagtggtttcattttcgaagccgcgagcaatttcac agcgggaattagcacctcagtcgccctaattaattaaaaaaaaaaagaaatcgagaagagcgatcacagttttgcatttt gaatttttctctcccaatatgagtgcaaccatgtgctgttttaaactcaagggctgaaatagcacaggaataatggcgat tcagtgtagttatcacccaaaaagctcaagtacaaaccgccgaagttccgcgttcatcaacaacgagaacatagagatag attttcgacatgacttcttttcaacagtcaactcccgagattctccaatggaacatacatttcctgttttattgaacttt ttttttattactgacgctccctactgtttgaaatcagtttattttaaagacaatttctttttcaagaattctgcgaagcc ggtctttctgtttactaatttaaaacgtcgtttgcactcatcgtagtcacattgtttaatgtgcctttttgcatagaggg ctaaatacatcgaatgtttattcacgaccgtggccagacgcattgctattgcgggctaaaacagcaaattaagatcaaat gtttttcttttgggctttaatagtttcaagtctgacaataataaagttaacaccgacaaatttcgtctcgagcgcagtct ctgatgtaaagagaaagtgattcttccgattatcatttgtaccaacgattactttttggttgtaagaacattaattttaa gcggatattttcgccacggagcagtttgcatatttgatgaggatttcggactgacgcaggctggaaatcatcgccctgtc aatcatggcattaatcagtactccaagtgcataaatctgtgaatcaattttcaccatcatagtaggcgcagacctgctgc gagagctattttcccgaatttttacttaaaaacaatcgatttccgttcccaaaataatttattttctgacaatacaaaat tgcaccataaaaaggcagaatgaactgtattcgaagaactagaaaagcgaaacgaaaacaaaaaaggggctggattgcta tccaaaggaatctcgcagtttgaaaagttttagatcagctgaacagagtgtcttgggtcaaagtaatctagttttttgct ttctatttttattttttatcagaaactttctatcagtattctcgatatcattttctgctcgatagggaatattttcgtaa ctgactcagtaaggctgattctttggggaaatagctatgaaattaagacgatatacacaggtcaaagccgatatagacag gaatggtctccttcgttttccttcattcgtctcaacaacaagatgttcccacgccgtatttcaccagtggcttattttac ttttaatggctacaatgctacaaaggtgactaatcctcttagtctgaaattagtattcattgcaagatggtattaattgt ttgtcatggatgaaatacaaacatgcttaatctttttatatccactttaaaagattttaatgctttgcagtttatgacgc gcccattgctaatgaatcaaaccttctcgccatctttttggatctcctaaagatgctaactttatcttcgctcagttcac actgccgttttcttatagcgttggtgaaagaaatataattcagacttttctgttttaagtttttttcagtttttattttc tcaatgccctccatgatgataatagtaataaagtttatgttcttatgcataaatatattttggcctttctcagagctcat tttaatgacggctcgggccaaaatgagtccgagactggccaaaacatatttaagcccgcgaacataaactctattctttt aatacatctaaactagatcagtagagtacgttcgatcgaactgcagcatctgtttcctagaaaacaacacacctttcaga caacaaacaaacaaaaagcactcgaaaaacctggaaaaacgacgaaaatacaatgcgttctcccatgtcgaacgcaatta tcgatctcaaaatgtcatcgcgtgagcaaactaaaccatcttcggatggcctttgtttgatgtcggatctattacacaat tcgatctcgtttgaaatagtaacattctcaaacatgcagttcaagaattccttattaccggcgtcagataagaaattgtt tctatttttgaattaaccttcgtcaacaaggattattttacaagagttacaactgtattattcaattcttatctgtagat ccaattagtaacgaattcccataaattaaatggaattaatagtgcgacacgggcaaagccatgtttaggatacgtttatt cccgttttcagtttcctcagtcaaaatttagagaaatgacaactttttctaggaggtattgtgactaaaaatctcttaca tcaagggatcatttgctgatttagcaagacgatgggtatgtttcttgacgacccccaacgcataataaatacccgccaaa tatggtcaaactggaacagattccagactattccacgcgccctcccgtcctcatctgacgttcccgtcctgttgctaaat tagcctattagtgctgaatactttttctccttttcaattttgtgtcacgataaagactggacaacctatttatggaggtc cgcgaccaaatgatgattaaatggttaatctaaagaggagtcgtgaatttaaaattgaaagagttcaaagttcaggattc aaactttttagaaactggactgaacactgagttcgagcttcccgcgatctaccgcgacgttttgtcacgtgatttacagt ataaatccgtaacaatcacgctgcaaaacgttgaattctagtactggataagcattccgcgatggaatcgaaagcttgta acttctaaaagtttgaatccggaactttgaaacccttatgctatagctttaaatgatatgattggatcaagcaacttgtt tcttgctaataggagtcttgaatgtttagaaacttttattagcttccgttaaatagagcagttttccttgtcttatggtg gcgacagctggtcagctttcctcttgaaatgcaagaaggttatcaagaggagtactaacttaaatatctcgaggtcaatg cacttttaagaatagccttttgagatgagtgagattcctaagataataactttcattgaattgaatttcattcaattatc ggttccaaaagtttgtgttaattgacagaaaatcgctcatagcagttatatagtaatgaaaactaccgacaatgctgtgg ttaaannnnnnnnnnnnnnnnnnnnnnnnacaagaaaaagaaacaccctgcaaagggttccgttcttgttacacttcagt tgaagtgcctccattgaagatactggacatgagctggtctctcactacgtacgtcattaaatttgggttttattgatgac gtggaagaatgttttggaaagaaggctctttgtctagaattacgattcgtattcatgttgctttcgtctaacacatcgcc atttgttcgatatttcagtgatgtctgcggtatcctaactttgttgagttaattccatactttgttatttctcgtctcaa ttatgtaaatcaatcaacaaaccaataatatctggcatgaatgggatttaaaatgccgataccatcaattaacaacagaa ctgcaaaataagagtcggtaccaataaacaattactcttgtcagcatgtggtgtaaataaatttaacccacttgactaaa ggaacacagatatgcagtcacgaaaatgtatttatagcgcaattttcttctcggccttttgtacttcattatttctcgtt tgttgattgatcagtttttttgcagagatatctcattggcgattgggaagtcaagaaacactttagatttctttcttgaa aacttgcgattagaaaaacggtccctgagctgaaaatgaggattttttcaacaaatgacaaccctggaaaaacgcagcaa taacaagacgttttattcatgagggtttatgagtttattgaaactttgtttattttttttgcttattattcttgatgttg ttgttagtgtagtggtgaatgccgaggaaagcgaggccacagaggacagcgaggaaaaccgggctctaaaggcgaaccag gccccaggggtcctatgggaccacaggtcagtgatccttcacacttgtccatttgttcatgtgcttctgttacagcatag cctgagccagatcaatagctgtcactttagttacgggcggtttacacacattaagtaggtcaatgggtcattttccattg tattgaccaatcaatctcgtctacatgtggctataaacaaaagaagctcaacgatgacaacagctattgaagacgggacg atcagctaagcgtaatgtcgttattgcttggactgggtcaaggcccgttgcattatgatttgattatggcctggccttag gttatgaatttttaaagatggcggtcattgtgatgaaaacgattgcgttgatcattaactnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaccgtcaaacacc agcactccatctcttggagtccattgcttacctggaaaagagggtcccaaaggatccaaaggaaacacaggaaagagggg tgtaagtggtcctcttgggctcagagggttgaagggacagagaggagttaaaggaagcgagggcccacgtggaaggaaag gagacccgggtccgcctggtaattttgttggccttgtttgtctgccgcgttatacaaactgggtgagccggattaactgg tttaagcaacaccccgaggttcattgcgatagaagagaattcttacaaggatttagtgtggaagagaacaatactcgcgg tcagcggagatttaaatatacttgctgtgccctgagattaccatctgctcagtgacaaggatcgtcagacgagacggaaa gatcagcaggaagaacgatagtttcaaactctgatcttcaatcaatgtctgctcaagaaggctctgttaccccttgagca agaactgagcagcatctcttgaacagttttatagcaaagacttttatacaattgataagcgcaatatggatgacaacact aattttaggattattctgtcttgtatcaccataatcagccaattggtttcaaaagctgtttcaccattttccaccaatca gagtcaaccacagaacaagttgacaattgctccgtcgtgtactcccgtgttttgctccagtttcatgtatttgctttgga ttttgattggcttgtttgataacactcgtgcgttgtgatttcctgtgaaattatctctttgattttaccccagaaccgaa catttaagtccttcaataattgaaaagttgaatt |
Protein
Protein ID | aug_v2a.06359.t1 |
---|---|
Definition | - |
>aug_v2a.06359.t1 MKDISANRKPLQGVRGFLTVSVIGFVLTSALLVDETESAREAKGTKSVKSNKEKDKCRLLRDQGGNYYIKCFNTSEEKQE RAQKSRKTGRTGENRKRLNQCSGECRGKRGHRGQRGKPGSKGEPGPRGPMGPQGPKGSKGNTGKRGVSGPLGLRGLKGQR GVKGSEGPRGRKGDPGPPGNFVGLVCLPRYTNWVSRINWFKQHPEVHCDRREFLQGFSVEENNTRGQRRFKYTCCALRLP SAQ* |