Gene
Gene Model ID | aug_v2a.06408 |
---|---|
Locus | scaf2361 : 29156 ... 32054 : + |
To GenomeBrowser | scaf2361:29156..32054 |
Genes list of scaffold | scaf2361 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 20-25 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.06408.t1 |
---|---|
Definition | - |
>aug_v2a.06408.t1 gcatagagagaaaaagtagacgaagtcacttaactattcctctacaaaattttcctccggctgaaaagcgtatcatttgt ttatttgttgcactaactcattgcttatttacttattaatttatggtcaaaagaatggatgccagagacggagataatac agtctgcacaagtaatgaaaaaggtacctatcaacaagttattgagtatcatgaaaaacgttcgaaaattgctaaaaaaa tcggtgatcgggccgaagaaggaaatggatatggaaatctcggtaatgcctaccagtcactgggtgactatcaaaaatcc attgagtatcatgaaaaaaatttgaaaattgcaaaagaaatcggtgatcgggctagagaaggaggagcgaatggaaatat cggtaataattaccgcttactgggtgaccatcaaaaagccattgagtatcatgaaaaacatttgaaaattgcaaaagaaa tcggtgatggggtcatagaaggagcagtctatggaaatctcggtgatgtttacctgtctatgtgtaactatcaaaaagcc attgagtgttatgaaaaactgttaaacattgcaaaagaaatcggtgatcgtggcggagaaggaagagcctgtagaaatct cggtaatgctcaccagtcactgggtgactataaaaaagcgattaaatatcataaaaaatatttgaaaattgcaaaagaaa tcggtgatcgggccggagaaggatttgggtatggtcatctcggtaatgcttaccagtcactggctaactattcagaagcc attgagtgtcatgaaaatcatttgaaaattgcaaaagaaatcggcaatcgagccggagaaggagcagcgtgtggaaatct cggtaatacttacgacttactgggtgactatcaaaaagcgattaagtatcataaaatatatttgaaaattgcaaaagaaa tcggtgatcgggccagagaaggagcagtctatggaagtctgggtaatgcttaccagtcactgggtgactatcaaaaagcc attgagtgtcatcaaaaactgttggaaagtgcaaaagaattcggtgatcgggccagagaagcaaaaagctatggaaatct cggtaatgcttacaattcactgggtgactatcaaaaagccattgagtattatggaaaggatttaaaaattgcaaaagaaa tcggtgatcgggacggagaaggacgagcctatggaaatctcggtattgtttaccatgcactgggtgactatcaaaaagcc attgattatcatgaagaacatttgaaaattgcaaaaggagtcggcaatcgggccaaagaaggaattgcttatcacaacat tggagaaaaattcttttccttgaactgtttaaaaacgcggcagataattatcgttgcgccttggaagccttaaatgctgt gagatgttccttgaagtctaaagatgactggaagataaactttcgtgagctgtacgagaagacgtacactggcttatgga cgtcgttgctaagaatggaaaagttggatgaggctttgttggcggctgaacaaggacgagcgcagactttgactgataat ttgctgattcaatatcaactccctgcctccttgttagctgccacaattgacctcaaagagatagtatctcgcttcttctc agagctttcttcaccaattctttttctagcagttgatggacttacgattaacatctggcttttaagcaggggaaagaaag ttatatttcggaaagggaggctggagggtgatagaagagagacagatcctgtacgcgcgctactacaaaactgtttagaa aaaatacgaactgaaattagtgtaggatgtgaagatcacacacttgatgaacccccgtttgactgccagtccagcaggga agaaggcgaagaagtgaaaaaaacagtccagtccttagagaatcatttcaaggcattttatgatggaattattgggccaa ttgttgacgtgcttgaacttcaaggcaatgaggttgtcattgttcccgatggtgcgctgtcctttaccccatgggccgca ctttttgaatcgattaggattcgcactgttccatctcttacaagttataaattgatcctaaatgtccccgacggccatca caagaagacaggggcgcttctggtcggaaatccgtgctcaaccgatttagagaaacccttagccaacttaccatgtgctc aagaggaagtagaaatgattgcatcaattctcaacaccggacccctcacaaggagacaggcaacaaaagctgaagtgata aaagggctgtcgtcagttggtttaattcacattgctgcccacggaaacgagcgtaatggagaaattgccttgtgtccaaa ccctggatggacttcaaagttccctcaaaaaaaggatttcatgttgacaatgtccgatgtacaagcggccaatcttcgag ctcgtcttgtggtgttaagttgctgtcacactggacgaggaagaatttcgaaggatgagggtgtggtcggtatcgcacgt gctttcttggcagctggtgctcgctctgtgttggtgactctctgggcaataagtgacaaagctaccatggagttcatgaa aagtttctaccaacacctaaaagaaggaaaaaccgccagtgctgctcttcaccagtcgatgaaatcctatcgtgaatctg agaaattttcagagatgaggtactgggctccattccaacttatcggagacgacgtgaagatagaattcgaggctgatgat gacgtcaaggaatgaaagagttaactgttccagtttagttcttctgtttcgtcacgcttgcgatattttagtggaacgca agaaaaagcttgcttctta |
Protein
Protein ID | aug_v2a.06408.t1 |
---|---|
Definition | - |
>aug_v2a.06408.t1 MVKRMDARDGDNTVCTSNEKGTYQQVIEYHEKRSKIAKKIGDRAEEGNGYGNLGNAYQSLGDYQKSIEYHEKNLKIAKEI GDRAREGGANGNIGNNYRLLGDHQKAIEYHEKHLKIAKEIGDGVIEGAVYGNLGDVYLSMCNYQKAIECYEKLLNIAKEI GDRGGEGRACRNLGNAHQSLGDYKKAIKYHKKYLKIAKEIGDRAGEGFGYGHLGNAYQSLANYSEAIECHENHLKIAKEI GNRAGEGAACGNLGNTYDLLGDYQKAIKYHKIYLKIAKEIGDRAREGAVYGSLGNAYQSLGDYQKAIECHQKLLESAKEF GDRAREAKSYGNLGNAYNSLGDYQKAIEYYGKDLKIAKEIGDRDGEGRAYGNLGIVYHALDNYRCALEALNAVRCSLKSK DDWKINFRELYEKTYTGLWTSLLRMEKLDEALLAAEQGRAQTLTDNLLIQYQLPASLLAATIDLKEIVSRFFSELSSPIL FLAVDGLTINIWLLSRGKKVIFRKGRLEGDRRETDPVRALLQNCLEKIRTEISVGCEDHTLDEPPFDCQSSREEGEEVKK TVQSLENHFKAFYDGIIGPIVDVLELQGNEVVIVPDGALSFTPWAALFESIRIRTVPSLTSYKLILNVPDGHHKKTGALL VGNPCSTDLEKPLANLPCAQEEVEMIASILNTGPLTRRQATKAEVIKGLSSVGLIHIAAHGNERNGEIALCPNPGWTSKF PQKKDFMLTMSDVQAANLRARLVVLSCCHTGRGRISKDEGVVGIARAFLAAGARSVLVTLWAISDKATMEFMKSFYQHLK EGKTASAALHQSMKSYRESEKFSEMRYWAPFQLIGDDVKIEFEADDDVKE* |