Gene
Gene Model ID | aug_v2a.06794 |
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Locus | scaf2531 : 22 ... 3685 : - |
To GenomeBrowser | scaf2531:22..3685 |
Genes list of scaffold | scaf2531 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 29-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 29-1. This gene model contains RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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integrase core domain protein | GO:0003824 |
Transcript
Transcript ID | aug_v2a.06794.t1 |
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Definition | - |
>aug_v2a.06794.t1 agagaatcgaaattaacttgttttaaaaatggccgtatacgtatgtctgccgtaaatagagtcacaagtaggggggccgg acaagagctcaggcgatgcgtgttaattacaggctgctacagttgcattggtgttgatgtacagttgtatttcaagttga atggagtaagtttctttgttgaaatagagatcatcctctatatcacttatatgtaacctgaggagctgttgctaaagaat tcattaccaaacatctgaaagacaaagatgaagcgaaaaccatcaaccgaaaacagtgatgtagacttcatctcttggaa ttcttaaattgactaatactgattttttgaaaagagaaaaatgagaaagacatgcagcgaatgtcttacactaatacaag agaggtgcatcttacttatgctcactgcaaacactgcagtcaggaaaaggtgaaggaatagcagggcaatccaaaacttc atctttattacctgacaaagacaagagagcgaccgcagtcgaaggcaaccgaaggcnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattaaaatttacaaagggcaattaatgaga aggaaattgactgttgtaaccagaattgtcagcaagttagcttcaggtacgtaacccgtcgtctcgtgacaatacagccg cacagtgagaaagtgatccccgtccatctcctccatcgacagtcgtcgcccggaactgccacgcaaggtttgcgaatttt gcagccctgtggcactcgccttcaggaaaagagacttcagcagaaccttggttttggcaggaggaaccagcccacactgt tgtagccgtagccaaagcagtgactagtgttgcagagttggaattgcctcaagttgattcagagagcagcacaagcgaag ttcaccgaaaccacccagaggaggagtacaaggaaacattaccaggtcccctaaaagaactatgggagcgtagcgcagaa cagttgacggaggaggaaggccatgcagttgctaagttgttgcaccgacataaggacatattttccttatcggaacagga ccttggcagaaccaaattgataaaacaccacatcgatatgggcgaggcaagaccaattaaacagcaacctcggcgtgcct caccatcaaagcatgtagagattgaaagacaagtggaggatttattgcgacgagacatcatcaagaagttaaacagcccg tggtcctcccctgtagtgttggtgacaaagaaggatggctctcaaagattctgtgtagactataggcaggtcaatgcagt gaccattaaagatgcttatccactcccacacattgacgattctctgtgtgccctctcaggggcaaaatggttctccacat tggacctagcttctgggtattggcaagtcccaatggacccagctagtagtggaaaagctgcttttgtaaccaccagtggt ctctacgagtggaacgtcatgccctttggccttacctcgtcaccaagtacttttgagcgattgatagaattgattttagc aggactaaggtttgaaacatgcttgatttacttagatgacaccatagtgcatggaaaaacctttctggaagagctggagc ggttggaggaggtcttcgttcggtttgaatctgctggacttaaactgcaacctggcaaatgtgtgctgttccagaagagc gtcgcatacttgggccacatcgtgtctgagagaagtattgagacagatccttctaaggttgaacgcgtgtgtgagtggcc ggcgccagagaatgccacggaagttaagagcttcttgggacttgccacttattatcaacgttttgttccaagctttgctc aagtggccaagcctcttcacagattaaccgaaactaaaattgactttgtctggacaccggagtgccagtcagcatttgat atgttgaagaacctactgtctactgctcctgtattgtcatatccggattttacagcggagtttatacttgactcggatgc cagtaatcgtggaatcggagctgtcttaagtcagctgaaggacggagtggagcatcctgtttcttatagcagcagattgt tgactaaagcagaaaggaattattgtgtgacacggaaggagctacttgctgttgtggagtctgtaaagcattttcgccat tacttacatggtcagagatttcgcatcagaactgaccatgcgcccctccgctcggtgctgaaagttaaagagccagaggc acaattggcaaggtggatagagttcccgagtccatttgagtacgacattgaatatcgagagggtcaacggcataccaacg cagatgccatgtcacgaagaccttgtagcgaaggctgtaagtggtgtaaagagtggaagaaagctgaacaactgatcagc gtcgctgtacagactgagatttcgatttccaagacggaagagcttgctgaagaggaagcagatagtactcaggttgaggg gagtgacacagaactgtcctccgctattggtgaacattgcctgccgaacgatctacctagtctcaggtgcaacacgatcg agttagaaccgacctggacccgggaatatcttcgtcttcaacagcaacagatccaagtcttaag |
Protein
Protein ID | aug_v2a.06794.t1 |
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Definition | - |
>aug_v2a.06794.t1 MSAVNRVTSRGAGQELRRCVLITGCYSCIGVDVQLYFKLNGEEPAHTVVAVAKAVTSVAELELPQVDSESSTSEVHRNHP EEEYKETLPGPLKELWERSAEQLTEEEGHAVAKLLHRHKDIFSLSEQDLGRTKLIKHHIDMGEARPIKQQPRRASPSKHV EIERQVEDLLRRDIIKKLNSPWSSPVVLVTKKDGSQRFCVDYRQVNAVTIKDAYPLPHIDDSLCALSGAKWFSTLDLASG YWQVPMDPASSGKAAFVTTSGLYEWNVMPFGLTSSPSTFERLIELILAGLRFETCLIYLDDTIVHGKTFLEELERLEEVF VRFESAGLKLQPGKCVLFQKSVAYLGHIVSERSIETDPSKVERVCEWPAPENATEVKSFLGLATYYQRFVPSFAQVAKPL HRLTETKIDFVWTPECQSAFDMLKNLLSTAPVLSYPDFTAEFILDSDASNRGIGAVLSQLKDGVEHPVSYSSRLLTKAER NYCVTRKELLAVVESVKHFRHYLHGQRFRIRTDHAPLRSVLKVKEPEAQLARWIEFPSPFEYDIEYREGQRHTNADAMSR RPCSEGCKWCKEWKKAEQLISVAVQTEISISKTEELAEEEADSTQVEGSDTELSSAIGEHCLPNDLPSLRCNTIELEPTW TREYLRLQQQQIQVL |