Gene
Gene Model ID | aug_v2a.06829 |
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Locus | scaf2548 : 3797 ... 12705 : - |
To GenomeBrowser | scaf2548:3797..12705 |
Genes list of scaffold | scaf2548 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 30-1 |
Description | This gene model has RVT_1, RVP and rve domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.06829.t1 |
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Definition | - |
>aug_v2a.06829.t1 ataagttcaaacgcaagaaagtgaaccagcctgatgacatcacagagtcttcatattcttgagaaaaagatatcttgtct gtgtctttgcatcacactgccaatgctgtggatatgtcaaacttcaagaataaaattttcacccacatggagattgcaaa tggtttagtaaagataatagtcgattcaggtgcttcttgcaatgtgttaccccgtaaatttcttccaagggacacggaaa ttaagaagaccagcctgaagttaaccacgtatactaaaacgaatttgaaggtgctgggcgtggcgaaagtatccctgcga aaccctaagaagaagaaaaagtatcgtgctgaatttgcaatcattgaggaagattacactccccttctgcgttcttcaat ggcacagcaaacgggactattaactggccaacaggaaaacatcctgcaagttaaggaaagttatcaggaatttaatatgg agagaatcgctgcgacttaccctgatgtcttcaaaggtctgggttgtatggaaggagcgcttcacttagaagttgatgaa agtactttgccttcaataatgcctccccgtggtgtgcctctcgccctgaaaaaaaggctgggagaggagctggcctgctt agaaaaagctagtgtgataaagaaagaagaagaaccgacagactgggtatctagccttgttgtaacagaaaaaccaaatg gcaaacttagagtgtgcatcgaccctcagcatcttaacaaagctctcaagagaagccactatccactgccagtaatcaag gacatactccctgaactagcggatgtcaagatattttcaaaagcagacctcaaagatggattcttacagatacagcttga ccagaaatccagcaagctaacaacgtttcagaccccctggggccggtacagatatctgcggatgcccttcggaatctccc ctgctccagaatgttttcaacgaaagttggattcaaatcttgaaggtcttaaaggaatctttaaagtagcagatgacatc ttaattaccggccgtggcaaatgcaaagaagaagccttgaaaaaccattatgcaaatttattgaagctgctagatagatg ccgggaaaggaatctgaagctaaatcgagagaaactacagctgaaatgtacagagatcccctttattggccatgtactaa cgtcggaaggaattaaacctgaccctggaaagatagaagctgtactaaagatggaaagacccagtgatgtggcagcagtc cgacgactggtaggctgagtcaactacttgtcaaagttcctaagcaaactatctgagctgtgtgaaccactaagacgact cacccacaagggcgtccagtggaactggtctatcgagcaagagaaagctttcgaaagtgtgaagcaagccgttaattcag ccccaattcttcgatatttcaattccaacgaacctgttgaaggtcaaggagacccttcagccaatggtatagggtttgta cttatgcaaaatggtcaacccgtatcctattctagtggggccctcaccaaaagtgaaagggacttttcgcaaattgagaa ggaactgttggcacaagtctttggagttgaacataatcatcagtatgtttatggccggaaagtcgtgctgtggtcagacc atagacctttggaaataatctctaagaagccattatgaacagcgcctaaacgcctgcaacggttgcttctgcgattgcag caatatgctgtcgagatccgctacaagcctggtcctgaaatgtttttggcagacactttgtcacgtgcctatctaccaac aactgcccgctctccagctgaagaagagacggaaagaatccgtgcagttgattacctgcctatttcagagctccagttgg ctgaaatccagcgtgaaactgcagcagactcagtgctacagtccctcattcaagtaatattgcaaggctggccagatcag aaagatgccctaccctcagagttacatccctacctcactgtgagagatgaacttacggcacagggtggaatcctcttcaa aggtttaagagccccagactnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacttctccacgcatagaatccccaacaagctgcagagtgacaaaatggac caccgcgaagttcctgcgagtttcaacagtttatgataagctatgacattgaacatattaccagctctccacgttaccca caaagtaatggcaaagcagaaaacgccatcaagacagctaaaaatctgctaaagaaatccaaggttgctggaacagactt ccacctagctctgttggcatagagaaatacaccctctgaaggtctagaaagttctcccgctcaaagaatgtttggtcgcc tcactaggacactgaatcctacgaccagtgagcttctcgaacccaagatagtcgaggatgtccaaggaaagctcttgaag agaaaacaactgcaagccaagcactataacataagtgccaaggagcttccccaccccttagcaaaggagaaattgtgcgt ttaaagcctacagataggtataagagatggttcaaagcgcgtgtagaacaccaagtagatgtgagatcatatgaagtcag gacggaggatggaaagatctttaggagaaacagacgacatctcagaagcagtaaggaaccagtatgcattggagtcaacc aggagcccatccacatgccgagtcagactcacctgccagaaagtccccccatccccaaacctagcgtcagtcgtctgaaa accagtgtccctctggagtaccaccgcctaaggaacctggagaaatggttggatccaagaaacctgggagcagtttccag actggtaaaatgccagagcagtcctcaccccccaaaccagttgactgtccacttacccggagtggccgtatgtcccgacc accaagttagtttaaggactttgttgtcgccaagctttaagtttttaggactagagacatggctacttagtcatttagtt tttttttgtctattggatagcattcgcccgtgttagtttcttttcttaaacaagaaagggtgtgacgatatgtcaattgt ctagatcagccaatcagcattgtgacgatatgtcgattgtctagatcagccaatcagcgttaatgttcgaccatgtgctc gagttgttgttgttctttcgtatatcacggccgtgtaacatcgcttcgtgctagaataaacctgtgttgagataacggtt tatgagcctattgagcttaatttatacaattttagagtatttttcttttttgggttttaaaagaaatcttaaggttggac ttagtgtctgtgatgtccagtctgctgtctatttttacctcgcgcatgcgtgttaagtgttgtacgcgccatcacaggat ctttgtcatttttcttatatcttgttcatttttgcattaaagcagttctcttacggaataacaataataatttattgttc actttgagacatattattggcgacgaggataaacgatttgcgggaaataaagcataaagcaagacagcgacgagcagaac agttttaagaggaagaaagaccctgcaaaacttccagcttatctggatgaattaatttcagcaatgcaaaacctcgaaga aaatgaacaagctccagcgacgaccacagctcccgttacaattatcacagaaaacagaaacctcaaagcacaatcattta tacctggcgacgaccaactcaccacaggaaaaatatgggatgaatggttggaggaaatcgagcgggaattttggttcttc cgaataacagacccgatggataagaaagatgcacttctcatttacggcggaaaggtaatctcgcggctcgagaaaagtct tcccaacccgatgggtgaattgaatgagtacgaaaaattgaagaggaaactcaatgattatttcacgccaaagaagaata aacattatgcaagatacttattcctaaagatgaaacagacacacggcgagacaacaacgatgtacgctgctcgtctgaga gtgaaagcaaacgaatgtgagttcggaacagcttgtgaagaccgaatccttgaacatcttatccaaacgatcaacaatca aggtctaatacagaaagccatcaacaagaagtggaatttaacgcagttcctcactgaggcagctcaaatggaggatactt cactctaagtaagtggcattaaaattcctgaagatgtaaagaagctgagtcagaaatgggaaagacgcaaaccttgtaaa agccaagaaaagcatcctcgtcaatactgtggacagacgggaactcatccagcaagaaaaaaattgtccagcatatggca aaaagtgctcaaaatgcaagcgatttgaccacttcgcagcagtgtgcagagctgggagtagaaacaagaatcacaagcca aagtcaaagcaaccaaagaataaagaatggaagaaacatttgaagaaagccacaaaagagtcagcttccgataaccccac aagctctgatgatgaatttttctgtcaagcagtgagacatctcaagcaagtcaagaggattaaagcagaagagcaggaca aaaccattactatacagatagaagatgtaagtgtcaagatggaaccagacagcggagccgagatcaatgttatggatgaa catcagttcaaagcactaatccaccgagccagcacaaacctgactctgacaccaagcaagacaaagctgaacacccttca aagagagctacctgttaaaggcgagttcacagttaccatcagaaacaagactcgtggtgctagagcaagatttgtagtag tcaagggcagaatcaattctccacccctcatcagcaaagacaccctccaggaacttggactgttacagatcagacgagat ggttcattcgcagagattaatgaccttcgaatacatgaagaagcaccagatgtgaaaactgtcaagagagaaagccccaa ccctgaaattaagaagatcactgagaagtttgctcacatcttccaaggcattggcaagattagggacaaaaagaatgatc aagaattgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgttcagccaaagccaaagttttgcaagatgggaaa agaaaacctagaaccacacatgataagagccagcgtggacctcagggtacccaaccagtacatggagaggcacaggataa ctcaaggaactgtggtagaagattttatgtacaaattcaatgactgcgtcatcttctccaaactggacatgaggcaaggc taccatcagctcctactagatcctgaatcgaagaagattgctacttttagcaccccatggggaaactttagaccaaaacg tttgatcttcggcgcgaaatcatcccaagacctcttcgatgaaaccatttatcgcatatttggggacatatccagatgcc ttaaccagcgtgatgacatcttgctaggtggaacaaaccttgaagagcacaacaagaccctagaatctgtgttacagcga gcatcagattttggcattactttcaactcagacaagtgcctgtttggggtcagtgagattgaattatatggacaccaatt cactaaagacggaattaaaacccagcccggagaaagtcgaagctgttaaagaagccaacccaccagaatctaaagaagcg gtcaggagcttcttaggtatgacaggatacctatcgaagttcatccccaaatattccacactcacggcaccattgcgaca gctcacacataaggacgccaagtttaaatgggattcggaagagaaggaagcattcgaaaagctcaaagcaagcatcaaaa gcgaaagcattatggcctattttaacccttccagacccattgttgtgagagtcgaagccagctaccatgaaggactatca gccgggttattccagaaaacagccagtggtctccgtcccgtccatttcatcagccgcaccatgaccccaacagagaagag atacagccaaacagagaaggatgctcttgcaatccactgggcgaaaaacagattcagcatgtacctcttaggagcgccaa gattcaaaattgtcacggctcacaaacccctcctcccactgttcaacaaagcaagaatcaagttacctttccgaatagag aaatgggttatggggatgcaggatgtcgacttcgaactcctctacgaaccaggcaaagatgaagctgatccacttgattt tctgtcaagtcacccattaccaatgacaggcaatgatgctgtagagaaggtaatcaaacacgtggtcaccacagagcatg ccattgtcatggacaacatcagagaagaaacccttaaagatcaccaacttcagaagttagctgctagaatacaaatggga gattggaacaagcataagagagatccggacatatcgtgcttttatgaagcactccacgaactctttgtagtggatgacct gattcttcggataaacaggattgttataccttcaagcctccaaagaaaagtgatcaaagcagctcaccatctgggatatc ttggcatgactaagacaaaacagatgctgagggaaaagtattggtttccctcgatgaatgtcatggtagaacaaatcatt ggccactgctacgaatgttctgtgaccacaaagcagcacagacaagaggcagtcaaggttacagacattccaaagaaacc atgggatatcatagccgtcgactttggtggaccctatcccgacggacactataatctggtagctatagacaagcggacga gataccacgaagtagcgaagacccactcaacagcagcaaaaccgacaacaaagaagttaaaaaccatgttcgcaacacac ggaacaccgaggcggttagaaagtgacaacggacctccctttaactccaaagaatttgcagaatttgcttagacagaggg attttatcatcaccgcgtcactccagaacatgcacgtgccaatggagaagctgaaagttttatgaagttgttaaacagga cagaacagatcgcccatcttcaaggacga |
Protein
Protein ID | aug_v2a.06829.t1 |
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Definition | - |
>aug_v2a.06829.t1 MEIANGLVKIIVDSGASCNVLPRKFLPRDTEIKKTSLKLTTYTKTNLKVLGVAKVSLRNPKKKKKYRAEFAIIEEDYTPL LRSSMAQQTGLLTGQQENILQVKESYQEFNMERIAATYPDVFKGLGCMEGALHLEVDESTLPSIMPPRGVPLALKKRLGE ELACLEKASVIKKEEEPTDWVSSLVVTEKPNGKLRVCIDPQHLNKALKRSHYPLPVIKDILPELADVKIFSKADLKDGFL QIQLDQKSSKLTTFQTPWGRYRYLRMPFGISPAPECFQRKLDSNLEGLKGIFKVADDILITGRGKCKEEALKNHYANLLK LLDRCRERNLKLNREKLQLKCTEIPFIGHVLTSEGIKPDPGKIEAVLKMERPSDVAAVRRLGVQWNWSIEQEKAFESVKQ AVNSAPILRYFNSNEPVEGQGDPSANGIGFVLMQNGQPVSYSSGALTKSERDFSQIEKELLAQVFGVEHNHQYVYGRKVV L*RELIQQEKNCPAYGKKCSKCKRFDHFAAVCRAGSRNKNHKPKSKQPKNKEWKKHLKKATKESASDNPTSSDDEFFCQA VRHLKQVKRIKAEEQDKTITIQIEDVSVKMEPDSGAEINVMDEHQFKALIHRASTNLTLTPSKTKLNTLQRELPVKGEFT VTIRNKTRGARARFVVVKGRINSPPLISKDTLQELGLLQIRRDGSFAEINDLRIHEEAPDTSACLGSVRLNYMDTNSLKT ELKPSPEKVEAVKEANPPESKEAVRSFLGMTGYLSKFIPKYSTLTAPLRQLTHKDAKFKWDSEEKEAFEKLKASIKSESI MAYFNPSRPIVVRVEASYHEGLSAGLFQKTASGLRPVHFISRTMTPTEKRYSQTEKDALAIHWAKNRFSMYLLGAPRFKI VTAHKPLLPLFNKARIKLPFRIEKWVMGMQDVDFELLYEPGKDEADPLDFLSSHPLPMTGNDAVEKVIKHVVTTEHAIVM DNIREETLKDHQLQKLAARIQMGDWNKHKRDPDISCFYEALHELFVVDDLILRINRIVIPSSLQRKVIKAAHHLGYLGMT KTKQMLREKYWFPSMNVMVEQIIGHCYECSVTTKQHRQEAVKVTDIPKKPWDIIAVDFGGPYPDGHYNLVAIDKRTRYHE VAKTHSTAAKPTTKKLKTMFATHGTPRRLESDNGPPFNSKEFAEFA* |