Gene
Gene Model ID | aug_v2a.06847 |
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Locus | scaf2555 : 47837 ... 53705 : - |
To GenomeBrowser | scaf2555:47837..53705 |
Genes list of scaffold | scaf2555 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 29-1 |
Description | This gene model has RVP and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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retrovirus-related pol polyprotein from transposon 412 | GO:0005488 GO:0016740 GO:0090304 |
Transcript
Transcript ID | aug_v2a.06847.t1 |
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Definition | - |
>aug_v2a.06847.t1 tggaactgtggagacaggggacacatgcgaaaagaatgcccaaaactcaaagcaagaccaaattccagtcaaccttcggg aaacgagaacagggtatcctcaagggcccagagggatgcctgaatgatgaagggtcgcaattgagtgacaatgttgctga caacttcaaagagagtgaaaacgtgactgtaatgcgtgattcaaaattccgaccgtgtggactgtatgttattggattta ttggacagtataaacttgtctggcttctggacactggagccgtgagaaacattttatcctacgaatgttacaaaagattg ccccacgatttaaagtttccattgcttcaggatggttcacaagtgttggttgcagatggtcgcagagccaatacgtatgg catagggaacttaactgtgagggttggaaggcaagacgctaacatgagtgtgttggtggcagacattgaagattgtgcta tattgggtatggaattcttgtctgctgttgatgcgaagatagatctagtcgaacagcaactggtgattaatggggaggaa attgactgttgtaaccagaattgtcagcaagttagcttcaggtgtgtaacccgtcgtctcgtgacaatacagccgcacag tgagaaagtgatccccgtccatctcttccatcgacagtcgtcgcccggaactgccacgcaaggcttgcgaattttggagc cctgtggcgctcgccttcaggaaaagggacttaacatcggcagaaccttggtttcggcaggaggaaccagccttgttcct gtgcgaattctgaacacgtctgatcaaacacaaacccttggtgcccacactgctgtagccgtagccaaagcggtgactag tgttgcagagttggaattgcctcaagttgattcagagagcagcacaagtgaagttcaccgaaaccacccagtacaaggaa acattaccaggtcccctgaaagaactatgggagcgtagcgcagaacagttgacggaggaggaaggccatgcagttgctaa gttgttgcaccgacataaggacatattttccttatcggaacaggaccttggcagaaccaaattgataaaacaccacatcg atacgggcgacgcaagaccaataaaacagcaacctcggcgtgcctcaccatcaaagcatatagagattgaaagataagtg gaggatttattgcaacgagacatcaccaagaagtcaaacagcccgtggtcgtcccctgtagtgttggtgacgaagaagga tggctctcaaagattctgtgtagactataggcaggtcaatgcagtgaccatcaaagatgcttatccactcccacacatta acgattctctgtgtgccctctcaggggcaaaatggttctccacgttggaccaagcttctgggtattggcaagtcccaatg gacctagctagtagtggcaaagctgcttttgtaaccaccagtggtctctacgagtggaacgtcatgccctttagccttac ctcgtcaccaagtacttttgagcgattgatggaattgattttagcaggactgaggtttgtaacatgcttgatttacttag atgacaccatggtgtatggaaaaacctttctggaagagctggagcggttggaggaggtcttcgttcggtttgaatctgct ggacttaagctgaaacctggcaaatgtgtgctgttccagaagagcgtcgcatacttgggccacatcgtgtctgagagagg tattgagacagatccttctaaggttgaacgcgtgtgtgagtggccggcgccagagagtgccacggaagttaagagcttct tgggacttgccagttattatcgacgttttgttccaagctttgctcaagtggccaagcctcttcacagattaaccgaagct aaaattgactttgtctggacaccggagtgcctgtcggcatttgatatgctgaagaacctactgtctactgctcctgtatt gtcatatccggattttacagcggagtttatacttgagtcggatggcagtaatcatggaatcagagctgtcttaagtcatc tgaaggacggagtggagcatcctgtttcttacagcagcagatcgttgactaaagcagaaaggaattattgtgtgacacgg aaggagctacttgctcttgtggagtctgtaaagcattttcgccattacttacatggtcagagatttcgcatcagaactga ccatgcgcccctccgctcggtcctgaaagttaaagagccagaggcacaattggcaaggtggacagagttccttagtccat ttgagtacgggagggtcaacggcataccaacgcagatgccatgtcacgaagatcttgtagcgaaggctgtaagtggtgta aagagtggaagaaagctgaacaactgatcagcgtcgctgtagagactgagatttcgatttccaagacggaagagcttgct gaagaggaagcggatagtactcaggttgagaggagtgacacagaaccgtcctccgctactggtgaacattgcctgccaaa tgatctacctagtcccagatgcaacacgatcaagttagaaccgacctggacccgggaatatcttcgtcttcaacaggcaa cagatccaagtcttaatgtgatgctacagtttaaggaacaaagtcccgtcagactaaagtgggaagaggtatccccttat gaccaggttgtcaagtcactctgggcccagtgggaacaagtggaaatccatgatcgagtactgtgtnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnattgctaaggtcttagcaggttccttgccactgggacagtgtcttttaagggagggggtagtgtagcggctatacccc ccttaggaaagtttgtgtaccagtcccgcccaaagttagtggtgttcttgaattaaaaacagaacgtaactactggtcgg tgtgttatattcaagctcgttactagtatttagggtcaagatatggaaccatcacaatatgatacggttaaaatgcttct ccaaagatttgattcagccaaatttgtgcaatcaagatatataacccaagaggaggtcatcaccaatggctcttgcaaga gactttcgaaaaagactgatgtgacacaaaactcgttactacaattcgttcgcctgacagttctggttttgctgaattta gcgaagccgttttcttttgtgatatactattttaccaatctgcaaaccagacctggatgaaatctaatttgtatagctgc tcttcgtgcgagtgacaaacatgaagcctggctaaaaacttaaatttgaaaaactaaagccgacgacaagaacgtgccag cttcccctttgccttgtttatcgaagtccaaaataattacctgaaaatgtacaatgaaagcaacatacattgtagagttt cttcttatttttcatcaaataacataatttacagatgttacaaaaacgaagacctctacaacacaggcctaagaccctca gtagatcttacgacctttaaagccgtcctagtttccgtactgaaagctcttcacaagctcaacttgatttcgatgatcaa aacgctggtccgtacctcaaggcaagttcaaagcggacagactgccaatgatagtagttgctaaataatatatctgtgtt gcaactgttcatcagtaggatgcctaaaatgtgtgcaattctacaattggtttcggctccattaaatcctataccaattg cagaacatttcaggaggagccacccacaatgtgagcacagttacggacaacacatatatatgagtaaggaaaaaaagtaa tttaaaattttttcacttgacaaaatcctatcgctaacatggcaagtcctctaaactgtctcaattgtcaaagttgatgt taaaattttactcttcatcatcagtaaaaggactggcagacaatgttttaagttatgcaaactagtgccacgagtagtgg cgtgaccttcgcgtgaccgcaagtgtcagattttcaaccaatgaaatctcgataagtgttattattagctttaaaacgag ggaggaaatccgttatgataacaaattccaccagtttcaataacattcatttgttcgtagatttccgtatttttttctcc taggaaatgtaccttctttttattggtaaatatataactgttcgtcagctttttaccgctttgtcctcttattgatgata aagttgccttcatgatctcttctacgatatttcatttcatgttgtttccatttgcttgtctttgtgcggctgtctttagt ttgttggattcattcccggcgagaaaaacattccgtcgcggaggtttttcctgcggggaaggaacccagtaacagtaaag acagctgcaaaacgacaagcaaatggaaaccacacaaaacaaaacttctgctggcagggtaaaacactatgaccatgtct atcatacaattttatcatcaacaagaggactgacgtaaatttgttaaatcgaaaacttatgaaatttgcacatgtgtcaa tcccaaatctgagtactatattcttgtctattttcaacagggatgaattttgctgttaccctgttaccaattttcttact gtcgaggacaaaaaccgtgacttcatgtacggcatcttactccgtgcaaggacaagctcttcaaaaccacatgttcaagg aagagaccgctgagcgcattgtggattgcatcgccctatgcactgcccatccgggttgccatagcagcaacttttaccgc atagaaaaacgatgtgaattaaacgataagacgcatgcgtcgcacccagaagacatggcacatgtaccgtataccattta catggaaaacattttccgaccttgtagaaacaacctcaactgtgaaggtatgccttgcgctaaagttatgttacaattca aatgactgatataacgcaccagttcggaagaccgcgctagctatttgtaatcgatagagatcgaaacctaacttcttcgc gccataaaagcagagttaccactacaagtcaatgtaaatattgaatttgtctctctcgccacagaatgccgcattcagcc ccttggaatggaaaatagagagataccaaacggggcagtgacagcttcttcgacttatacaccatctgcagggtgcgaac catggcaggcccgccttaacaatnnnnnn |
Protein
Protein ID | aug_v2a.06847.t1 |
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Definition | - |
>aug_v2a.06847.t1 MPKTQSKTKFQSTFGKREQGILKGPEGCLNDEGSQLSDNVADNFKESENVTVMRDSKFRPCGLYVIGFIGQYKLVWLLDT GAVRNILSYECYKRLPHDLKFPLLQDGSQVLVADGRRANTYGIGNLTVRVGRQDANMSVLVADIEDCAILGMEFLSAVDA KIDLVEQQLVINGEEIDCCNQNCQQVSFRCVTRRLVTIQPHSEKVIPVHLFHRQSSPGTATQGLRILEPCGARLQEKGLN IGRTLVSAGGTSLVPVRILNTSDQTQTLGAHTAVAVAKAVTSVAELELPQVDSESSTRAKWFSTLDQASGYWQVPMDLAS SGKAAFVTTSGLYEWNVMPFSLTSSPSTFERLMELILAGLRFVTCLIYLDDTMVYGKTFLEELERLEEVFVRFESAGLKL KPGKCVLFQKSVAYLGHIVSERGIETDPSKVERVCEWPAPESATEVKSFLGLASYYRRFVPSFAQVAKPLHRLTEAKIDF VWTPECLSAFDMLKNLLSTAPVLSYPDFTAEFILESDGSNHGIRAVLSHLKDGVEHPVSYSSRSLTKAERNYCVTRKELL ALVESVKHFRHYLHGQRFRIRTDHAPLRSVLKVKEPEAQLARWTEFLSPFEYGRVNGIPTQMPCHEDLVAKAVSGVKSGR KLNN* |