Gene
Gene Model ID | aug_v2a.08045 |
---|---|
Locus | scaf3056 : 42426 ... 46390 : + |
To GenomeBrowser | scaf3056:42426..46390 |
Genes list of scaffold | scaf3056 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 32-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 32-1. This gene model contains rve domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08045.t1 | gi|542197503|ref|XP_005473293.1| | PREDICTED: uncharacterized protein K02A2.6-like [Oreochromis niloticus] | 0.0 |
Transcript
Transcript ID | aug_v2a.08045.t1 |
---|---|
Definition | - |
>aug_v2a.08045.t1 catatgaccagtttattcccctaaacacaacaaattggcgacgaggattgcgatcgtgatttactacgatgtcacaacca ttacaagctcagtttggcattctggagccgttcgatggcgtcgattttacagattacagtgaacgcttaaactcctattt cgtggcaaataatattggccaagttacagcagatgcttccgatactgccaaacgagaagcagacaagagaaaagttgccg ttacaatttccctgatcggtaagcaaacgtatagcactcttaaatatctttgtttaccaaatttacccgcggagaagaca tacgatcagcttgcagaaattttgaaaggctattacaaacccaaagtacttgaagttgcagaatcctaccgtttccatca tacacttcagagtgaaaatgaaactgttactgaatatgctaacaagttgaaacgtttagcagtgaactgtaattttggta catatcttacaagagccttgagagatcaattcgtggggggtgtgaaaagtcaagctacaaagaagaaactactttctgag gaccgtactttcgaacaagcgttaaaggttgcccaagcagacgaattggccgaaaaagaatccaaacaacttcagtttaa ttctactttaagtgctaaagttcaggctgtgcagtctgtaccaaagaaatcaagtctagcacacccagtaaacaaaaaac atgtagcgattaccgggaaaactcctgcgaaattttgttttcgttaaggatcctcacaacatttggctgataagtgcagc cacagcacatctgtttgtaacttttgtaagaagaaggatcatatagccaaagtttgttttaagaagaaaaagtagggtag ttgcctcacaactcaccttgttacagctacagctactcaagaagtaaacactaatgaaggtcatggagacactcccgacc gttttacagtctacatgcggagtgtaaaatcttctgaagtcccacacctactccaccactttacaaactttcagttacag ttgacaataaagagtttccgatggaaattgacacggccagtgctgttaccttgttaagtgcttcagatttttctaaactg ggagaccacattgaaaccctaaagagcccaactgtgattttgaaaagctacactggcaacattattgagtgcttagggga aaaggagatggaattaaagattggagaccagctagacacactgttagtccgtgtggtcaaaggtccatctattcttggtc gtgatttgatggctaagttcaaactactttggcagaatattttccacatggtttcaactacaagtgaagatattgtgtcg cagtatccaaagctgttcgacaacacaacagtgggaaaattaaaagacatccaagtcccactgcgagtgaaagaagccaa tcctctttttattaaaccaagagtagtgccttttgcaattcgttccaagtacgaagacgctctagagaaacttgtggcag aggacatcatcgagaaagtggaacattccgaatgggcctcacctacagtgcctattgtcaagccaaatggtgatttgaga atttgtggagactactcagtgaccagaaataaatttttagtgatggaacaataccccataccaagccttgaggaactgtt aagtaaattgtcaggaggaaaacgttttaccaaaattgatttatctcaggcgtaccatcaactcgagcttacacctgaaa gtaggaagtacacaagtacgcgtcagggtctataccaatacaagtgcctaacgtacggagttacaagtgctgtgtccatt tttcaacgcaccatcgaaaatgtgttgaaagaccttccaggttgttgtgttcgtattgacgacatactggtatctggagg aacagatgaaatccacctggagaatcttcatcgtgtgttacagagactacaggagggcggactcaagttgaaccccaata agttccattttatgctagaccaagttgtgtagctaggcacaactatttcagctgagacaatttcacccacaaaagagagg gtaaaggctatcagagaggcagaagcaccaatcaatgtgccggaactgcagtccttcctgggaagtgcaaacttccttcg caaatttgtgccagattttgcaagaattgcctcacccttgtaccagttactttgtaaggaaacacgctggaaatggggga aactggaacaagaagctttccataacctcaaagcggctctgtgctccgattctgttctacgacactatgatccaacttcc aaattgatattacagtgtgacgcctcctctgttggcgtgggagcgactcttcttcaactgggaccagatgattatctact acctgttgcatacgcttcaagaatacttactagtgcagaacagaactactcccaaattgaacgcgagtctctagctatcg cttttggagtaaccaaattccgacagtatttgttgggaaggcattttacacttctcacagatcacaagcctttgatcatc ttaatgggggaacataaacctgtacctcaactggcttcagcctggattaaacggtggtccttgcttctagctgcctataa ttacacaattgaattcattcctggcaacaaaatgtgtatgcagatttcctgtccagaagacccattgaggctgacccgtc tcatgaggaacaagtgacagtgaatgttatgtttattgaaagagatcagtttgtaaatgcatctattgttgccagtgaga cgaagagagatcccgttctgagtaaagtattacacagcatggttggcctgagaaaccagaaccagtgtttcaaccctatc ataacaagagattggaacttactcaggaggatggaattcttctgagaaaacctgagaaacctgagaaaccagaaccagtg tttcaaccctatcataacaagagattgaaacttactaaggaggatggaattcttctgtggaattctcaagtgatcgtacc agaggtactgcgcaccttgttattgaacgatcttcacactgaacacttgggaatgataaaaatgaaacaactggcgagga gatacctgtggtggccaggactagacaaagaaatcgaagaaacggtaaagctatgccattcttgtcaagaagcagccaaa actcaaccagcaccaaaccctgcatcgtggtcatggcccggcggaccgtggaaaagattacatcttgattttgctggtcc atacttaccaaagatgtacctagtaatagtagatgcctactccaaatttgttgaggttgtgccaatggggcaagctacaa caactaatactatcgctgccttaagacgtgttttcagtttacccgaacatctggtcaccgacaatggcagtcagtttgca agtgcggagtttcagaattttttaaaggtgaatgacatcgaacatacattgacagcgcaagggcatcctgcaacaaacag tcttgtggaacgctatgtcggagaattcaaagataaactaaacaaaattggagacacaggggagactgtccagacgaaac tagacagtttcttactaacactcagggctacgcctacatccttgggaaaatcaccttctgaattattgatgaatcgacaa cctcgaatcagattcagatctttaagatttaagacaagcaatcaagaagttaaggttttccaacataacctagataacaa gccaaaattcaaaccagagcagtcggtgtttgtgcgaaattttggaaaaggtgcaaaatgggtaccaggtaggattacag aaacagtcagtccaaggaattttaatgttcaagttggagattgtggagttgtggaaacgacatgaggaacaactccgacc tagactcatccctgccgaccagtgtatcgatcgagaggttgaaca |
Protein
Protein ID | aug_v2a.08045.t1 |
---|---|
Definition | - |
>aug_v2a.08045.t1 MSQPLQAQFGILEPFDGVDFTDYSERLNSYFVANNIGQVTADASDTAKREADKRKVAVTISLIVTVDNKEFPMEIDTASA VTLLSASDFSKLGDHIETLKSPTVILKSYTGNIIECLGEKEMELKIGDQLDTLLVRVVKGPSILGRDLMAKFKLLWQNIF HMVSTTSEDIVSQYPKLFDNTTVGKLKDIQVPLRVKEANPLFIKPRVVPFAIRSKYEDALEKLVAEDIIEKVEHSEWASP TVPIVKPNGDLRICGDYSVTRNKFLVMEQYPIPSLEELLSKLSGGKRFTKIDLSQAYHQLELTPETETISPTKERVKAIR EAEAPINVPELQSFLGSANFLRKFVPDFARIASPLYQLLCKETRWKWGKLEQEAFHNLKAALCSDSVLRHYDPTSKLILQ CDASSVGVGATLLQLGPDDYLLPVAYASRILTSAEQNYSQIERESLAIAFGRLELTQEDGILLRKPEKPEKPEPVFQPYH NKRLKLTKEDGILLWNSQVIVPEVLRTLLLNDLHTEHLGMIKMKQLARRYLWWPGLDKEIEETVKLCHSCQEAAKTQPAP NPASWSWPGGPWKRLHLDFAGPYLPKMYLVIVDAYSKFVEVVPMGQATTTNTIAALRRVFSLPEHLVTDNGSQFASAEFQ NFLKVNDIEHTLTAQGHPATNSLVERYVGEFKDKLNKIGDTGETVQTKLDSFLLTLRATPTSLGKSPSELLMNRQPRIRF RSLRFKTSNQEVKVFQHNLDNKPKFKPEQSVFVRNFGKGAKWVPGRITETVSPRNFNVQVGDCGVVETT* |