Gene
Gene Model ID | aug_v2a.08695 |
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Locus | scaf3313 : 32756 ... 35925 : + |
To GenomeBrowser | scaf3313:32756..35925 |
Genes list of scaffold | scaf3313 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-DLC-with-LRR |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Ciona dynein light chain with LRR (Q8T888). This gene has leucin rich repeat. This protein seems to be very short compared with the Ciona gene. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
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aug_v2a.08695.t1 | gi|530581695|ref|XP_005284709.1| | PREDICTED: dynein light chain 1, axonemal isoform X2 [Chrysemys picta bellii] | 2.0e-24 |
aug_v2a.08695.t1 | gi|564267622|ref|XP_006272616.1| | PREDICTED: dynein light chain 1, axonemal [Alligator mississippiensis] | 7.0e-24 |
aug_v2a.08695.t1 | gi|533193405|ref|XP_005409472.1| | PREDICTED: dynein light chain 1, axonemal isoform X2 [Chinchilla lanigera] | 1.0e-23 |
aug_v2a.08695.t1 | gi|558187352|ref|XP_006128668.1| | PREDICTED: dynein light chain 1, axonemal isoform X2 [Pelodiscus sinensis] | 1.0e-23 |
aug_v2a.08695.t1 | gi|530581693|ref|XP_005284708.1| | PREDICTED: dynein light chain 1, axonemal isoform X1 [Chrysemys picta bellii] | 2.0e-23 |
Transcript
Transcript ID | aug_v2a.08695.t1 |
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Definition | - |
>aug_v2a.08695.t1 catatataaatatatatgtaaatatcagttgttagtaaaatccaaccagtggtctattatcaatactgcgttctgattgg ttgaactactacaatggaaccttgatttaacgaagtcgctggggaccgaccaaatttgttcgttaaatcgagggttcgtt atatcgaaaacctcgacataacgaactgcaggggaaacgaccaaaatgttcgttatatcgaggtcatagtaaatgattga tttgtaacacaggtgacctctgtcacgtaattcaacgctatttttgtcactcagaagcggcgtgttttgagatgtaattc attaagcatggtgggtttcactagcaattattttcacttttaagcagacgcgcagcatttttttacaaaagaacgacact ctcagagcagcgatttaaaactgttgcaacatggaggttatacagaaaactatgtaaacaaggaaacaaggaaacgggct ttagtgttgttatgtcaccctttatatacccaacttttccggatttcgaagatttcatgttttttctttaatttccgtac ctttgctgtctctttactataaggattaaagtatttgttgactgttgatctgttcagcgttcatcgtctgtcgcgtgtta acattgtaattcgttacatcgagatagattttacatttgggcttccggattatgttcgttatatcgaggaattcgttata tcgaggttctattccatacattttactgtaactttggccgggacatagaatatcgttcgttatatcgaggacttcgttaa aaagaggttcgttaaaacgaggttccaccccggggttccactgtacaaggctttatgttatagcccactagtaccgaaaa gtgccggccatgtttgtaatgttttggcggcaaaaaaggatgtaagtcttgcttaaactagcgaaagatgttttgtttcg atacttttctgccaactagttggattttactaaaacaattattcctctcgatctcnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctcatacattgcgatccccagaaaggaggttagact gtacaccaacatttactgtttgtaagcattgacttgacaaccttttttgaaaatcaaatttccgttttcattgcttttgc ggaaacctcatggataacgtggagtgctgatcctgtggaacattaaatatttttgacgctcagggggacagaaaattgag tcaacattttttgcccgggggggactcctatacggaacagacgggggatgctcgtcggagattttgaatttaacccctaa aggagactatctgggtgtggcataagcaaattttgacccctaaaagagaccgcttaaaaacgaaaaaaagaaagaagaaa gaaaatttgacttctgtttctctttgcgtaattctgtgtttcttcgcggaaccctaaacgagaccttggcggcttaaaat atcggcgctttgccctgaacaccctgagtgagaccaaaatccaaaatttacacccagtctaatttttggcttatatggtc aaatctatactttttttctttctcaggagaagaagcatgagtgcaaagctagtgaagcaacagaaatcaagctttatgct caatacccacccatagaaaagatggatgcatccttgtccactctcgccaactgcgagtaagtggccctgtttgctaagcc ttgtagtttccttgaaatggtgacattcacttgtatctcacttgatgctgttaatactgataaattaactggaggttcat gggcattctcagatctcttatggttttatgcagtgcaagtttgtacctcaataccactgtataactggatcttggaactg ttcattttacaggaaactctctctatccacaaattgcatcgagaaaatcgctaacctcaatggcttaagtaagtccatgg aagtacattttgttgatttaatccattttaaatttctgtgagaaaacattaagtgtgaggcataaggtaacagacctact ggatttccagggttatttatctgatcactgattacaactactaactaattggccagattacagtggtaaggtaatcttct acttggtacctttgccacttgtaatccagtaagtgacaatttctttgggagaattcaaattatttcttaccatacactag cagtatttgtgtaggccaagcttaagatattactattttgactttgtaccaataagtaagtttcgctagccttacaagtg cttaaaaaattgagaataattaatattgaaatagacggctagtgattttgattagcatataagagtaaaggaggaaagat acaggtaccctgttatttgttggccaccatttttgtactccaagaacttaattttctaatgttagaacttggtaaacaaa caacatgtgtgaattaactgcaagttctctattaaagtaaaagcaaaggg |
Protein
Protein ID | aug_v2a.08695.t1 |
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Definition | - |
>aug_v2a.08695.t1 MEKKHECKASEATEIKLYAQYPPIEKMDASLSTLANCEKLSLSTNCIEKIANLNGLKLGKQTTCVN* |