Gene
Gene Model ID | aug_v2a.08790 |
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Locus | scaf3353 : 70927 ... 84634 : + |
To GenomeBrowser | scaf3353:70927..84634 |
Genes list of scaffold | scaf3353 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 54-14 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 54-1. This gene model contains F5_F8_type_C and fn3 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.08790.t1 |
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Definition | - |
>aug_v2a.08790.t1 cctgcagaatgaactcagttggactttcagatagttccatcatttatgatcagagattttcagcttcctcaagtctaagc agtagccccgcttccaatgggcgtctgaatggagccagtgcctggatacccagcagtaacaataacaacaatgactacct acagattgatctgggatctgtgtatgttgtttgtgctgtggctactcagggaaacccaagtgcaaatgattggacaaaaa catacaaaataaaaacctctttggataatgtgaactggcaatggtatcaggaaaacaacacagttaaggtatgtatggtg agggtggtatgtagctaggatatgaggcaagggttcttggttttatgattagcagaatgcgagcataactcaagtacatc tcttagtcatcaagcagatgacaatttagttgttcagtccaaaccaggtgactggaaatttccaggaattctattttcaa tctactgtgaaaattcacacctagattgaattcaagaattcctgggaaagcatttgtaggaaattcctagaaagttattt tgcaaggtaagagcacctgaatgtttctttagaaacttaaaactctttagacattacatataatcctcatacaacttaaa ggtgtcatactgatactatgataaccctgcttcccagacaaagagatgtcttgaataaataagtaagccctgatgcaaaa gctgttactccatgcaatacgtgggaaaagggaactcgtattggtattgcaataaaaattaataataatgaacaagtact attaaaagagaaatgttatatttcaatcttatcttaggcattcacagggaacagccaaaagaatgagattgtgaaaaatg atctttacaatccacttgctgttaaattcattcgtttttaccctgaggacttcaacaggaacaaagcattaagagttgga gtttttggatccaagcaaggtaaattttcctgttttctgtgagcaaaatataattgataaagccattgttggagtaatgt ttaatctaggggtcttattaactaagtaagtttggattttattaccttctctgttgagaggcttacaagaccaatcagtt cattaaggtagttgatatatatcgtgatttggagatgctaaatacctagtaaattttcatgtctgggtgggccttttgta cgtgttgcaggtcaaatttatttttaggttattctttttttaaaactagcttatttttgttccaactgggttgatttatg tattaattaatgtcttctgatactaaaattgggttttcgtgtccttttgttttaggtcccttttaactgttttttttttc atttgtattcctctgttgtttgtcagcagatttatctttctattgtgcacaactgacaccacgattttgaattagggagc attcataatttacctagagggggggctatgattttgagaggaggtcactcttttcttactgctatgatttaggggggctg tggaaaattatttccatcgaaaatgacatcgagcataggggggtcaaccatttttttcctgaaaaagaaaaggaaatgaa aatatgctgttgggtgctcttataattcctgtcttttatttcatttcgacaaaatgttgatacagaagttgagtatgaaa cttgatgcatgacgcccacttcttgtgctacaaggtctctttgcgagtggctcaaactcactctcatcaccaacactctc acgctcctcaatctcactctcctcacccttgctctcctttctctcatgctctcaaagagttaaaagatgatacagcatgg ccagttttatgtagtggtttaatgaagatcattagcatcctctaaacagatcttcatttaaaaacactgcactaacaact ggccatgatctagcagatcattagcttctaaatctgctggaatcaaatttatatggaatgtaggtacagtgcaagtaaaa ggatactttctctccagtaccaattcagatagttaaatttattatcagccaatcattcaatcagcttttctcaagaatgt ccaaactggaacaattttgaattaaaaatgtgtagagatttattttactgaacattatattttcttaaatgattattgac atcttgaaatatcaccatttcaagttgttactgatttactatgctaattacaaataattaacaattattcctcgagttgg tcaaaaaatatccagactaaacgtctttcacaagttaaaccttgaattcaatcctcttttacggccaaaacattacaaac atggcgggcgcttttcgctactggtgggctagtataacatatagcctactagtagctcaaccaattagaatgcagcattg atgatagaccactagttggattttactaaagctcattagtaaatttttagctcaggataatgattttccagctttctgat tggttccctaagctcatgatatgagccattatcattaagtttgaccaaataaggaaaaactgatggcaaatttcttgtgc tgaaattttggaggtcggaaaaaattttttcgcggcgtcgtcggtaaagaaaatgtcacgatttgaagaggtttcacccg aagaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnatgatgacaggatgtcatcgaaacgtcgaaatctgtccgcgttagtttttctgattaattccactgtatcacct aactaatggactaatgcaaataatgcatttgaatttgctattagtaatagtcattaatgagtgaaattcatgttgctttc tttcattttattctcaaagaaatatttcttcaacttgcatttgctaatcttatttttgccttttctgtccaactacttgg gtgatactaaaccaattagaccatttttaagatgacatcggcatattttcagcaggagaaaacacatgtaaatactttta agattaatttcagttgtcaatccattcaatacatataccaagccatgcagtgaaaaacaaaacatataattttgtgtcgt aattatacactttaaaaagtcatttctttgcattgcataacccctattttagtgttgtggaaagcacttcatggcatgtt catgtaacattctcttattggcatagttcttggaataaatgagctgtgcacaggtagtgagaatcagtgtcagaaccttg agagaagggaaatttgcttattaaattcctatgtacctcattggttaaattatgagtgattttggatctgtacttttaag ggtggtgaggaacaagatagaaaccccagttgtataaaagattacttattgattacctcaaaactcatttaagatatttc caaagaaagaaaagtaatttgtgaggctgcatggattttgaaaacttaaaaagaagtttgatgtttgaatttatactttt ctgctttgttcgactgaaaacaagttagcaaaacctttattttgttttgtttcatttttcagcatctcattggaaacagt gacaaaagttctgttgttgttcgcgtgttctcttccccatttgcagcacagtttgtcagaattctggcaaagaatcacaa caaagcacagtgtatgagagtggacctgtttggttgtagagattgtgagtgcagcatatttcataaggcttacnnnnnnn nnnnnnnnnnnnnnnnnnnggcagacatgtaataattcttcaatttgttattgagtaccagcacattttgagttttctcc ttcagggtgtaagttgtcaataaaagttgcttgtgtagattctttgagcctgcattttcaaaatattcccttaattctca acattatgatgcattgcgcagtactattaaccctttcctgcccaaagggttccccattgactagtaaaattgtctgttgt tagacagagtaaaattcacaaatgtgccaatcgggcaggaaaatgttaatgtcatttgtgatatgattatgaccaagctg cagttaaatatgtacctgtaagttgagattttatttatttgtggtgttcaacgtaagttaaatctgcttaccattttgtt gaatccaagaaatcagtgcataagaaatttgtatcaagcgagtggcacaattcaaggcatgtcacattaaagtctccaaa ttcaatgccatgctttccacataagagtgtttcaataaatattgtaagttttgggnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgtggctcagtaatctgttaataaatactagacgatcaggctacttgtac tacttgcaaaaactatgtttgcttgaatggaagatgtgttttcaatggggaatccatcttcgacattttacacaaagatc gttgtactaaatatagatcattgtaagcaaacaaaataaaattagttacaatgaaataagcatggttgttggtttacgtt gtcatttttcctttcttgttttcagttcaagttccgttcctttatgtggttgtcaataatgccaccttgcgagcggcaca tggtgcatctgttaagctgagctgcactaccaagtcaagcaaacaacggcctcatgctgtagaaaaggaatggaggaaag atggagttcaattggctgagtcaagttcattactaacaataacttacagcaatgcaagtgacaccaacaacaagtatcgt tgtgtatctttgagttcatcaagccgtgatgtccaatgcactgcagtctaccaatgctcagcatcacttgtcgcagttgc tggtttgcctgaaattaaagatctaggaaattctactgttactgtcatattaagtaagtaatggttgtgtttcagaagca ttaatggtgccaataatgaacactaatcatatcaatcagggacttcaccctacttcccccagcattattgttacaataat ttatcattattattgcttttataattattttacattgtaatttttttcatggattataaacgagtttcgaataatagtta ttcattggttaggggtgggaatgggggttactactgaaggcattctatggaacatttccctgtaacattgcttcacaggg gaaagcaaggacaatgttattaattcttataatatcttcgttagttttcacaaatattgtggtaattaattttgaagaaa cagttaacgtctttttttgtggaggaatgtgtcaaaagacaactgttagataagaccactacagttttcttttctttttt tttttaatttgagacagatgaaaattatttcatttttggcaacaaattgccaactgcctacaaatttttgcctggctgtg tgacaaagaatggccatgtgttccgcagtttgtacattcagcagtggaccgaacaaaggagaatctatccagtccttctt ttaaagagatgctgggtagtttgtgtctttgccactagaagtaaatttttcaacaggttgtaagttgttcttctaatatt tttgttgggctgcttgcttattggtttatgtgctcttctgttatgttattcagagaagccaggacagctaagtggtgttt ctgcaagtatggtgacagcaagaacagcattagtgacatggacgaattactcccctggagaagatgaagccccaactacc cggattactgtgcggtatataagcagtacctctccctattatttggccattctaccaggaagttcatctaggaaagagtt aacaaacctcaaacctttttcaaagtacaatgtcacagtcatggcatcaagtgtcttgggtgacggtttatggagtaatg ctgtgatccttgaaacgctgactgcaagtaagtttagccttaaattcacaacttacttaaactagttagtcacccattag gtacactgtaagttgcccattcttcaggtgtgttgtctccaggtatttttaagagtgttggagggggtttacaatccgtc ataccctcccccctcctgaacctgtcttgtcaacatgcacagtctattttaataaattatgtattaaaatagtgtattaa ttaacaccagttaagtgtgtgctctgtttggcaactccatatattatggcttgcagttgttccaaagtcttcctgcagtt gcattaaattttgaggattttttttatttggtacaaattgcagaaattcattctttccacttcaataagttattattcat gaacagattgcaaacagatctattagatgtttttggtgcatgatgttgatgtctgtgaactgcaggttgaaacatagtta caaactatggctgaaatgaattttcagtttatgatccctgaagtaattgcaagaaagacctgaaaagttcgagcctgaac agggactcgaaccgtgatctctgctttgccggttcagttctcaaccagttgagctagcaggacaactgagagctgtttta attatgaatagcttgttgttgtcattgtatgcacctacatgaagtaacggaacaaaaagggagggcacattattgcttat tccagtttcctgtggtatgagggctagctttgcagatttagtggcacaccctgagcttgtctcagattccttttcatgaa gccactgagggaattgcagggtctcccccgtagcaccatattgccagtgcagattttctaccttgagcggagagaaaagt atttgctcttttttttcagagccaagtacttctccttcaaacatcgcctcacagccattgaacgagaccagttataaaat aagctgggatcctttgacaagagaaaagagcaatggtgtagtgttagtctatgaagtgaagtatacaagggtgtaccacg tagggtcccaatcttcatttgcttcacgctatcaaaacacaacagacacgacggtcacgcttcaagggttgacattatgt tctgcttaccatgtctttgtgcgtgcatatacttcagctggtgcaggaccattcaatcctacactggaaattgtcactac tggtaggtatagtaatgatcatgtttattgcacctctgaaaaatcgtatgagagggtgctatcgtacaggtgcgtgtcat tgggaggcacaaagggagcaacctagatctacattaaatgatgtcacgacaaacaaaccaaacctcacaaccaggctgcc ggtagggaagaacattaatttttttcttctgtgggtgtagtagtgctggccagctggcaaagcagttgagcgaagaaaaa ttcatggcagtacgtttgcatgcatttgttgtattctccatgttgttctggtggagacagggtattgtttgatgcaccgg tttgctgccaacactgcatggcagaaataccagcctagttatatatttatgttgtaaataaaataacgaccaaaaaaaga aacaggtagaaaatatacattgtattgtggcgtgaccaaagtcacgcctcaaatccgccctgttattcatttgcagcctc tgctctaccccgtgatgtcaaggctggtactccaagtaaaagaagcgttatattatcctggaaaaagcctctgctctacg gagacaatgtaaaaatgtacacggtaatttatttacttttttatttgttccaaaattggtggatacatgggagatccaat ctcgatttgctaaagccgggcgcgcaaggtggtatcggtattgctgcaaacaactcctttacaccgctttgtgctgttaa tagtcttaaatcgtgattggtaattatgatttgagattatctaatttcatcacatgttttgctccaccgtcatgagcatc ttcttcgcccgagctagtagatttaacgaaaactactgccagtcataaatagtgagttaagagttaaaccacttaaagga cactaagtggtgtatgttaagttttagcgtgcaaggcctttttctgtgctttctgtgaaattgaatatgttgagataaag aacaacagacaaaaagctgatctttgaaaccgaaataactgaattgatttcattcccgggtggttgtgaatcaatttgaa cgacccagtagatacccagccaaagttatgtcatattgggccacaagcttatgctttgcactcgctttcaggttatttat gagggtacaaagaaatattatccggggttcaaacatataaattcagtgcaaaccggggcattgagtcttgaaattacgga tctctatcctgacacaaagtacaagtttgttgtggttgccacgacaccctgtggagatggggacaacagctccatggtaa taattcggacggctatagatggtaagttataatttcatgctgagctgttttaaaccactgtgctgtaatgagaaccactg actttacaaaaaaaggcactacaagaaggaagtactccttttagaatgctttttctttagcttttttagtcgttttcttt tttttaaagtatctattaaacatataatagaggaaaaaatacagattttgcaggtaagtcaaatcaaaatggtttcagtt tcgttttttttaacaattttgcttgtcttttatctgtaaagatgaataacttggatacaagatgatatggagaatcaaac ttcggtttgccgctgtaagagttgagatgagctcaaatacagcttttttgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnncaagaaacactaacaaagattgcgtgtccgtttgtaactggctgcatttaacatttgcagttacctgaaaga aaacgtttgtgagcattcaaacataatggtctttgaagatgacatttatggagctttgcttttgcccacagctccacctg caccaggaaatccagagggacccaaacagattgaaacgggagggtcttcagtaaatctgacgatttggcctgcatcacaa gacaatggtcccatcaggtaggtgttcatttacgctggcacataaagtagaaaaaatatgattgtgagaaaatgaagctg tttgtgaattgagattattgcagaatagtaatcagcgcatatctgctggtattcgtctggaagatgcgaagttataatca atcaatgtcacaaggcatgaagtgaaccaataagacctcaaattaatcttgctgctccttgcttgagttgattttagttc tgattagctcagaaaactggcgtgagatgttatcgtccaatcatgtcagatactgtaccatatacaccaatttatttaat ccatgtattctgttttattctttcagctattaccaaattttggtgcatagagttcaggattggtctgacacagtctccga ttggaaagattttggatctaatttctacatctctgcccaaattcctgcaagtgatgtaaaaaccaaaatgatgttctcac tcggtgatggagaaaataaaggtggttacaataacaaagagttgtcaagcggccagaagtacaagatttattccagggca ctaactgaggttacgtccaaggtagacattctatcaattgaatggttgcgggaattgaaaacgaaacaactggaaaaagt tacttgaccggtcacatttccgaattttgttcatgcgtgtgccaacttagttgttgacttgtggagttggtggaggattc taaacaaatccggttttcgatgctagttgtttgaagtgctgtccaggagataacggttttatatatactggtgtttaact attggatagtgattaatccagtggatagagctattaatctctgtaaactaccgaaaccagagcacagaatgtcgacgtac tacagctatattctgtgatcaaactaactttgcttttatttgatagaaacgttccactgatgagagatttctgattggcc aagcgcaactcgtagcccagattgaggtagaagcaggtaagacaacatgtcaagtacgttttcttcttccgtacgtctgc gttgcatatgtttttggagctaatgactcgagtgaaactaaagacaacttttttaatgtatgaaacaagtaatggcgata gtcacaaatgaaagccaatggatggatatattcctatatcttctgtccagtaaagaccgccaagccgtaacccctccttt tcaaggcacaaccgataaaagaaacatgacaatttgcatgttacttttggaggtagacggaaaaggagtaagaatgaaaa gttctgtgttcttttttcatgcagaacagagaaaaaaacacaaggagtttttcttgttcgttttgtcttagcaacatgtg tatgttcatgcttccaaataggacgaaaagaacagagaaattaccttgttcttttctcagacaaaacagaaaggaaacgg agttttttctgttcatttcactttacagcgtatctgtcttcatcattacaggcacaacgaaaagaacagagaaattacct tgctcttttctcagacagaacagaaaagaaaaaggaatttttcgtgttcatttttcttagcaacaccgagatttgccttc atgatggcagattccttgcggtctgatatagaattgcgagacttgttccaggactcgtgatatcgtgacactggaatgtc tgctcttaacgaaacacatcgttactttctcttgatttctatcagttgtacgtcgctgatatgttcacttttggcaaaca aaacgggcataaaagaaataaggtttctcacttgtgtggaattgtcctgcaacaaatggtattgtatgcctcgtttgttt cacaatttgcgctttagaatatttcaacagtcgccaatcgtgtgacgtcatttctcaaattttgaaaaaataatgggcct agtttagttggtgccatcgactcggattaaaatcagtcgtctggagtcgggagatcggagtcacatctacaggtttgatt ggtgaggattgggtgcaactttgtttggttagcttaactgttttatgagatttctttcaaactgcaggtcgaaaacaaga agttaagtaatcatctattgttgtcgttgtgcctttagttgtttttgttcttcttgatattactgaagtccttgtttgga tagtctctttaccacattttagagataaggcctcgcgttgacagcgatagaagggagcaatgggtaagaaatttacctct ttctcaaagatcaggaaacctgtttaatttctgctgatttcttgtctttactgcagctattaagcatctacgtaaacaga cagaactgagaaggaatgagaatctttgtgattttaggtcaaacatcaggtcagggttaagcgaatacgtgaagtcttat gtcttcagttgacatcagactcaatcagtcagcttacgtaaattcacagccacctatcccagtggggtggagcgagttat gttttcctcaacaggactggggtcacgtaattaatgcattatcatcacaagcgctagccaagagagactggatatgaaag ccaacagacttgaaagggtgagttattttttagtggttttgacatgtcacgtgatgttatgcgagtataactaaattcgt acattgctgccagctggtagctttcctgtaaaaagtacttctgtcctagttctgtctttaaatttaaaggtgtctctgca gggatgggaaaagatgggaaaagagaattgtggttaaatattgtcaaaatccacttgcaagaacttcaaatgctaaaatc caggccacactccgtcgtcactcacggcgtagagtcgagtatccatacattaatggggcaagtgatctgaattgaatatt cagtgtattttgaaaggttaaccaatagaggaggcacaaccgtgccattgtaagaaaaagcagcagttcagggaacggaa gatatacacaagcccatccctgtcatccagttctcagaatatgtgactcaattgagaggagataagtacgcaggatttgc caagcagtacaaggtaataacaacaaccacatgcgtttgaagttctatttagatttatttcaattacaaaaattccatcc taaaacattgacattatacgaatatgcggaaagtcaaatgaatatacaactttagacaaatggttttttttatactccgg tgtaagactcgccgtcgtgaccaattggcgtctttgccaaatgcctttgaccccccccccccctaaaatcaatgnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnagtttatcttcttttcttattcttatttaacattttgtttaatttttttttctttgtaccttaggagctaacc tatctcaaaatccaccatggttggcttagcagcgtctgttgtctttcattcttctggtttcagccgccatcttgtaatgc ctcttgttgaaagccaaatgaaagaggacagcagaatccaaagataaagtagaagacgatgatgatccccactccaccct ggctcctccacgacccagtcatcacgacattagggtaccgaaagtcaaacaggcagctgattctacagcaatgccgctgg ctactggaaataaatcttctcatatgcc |
Protein
Protein ID | aug_v2a.08790.t1 |
---|---|
Definition | - |
>aug_v2a.08790.t1 MNSVGLSDSSIIYDQRFSASSSLSSSPASNGRLNGASAWIPSSNNNNNDYLQIDLGSVYVVCAVATQGNPSANDWTKTYK IKTSLDNVNWQWYQENNTVKAFTGNSQKNEIVKNDLYNPLAVKFIRFYPEDFNRNKALRVGVFGSKQAQFVRILAKNHNK AQCMRVDLFGCRDFQVPFLYVVVNNATLRAAHGASVKLSCTTKSSKQRPHAVEKEWRKDGVQLAESSSLLTITYSNASDT NNKYRCVSLSSSSRDVQCTAVYQCSASLVAVAGLPEIKDLGNSTVTVILKKPGQLSGVSASMVTARTALVTWTNYSPGED EAPTTRITVRYISSTSPYYLAILPGSSSRKELTNLKPFSKYNVTVMASSVLGDGLWSNAVILETLTAKPSTSPSNIASQP LNETSYKISWDPLTREKSNGVVLVYEVKYTRVYHVGSQSSFASRYQNTTDTTVTLQGLTLCSAYHVFVRAYTSAGAGPFN PTLEIVTTGRYSNDHVYCTSEKSYERVLSYSSTCTRKSRGTQTD* |