Gene
Gene Model ID | aug_v2a.08841 |
---|---|
Locus | scaf3372 : 129514 ... 135055 : - |
To GenomeBrowser | scaf3372:129514..135055 |
Genes list of scaffold | scaf3372 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08841.t1 | gi|260803671|ref|XP_002596713.1| | hypothetical protein BRAFLDRAFT_122018 [Branchiostoma floridae] | 5.0e-33 |
aug_v2a.08841.t1 | gi|395529082|ref|XP_003766649.1| | 7.0e-30 | |
aug_v2a.08841.t1 | gi|674092120|ref|XP_008854172.1| | PREDICTED: nuclear pore complex protein Nup88 [Nannospalax galili] | 4.0e-29 |
aug_v2a.08841.t1 | gi|543365109|ref|XP_005525916.1| | PREDICTED: nuclear pore complex protein Nup88 [Pseudopodoces humilis] | 7.0e-29 |
aug_v2a.08841.t1 | gi|527246188|ref|XP_005141428.1| | PREDICTED: nuclear pore complex protein Nup88 [Melopsittacus undulatus] | 7.0e-29 |
Transcript
Transcript ID | aug_v2a.08841.t1 |
---|---|
Definition | - |
>aug_v2a.08841.t1 tcagtgtagaccaattaagaatattttgattgaaaatgatggtgaaatatttgtgtggaattcccatcgaaaggtcttgc tgacagcaaatctcaagaacttgcattttcaaaatgaacgtgcagacaaatttcaagtgagtagtttattatattaatta ccgggannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnaaaatgacatgacactttaacacttctggtaaatcatgaaagctggcaaatgtgatttgctatactcttctcac aaaacaaatacaatattgccaactgacaatgtgttgtttattacctacatgcagactttcgttttcactgatggtccttt gcatgatgtggattccttgctattcagttattcgtcaaagtatcttgcactagttggtcaaagaggattatcagttgttg aaatacccacaagatggggcaagttttctgcatatgatggtggaaatgaagaagttttgtgcaagtatgttatcctcatc aagtttatcacttttgtacctaactaatgcaccagtcatttgaaacccctgcacccccacccccccccccattcgggctt gagtggggcattcactttttatgcaagtgaaagtgagtgaagtccccagttcccagggacaaaagtgagtggtgcattcc cccgcccctacttttcaacacatggtaccccctttgtaaaacaacttattattgccaagcataacacactggttaaaaaa cactgttggcagccatgaaataaacagattgatctttgagcggccagcaaataacccggtaggggatgcgaagaccgtga cttcaagcgaattcccccccaaccagggaaccaaaatgaagtgtatacgaggtgaaagtcctggcaatcctcctctaagg cctgaatggggggagagggggtttctaatgactgactcataatgactatattgatgtgcctgtgtttatgtcataatatt gctttttactggatgtatctagagagctggagtaccccttttcttttcaggaaaatttccattgattcaagattctttgt tacctctggtaaaatgattcttgatgccaaatggcaccctggaagtcaggcagatgttcatctaatggttttaacctcag ataacaatttaaggtaagaaaatgatcctgaaaaggaattgataaggttagtttttgggaaactgtattgaagtgtctgg attaataataattattacttttcaatccacatgctctttgcaccgattggcatcctaaaattaaaccttgaaaaaagttg ttatcaaataatataagtaatataatgttattatagctaacgataagtggtagtatggaagatgtttctgatcacaagga tactataatatgctatacttcaacttttataatcagtgtctttgaagaccttgtatttgtccccttcattctttccagac tttataatgtgctgaaaccagcttctccagaagaaataattcccctgggagaggcatcgtcacagacagctgaatacagc aggaagtctatgtctctgggatcaatctcgtcatttgctgaagctttaggagaaagagtcatttcatttgactttgcccc tcctgttgctgatgtttatgccacaacaaggttaagatcatctgagacagatcaggaagttgcttaccctgtctttgtct tgaaagaaaatggtgacatcttgtactttaatcacagaattttgcaaagaaggtgagcatcatgcttgaaagaacagctc agtggctttcattttcttgttttacatttcaacaagagttacattaaacctgacaatggcagcaataatcatctgtataa ttttgggagggggggagggaaaatttcttttggaaatattcatttttgggggtggaagaaaccattgcaccataccatac cataggaaagcttcttgtccaaacccataacaagtcgcactgttcaatgttaccccattggtcactcctttatgacttgg attagaatgttctacataatttaagggtaccattcttgtcttgtttcagatattggccaacacaactaagtggaccactg actatgtacccagctgcagatgataattatggtctggatgcttgctctttgctttgtctgcattgccaacctcctgttct tgtgatggcaacaggaagcagaaaaatttatcactgtattgctttggaaaatgaaaaatctcatgatagtgagcaggtga ttaaaagagtaaatttggtatttcatctatccttcctttcagtgtaggtcatcttcattttgcctctaataggcaacaac aaacatgttgtaactcttttcaatcacacacaaaatttaaacatacatgatctcatagttaaaaaatgtgttctacatgt ttttgtgctttaggatctatgctcttggaatggattctctggtactgacaaaagggacagcatacaaccagatttttctc tctatgttcatgaatgtgtggagctacagttgtctctgttaccagaaactttagaatcacaatctgaaataagttctttt ggtgatgatttggatggaaatgaaaatcagtttcttttaaaacttcagaaaggtatttcaaagaaacacatcctgtacat acaagtaaaataatttatgttgagtggtaatcttggtgatcagaaataatattttttttctacatgataactgttgaact gatgttggtgatgatgacctccttttcattaaaaataatattgatctaatattttcagagagttaatatgatatcattgc aatgttgttgttgtaattttagatccatcttcaccatatcagtaccactgttcacatagcactggagttcatagtatatc cctaccttgggtcagcaatttacaagggttttgtgttcaaggtgacaatattactttgtacgtgtggtgtgcatcaatta ttataatttaagcttgcagtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nngaaacagtacagggctagggaggagataaacaaaaggtgagacaaatgttacaaatttgcttcttctatttttctgtt gactgaatttatttttccatcattttgctgaaacttattattccaatagagtaatttcctgtttcagaacatcattactt agaaacgaaaaggagaagcaaaaacagcttcttgagaaactccaaggccgtgacaaaaagttaaaggaaaaaacagagat gcttggagaaaagttggtatatacatcagaaaggcatgaggagctcttacaaaggttataatgtgtgttaatttagactg acaacctaccattctcaaaacaggggttatcagtcatttaaaactcaaattctaatcttgcagacttgaaggcttgttta gatatattcaaaatggcactccagtgttatctcaggccgaaagtacgatgaaaagggagttggaggatgtggaacgtttt ctcaaataccatagagaatcacttcaacaggtgtgttactctcaaatgctgatatattgtttatatctctttgcaaaagg acaatgatattgatatgttattgacttttgacattctctgtttttgctggagtgcagattaaagcaaagaactcctactc acaaaagagcccaagaaaatcaaaatcaccaaagtcaccagctgttaatgcatcacaagaaagaaacatcagacacttac ttaaaagcgagtgagttaacctcacttgatttagcttattatttacccctgtaccattgtctgaattgtttttcttgggg gaacttcagaaatgatacagaatgataatttattctcgttggttgatgagtatatcctttggagacttttaaagtgcatt tcctgttaagctggatgcattgattgatcagacaattaaaaatttcacattgttcagagctgatcctctggtgttcatgt tatgctccccatccacccaataaaatcactgaatcgaacctcccctccctactttatgatgtgtgattgctgggcagttt ggataaacctagcaaaagaagttgaaatgcttttgttttcttggataagagtaatttcctgcatgtggaaaatttggtac ctgtattaaaccccattacctagatttatattttgtctcatgctgtcttataactaacaaacaaatgatttggattatct tttttttacacacacaggaatgaaatgatcactgatctggtaaatcaggtcaaagacctacagctacaagttggattgta atgactgagaaggaaaagacgcagatatgtgaaataattctatcaaggaaacaacaagatggcagttctggtggcccccc attagcaaaaaagtgcccaaccagtttccctgcctttcagggtcagacattaaattatgtgtttgtttagtggactatat tgggatttggtcagttaaaacaaaactgtttaccactttgttttgaggtctctgacaacatgaatagtttccatttgttg attgggttgtcagtatgcaggtaattttacatcatggacaacaaaaaatgtgaaagtgaatgtgtatgattaaaataaca ttaataataaaaaatcatttag |
Protein
Protein ID | aug_v2a.08841.t1 |
---|---|
Definition | - |
>aug_v2a.08841.t1 MYPAADDNYGLDACSLLCLHCQPPVLVMATGSRKIYHCIALENEKSHDSEQDLCSWNGFSGTDKRDSIQPDFSLYVHECV ELQLSLLPETLESQSEISSFGDDLDGNENQFLLKLQKDPSSPYQYHCSHSTGVHSISLPWYRAREEINKRTSLLRNEKEK QKQLLEKLQGRDKKLKEKTEMLGEKLVYTSERHEELLQRLEGLFRYIQNGTPVLSQAESTMKRELEDVERFLKYHRESLQ QIKAKNSYSQKSPRKSKSPKSPAVNASQERNIRHLLKSENEMITDLVNQVKDLQLQVGL* |