Gene
Gene Model ID | aug_v2a.08869 |
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Locus | scaf3381 : 22996 ... 30859 : + |
To GenomeBrowser | scaf3381:22996..30859 |
Genes list of scaffold | scaf3381 |
Manual annotation
Study field | Photoreceptors / Circadian |
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Gene name | Adi-ARNT |
Study field | Transcription Factor |
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Gene name | Adi-ARNT |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). This gene model does not contain PAS_3 domain and therefore gxp0001300013491 gene model was used for molecular phylogenetic analyses. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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aryl hydrocarbon receptor nuclear translocator | GO:0001892 GO:0001938 GO:0003705 GO:0003713 GO:0004874 GO:0005654 GO:0005737 GO:0009636 GO:0010575 GO:0017162 GO:0030522 GO:0030949 GO:0033235 GO:0035326 GO:0042789 GO:0043565 GO:0043619 GO:0045648 GO:0045821 GO:0045944 GO:0046886 GO:0046982 GO:0061418 GO:0090575 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.08869.t1 | gi|156373864|ref|XP_001629530.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.08869.t1 | gi|62898650|dbj|BAD97179.1| | aryl hydrocarbon receptor nuclear translocator isoform 2 variant [Homo sapiens] | 0.0 |
aug_v2a.08869.t1 | gi|2702319|gb|AAC03365.1| | aryl hydrocarbon receptor nuclear translocator [Homo sapiens] | 0.0 |
aug_v2a.08869.t1 | gi|119573899|gb|EAW53514.1| | aryl hydrocarbon receptor nuclear translocator, isoform CRA_e [Homo sapiens] | 0.0 |
aug_v2a.08869.t1 | gi|260830027|ref|XP_002609963.1| | hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | aug_v2a.08869.t1 |
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Definition | - |
>aug_v2a.08869.t1 ataggaaaaatctggaattgtgctggttttacagacggctgccctttttagcgttattttcgcgtcacttagttgtcagg cctcctgcctaagtgtcatatcgctcttcacttggatcaagctgtttgtattcgggtgggaagtgtgcaaggaatcttat tgactggaatgccgccattgtagaagagaaaacacatctcttatttcaggctcgcgtttagcttagttctctaaggcatt accgtctttgctaatgactagctgttattaatagcatacaaactggatcccttagacgacttcgatacgtccaaaatgga cgactttaacgacgatggtgagtgacaaaccgcttgtgctggaaatatttggtgtttttctttttgcagatatcatttaa tttgcctgtttgttgtttaggtgatggcattcccgacaagtcttcccatggtagacttagaaagagaaaggccaatcaga cttttatgatcaaagagtaagctaaactactgtcgatagttttttgagattacgaatgtccattctgttattannnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnncctcgcctctcaagacaatcgacgatggcagggttcttttcgcttcgaataactttctatttattgtactgta tagagaggactccgatgatgacgatattgaaaaaggagacaacaagattcccaggtaattcaatttccatctcctgaatt caccaccggcgaattgtaaaaaaacttgtggtgaatcgtaatagaaatatgacgacgaggctggtgttacgtttggaagt tttacaataggcgtacatttcatctcgtgtgattcgtttgaaaagtgacatgaatacttttctgtcatagatttgttttc ttgaaggtaaatatttttgatgtgaatgacaatgcatttgtgtactttgacttaaattgtctctcgaccgtgtaactaaa gtaaactattgttgtgccctgttttttgcttattttagcaatcgttctgataatgtggaagctgtgtttcctatgagtag gaccggaggtcatgtcacttcattttaacaaagtgggttcttttatctttttgtcagaacatccgatgaaaataacaagg agaaatttgcaaggtacgtgttgaatagtaataatgcactttttgtagtgtcaatttttaaatcacgttcaaccttgaac gtctacgctccagtcgtaaagtactttgtgaagttattttcatacctgtccgttcatatgcatggcatttatatttaaca tcgccaaaaattgccactgtcttggagacagttatttttaaatggattttacgtctgacggaagctattgtgaagggtat acccttccagctgttattttaagaaacaacgttttgagttttgacccttgtttgatgacacacagctgggattgtgtatg aaagaacacattttgctatgccaactaatgtacattaatcgtaatggtttatgaacttctggaatcgttttggccaccca atgttaaattgaattagcctcagctctgtttttccagttttttttttgctgaaaaaaaaaagtgcaatgttttgcttaag tatataccacacaagcgagtagtgcttttggcacatgttggccagctcggaggtgattatatacaagtatcttcacctct gggcatggagcagtgcgcaaacctctaaaaatcaatcatttttcagtttattatcacagataaagtagtttttggcactc tcttttgagcttgtatggtatgtactaaaacaataataataaattattcacctccatatcggtgaaagtggcgaatcatt gttaaatagtgtagcacttatcatgaaaacctctttgttgacctcaaggtttagccaacgtaaacattggtgtctacacc acattttttttactgtaaccaatattgtgtggaatcaggtgtgcaagttatctgaaagaacatctgaagaaggttgccat gcaatgtcttaaatttttctcattaaatggtccatctgaaaaaagggaaaaaaactgttttactttatttttgtgttcat ggattgaggagtgtttcaacttgggctccaatttataagccttcaactaacttagaaactgatgttttgtttgtggtagc ttacattatccagaatacaaataaattttaaaggtttatgtttgtgctttaccttggcagttttaatgaattatgctgga gttggtttatctctttattcatttttaaacactgactttgactcttgtgtttagacctttttacacatagtttgagtctt caatttcaaattgtggcctaaatgccagtgtccctgatattctttgtaagctggttgactgcagcgttttctttaagttt ttaagtagccggagctttgtgaaaagtagacggttgcgggtccatctccccgatatatcttgacttgtgaagcaatgaaa gtagcaggcgaaacctgacagagaagcaggcccttatatatgaccttgtgacggtgcttgtacctctgaactcatttgca ttgcacataagctgtacagacatatttgaattaactagacacgattgcaaagcttcttttactgatcttccttcctagct tgttgttttttttgcagtgaaaattgaataacattgttgcttttacagggagaatcacagtgagattgaaagaagaagac gaaacaagatgaatgcttatattaatgagctatctgacatggtgccatcttgcaatggcttagctcgtaaacctgataaa ctcactgtgctgagaatggcagttaactacatgaaatcactgagaggccccggtacttagtcgctaatttataatccaaa gcttttttctctgtgggctactttttactcctgtggacaagtctcttgagatctgagaatcgctagaatttactcgcatt acattggagtaattagtgcatgctttggtgtctttttttagctaggctttttgtcagtgtttgcaacttagaggagcaca ataatgattaggaggacacgttgtgcatttctcgccaaatatgatgatgaagttaacgagaaggggatgaggggacactt tgtggtggttatttgaaatcggcatgcatcttctgtaattacgtgcagttatggacacacctcaactattggccgtcgct tgtgagtctttcctggccatagcacttcacttgaagatgaatcaatgtatgggttggttgtggattaatataagctaccc tcttccactcctgaccttagaaacttcaggaattatccctggagttatgaccctcttccactcctgaccttagaaactac aggaattatccctggagttatgactcttgttaataagaatgggtctaatctgactgggtgtttactttgttttggtgttt cttgtcttttgtgctaattttaggccttactcctgatgtttcgcacaaaccttcatttttgtctgatcaagaactcaagc atcttatcttggaggtaagcgtacgagctgaaattgagaaatttttggttttcactggggtgattagttgtcatttcatt taaccaaaacaaaagaacatggctccagtttctttgtctaatacagagagggcaaaattactgaatgctaattggtcaat gaagagagtattttttctaaattttgcttcgtgaagagggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnngtgggcgaatgaaagaaacttgcaagcaaatttagaagagtaggagaacaatgtcctcgaccaacg attgtcgcagtttcagttaagcattcagaaattcagtaattatgccctctatgttattaacaatcgcaatggatctcgta aaattaaggattaatatctcttgtgttttcagaagttgctgaaattgcccttgttgctgcgcgacttgggcagtttcagc aacttctgaaaatacttgtgatattaatccttaattttacttagccccatgtgattacctatacaaaatgagatcaaaaa ggccactcacagaaaaaccaaggatcgctattttgacaatgttaataatattattattgtcattttgtctcaaacatttt caacttaaagctaaactatattttaaaccaaaaatttcattttattgttctttattgttcaggctgcagatggttttctg tttgtggttaattgtaccactggaattgtagtgtatgtttcagactccataactccggtcctaaatcagccacaggtgag tgtgtgacatcattcttcatcatttccatgcctgtgggactttgtttaacagtgttccagatcagagacttgttacttcc atctcaaagctgacaaaatttggctctataggacccaacaaatttaatgatgcatgttacctgtatgagagtgtgtagaa acccacttttacagaccccaacttggcctcttcagagtccttgacagctctatgctttgaaatctctctaggaacactcc tttcatcagtaaaaaaattcaactgaatattcctttgataattgacttctataatcttttagagtgcgtggatgaatcaa gagatatttgacttggtgcatcccgaagacactgataaaatacgagatcaactttctgctactgaatcaccagatgcagg gagagtattggatctaaaaagtgagttacaatgtgccaattagtgtaattttccgccctttacccccggattagctgtta attttttattacacacatgctgctgcaggtaatccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccttgccttgtggcttgggctaa aatgagtctgagtcaggcccaataatattattatttatgctggcaacattaactgtttaatttcacccttaacccctcag tgtctgaggggttccccattgacaagtaaaatcgtttggcgttagacagtgtaaaatctataagtgtcatgagtgcgctt acggacactgagggattaaaggtaataattattataacagtgaaaatgtctcattactttcttcataggtggaagtgtga agaaagacagccacggaggtaacagagttcaatattatagttttcaacttcattttgtacaaaattacttttgatatttc tccacaagtactgaatttacagggtcctgtttgctctttagccttgtcaaggatgtactctagctcaagaagaaacttta tctgtcgtatgagatgtggaaaagaagaaaacgacctcctgccaagaggaaagggcaaccgattgaagcttttggatgat gagtatgcaatcgtccactgtactggatacatcaaggtactgtcttgcagtgttctccttatcaggtggtaactggtaaa atttactgtctcaagcaacagtaacagtctgatcttactgcctgcaaccacttgatggtttacttaaactatataagttg ttttagtaaaataccggtcaggaa |
Protein
Protein ID | aug_v2a.08869.t1 |
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Definition | - |
>aug_v2a.08869.t1 MDDFNDDGDGIPDKSSHGRLRKRKANQTFMIKEEDSDDDDIEKGDNKIPRTSDENNKEKFARENHSEIERRRRNKMNAYI NELSDMVPSCNGLARKPDKLTVLRMAVNYMKSLRGPGLTPDVSHKPSFLSDQELKHLILEAADGFLFVVNCTTGIVVYVS DSITPVLNQPQSAWMNQEIFDLVHPEDTDKIRDQLSATESPDAGRVLDLKSGSVKKDSHGALSRMYSSSRRNFICRMRCG KEENDLLPRGKGNRLKLLDDEYAIVHCTGYIKVLSCSVLLIRW* |