Gene
Gene Model ID | aug_v2a.09205 |
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Locus | scaf3526 : 56056 ... 60346 : + |
To GenomeBrowser | scaf3526:56056..60346 |
Genes list of scaffold | scaf3526 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-HSP40-1 |
Description | Named thus because a bi-directional best hit results was obtained by BLASTP searches. See Ciona intestinalis HSP40 (BAB85846). Axoneme related protein. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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dnaj homolog subfamily b member 13-like | GO:0006457 GO:0051082 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09205.t1 | gi|156377207|ref|XP_001630748.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.09205.t1 | gi|449662334|ref|XP_002155237.2| | PREDICTED: dnaJ homolog subfamily B member 13-like [Hydra vulgaris] | 0.0 |
aug_v2a.09205.t1 | gi|74096171|ref|NP_001027731.1| | heat shock protein 40 [Ciona intestinalis] | 0.0 |
aug_v2a.09205.t1 | gi|530396754|ref|XP_005274041.1| | PREDICTED: dnaJ homolog subfamily B member 13 isoform X3 [Homo sapiens] | 0.0 |
aug_v2a.09205.t1 | gi|148684508|gb|EDL16455.1| | DnaJ (Hsp40) related, subfamily B, member 13, isoform CRA_c [Mus musculus] | 0.0 |
Transcript
Transcript ID | aug_v2a.09205.t1 |
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Definition | - |
>aug_v2a.09205.t1 ttagtgccagttttcactgtgaactcttcctactcggtatcgttggcatggcaacaagataaaccgacgatcgccatttt tgacagagtatattgaaaagatgggacaagattattacgcagttttgggcctcacgaaaagtgccaatgatgcagatatc aaaaaagcgtaagacgagtattgaatacattacgcaaaggtatcgattcaaacaacaggtctcatgattgttcgaaatct tctttcacagttatcgtaagttgtccttgaaatttcaccctgacaaaaaccaagaaccgggagcagatttgagattcaaa caagtcgcagaagcatatgatatactaagtgatcgtaagtattaacgaattggaagacaacttagtgaattatcataaaa tgcatgcccttaaagtgggtttcgtttagcaatcgaagtttggtttaacgagatatgaaaattatacattggcttccttg caacgtattttggtttttattcgatacttaaaagaaaaactgaacaattaaggtagaagagagctactagcaaaaacatc ctgccattttctgttcactttattattttgtgtattatttatagttctgggccaagttattaaattgagttgcataacca acttagtacttaattgttcttttattttgcgcctttgcagccaaaaagagagcaatttatgaccaatttggtgaagaagg actgaaaggaggagttccagaaaaaggtagccacttatcgttaaataatcatgcaaaacaggagaattgacatcgtttaa aaaattttatagtgaatggcctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnngatccagaagttggatttggtgggattcatggacggggacgacgaaagcaagatccccc aattgaacgagaactttatctaaccctggaggaggtgtttaaaggatgtgtgaagaaaatgaaaatttcaagaagggtaa gaatggatgttaaactatttctaatcttttgtgagttttcaaacaccgtaaagtgttaagaacccataaatgagaaggtc tatggacgcatgctacttactaacttttgagagaaatctcaaattctgacaaatgatgttgaaaaccttttagaggggaa tgtaatgtatatgtacatactataatgtgaaaaaaaaacacagttttgtaatgtttgcgttaattgttgcatttgcaggt catgaatgaagatgggcacacatcaagcatacgtgacaagattttaaccatcaatgtcaaacagggatggagagctggaa caaaaattactttcccaaaggagggtgatcagggtcccaataatatcccaggtacttatgttctgtaaatgtttgagcca cagtccagcaatcacattgacagagagttgttaccattagtcagaactggtgggctgtgtctgccagtcttcagatggaa cgtgtctgttctgctgagagccgctttgggaaggatgaacagtttggttgtaaatttcacagctctctcaccttgccaga gctgatgtattatttttggtctgacaaatggtaaggcaccctaagaaaaaggctgtgcacacaataagttattaatttgt gcaaaaatacagtgctgttggattatagatagtaatgaacttgcaggtcgtatcagctcaaccgcaaatgaaatgcctca gttcaaagctccttaaaagaacttgttgatgaagttgcttgatcactttcactctctcatcctatgggaaccaatgaatg ggaatatggaggataacttccaggcaaactgacatgctaatttgcaacagatggcttgacaaagtccaagcaatacagtg ttgatgggcatcaatggatgggagttacacattatgtctggtcaagctggagctttccttgaaaaatttaccattggctg ggcagatcagcccatccacaaacaaaatgtgtcagttgtgagaactgagacaagggttcttggtaccagtgcttccagaa cagtttggacaggaaaaggtttgtcagttctcattactgacaaattccttttgtgtagtggccaatcctgtagaccagtt ctgactattgaatgatgatgattagatacggtaataccaagggggttaagggttgaatctgcaaatgcagttaacttgta agttgtgcattattcttgtggctaatatttttttgtcttctacttagccgacattgtgtttatcgtgaaagacaaacctc acccagtcttcaagcgagacaatgacaacctcatttatactgcttctgttcccctaggcaaggtaagtttggtagttccc aacgaattttatctacatatagttgcattcctgaaaattttgtctgagatttgctggagccagggggatttacttcaacc tttctaaaacatgaaatattacaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgtcctctcagtcataaaa atttagcagaatgtgattttcaagtgtatagactgtcaaaaacttattattactgtgacacttaaattaacatttgaatt attttccttgctcaggcactcactggctgtgttgtggatgttcccactctggatggacgacttattagcattcccattaa tgacatcgtcaagtaagtacttgtacaagtacctactgtaacattgtttcttttattttatgtattgattcattacttca aagactcgttcaaggtattggaaacaatattatacaacatttttaagtaaatcgcagcttaatgttgctcacaggactca attgcttgaaacatggatatgcccaactatgtttgatcggtatgaaaaactacagttgtcaaggtgtttaacacactacc catgcttctagcaagtaagaatatatatgtaaaaatccagtgacacttaagagtttggaaagtatggttttggtttctgt gccaaatagaccaatatctattactacttcatgatcagtctgtaggacattgctcaaattgttcatgtcaaaacttttca gcggcctactagatgtagatggtaatattttgccttgtttcaatagacctggatatcaaaagatagtccccagtgagggc atgcccatctccaaagacccaaacacaaaagggaacctgattattcaattcaacattgagttcccttctcaactcaaccc tgagcagaagagattgctgaaagaggcactcctttatcctgcattgtgaagctccagcaagagttactgatcgccatcat ggaaacaccatgcgtgaacagaaataatttaaataatcgttggttgaaaag |
Protein
Protein ID | aug_v2a.09205.t1 |
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Definition | - |
>aug_v2a.09205.t1 MGQDYYAVLGLTKSANDADIKKAYRKLSLKFHPDKNQEPGADLRFKQVAEAYDILSDQVGFGGIHGRGRRKQDPPIEREL YLTLEEVFKGCVKKMKISRRVMNEDGHTSSIRDKILTINVKQGWRAGTKITFPKEGDQGPNNIPADIVFIVKDKPHPVFK RDNDNLIYTASVPLGKALTGCVVDVPTLDGRLISIPINDIVKPGYQKIVPSEGMPISKDPNTKGNLIIQFNIEFPSQLNP EQKRLLKEALLYPAL* |