Gene
Gene Model ID | aug_v2a.09705 |
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Locus | scaf3717 : 2106 ... 6622 : + |
To GenomeBrowser | scaf3717:2106..6622 |
Genes list of scaffold | scaf3717 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 41-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 41-1. This gene model contains RVT_1 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.09705.t1 |
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Definition | - |
>aug_v2a.09705.t1 atggtgtcagaaagtggttcgaattctcgccttcatttggttaacaacgtcgtttgaacgtcaaccctggtcaacagcga gtctagtaagcgattgaagcatgctcgccgatccaccgacggagggagaacacccagtacaagctgttcaagcaccgata tttaccagtaacgtcccggttcctccaaaaattgaatcatctggaaaccttgctaacaattggaagcagtggaagcaggt ttggagtgcttacgaattagtcacgcgtctcaatgagcagactgacgaatatcgagtggctgcatttatcacatgtattg gtccaaaagcgctcactatacacaatggccttccgttccagagcgaggccgagaagaagaatttatcgaaaattctagaa ttatgggaatcctattgcctcggtaagacgaacatcatatatgaaagatatcgcttcaataaccgtgatcaagaaaccgg tgaatcaatcaacacttacgcatcaaatttgagatctctctctgatacgtgcaactttggagcgcttaaagacgaaatga taagagacaggattgtctgcggagttcgtgacagcagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnttcggctagaaacggctcagaacatgaagctactggctgtgcaaactcagaacat tttattcgttagagaagatacatcgtcctgtgatgctcaggagcctaagttcacaagagatgcagtgatgagtgaatatt cagacgtttttggagaagagttgggccgcatggaagggaaagtacaccttgaaacagaccctaatgttgctcccacagtt atgccgccacgtcgtgtacctgttgcgcttaaagagagactgaagaatgaacttgatcggttaactcagaggaaagtgat cagccctattcaagaacctacagactgggtttcaagtatgattgcaaccaagaagccagacgggaacattcgtttgtgca ttgatccccatcacttaaatcgagccttaaaacgaagccattaccctctcccggtcatagaagagatcctgccagaactc tcaaaggccaaggtattcaccaaagttgatttgaaagaaggctttcttcaagttgagttagaggaagaatccagtaagct aactgtctttcagacaccttgggggcggtatcgctttcacagaatgccgtttggaatcaccccagctccggaaatatttc agatgaaacttgaccaaaaacttggaaggactgaaaggagtcttcaaaattgctgatgatatactcatcactggtcaagg agaaatagagcgagaggcagatgaagatcacgacagaaaccttaagtccctcctagatcgatgcagggagcggaatatca aacttaacaagaagaagtttacgttcaaatgcgatgatgtgcaattcattggccaccgcctaacaaaagaaggtctaaag cctgatcctgctaaactgagagcaattctgaatatgaagaaacctgatgatgtagctgcagtgcaaaggctgatgggtat ggtcaagtacctctcaaaattcctttgtgacctatctcagatttgtgaacctatccgccgtctaatacataaagatgtac cctggttatggacaaaagaacaggatgttgcctttaacaagatcaaggaagcagttacctctgccccagtcctcaagtac tttgattctagcaagcctacagaaggaagtggagatgcttcttcacaaggacttggttttgtactcacacaggaagacca ccctgtcacttacgcaagccgagctctgacacaggctgagcagcgctactcacaaattgaaaaggagctcttggctcaag tctttggtttagaacacaaccaccagtacgtttatggcagaaaagttattctttatacagatcacaagcccttggtgtcc atctcaagtaagccgttagcatctgcacctaaacgtctacaaagacttctcctccgtttacagcagtacgatgcagaaat cagatataggcctggaagagagatgtatctcgccgataccctatcaagagcctatctaagcctaagtccgactgacacac tgagatcagagactgagaaggaagtagaaagtattcatgccgtagactatctagctatctccgagcagcagcttagcgaa atcaagcaagaaacagctaaagatccaactcttctgacccttaaaaatgtgatcttaaggggatggcctgaaaacagcag ctcagtaccaaaggaagtctcccagtacttcagtgtcagagacgaacttgccgtacaagacggaatcatctttaaaggcc aaagatgtgttatccctaagaccttgagacagaaagttaaagagaagatccaccgtgctcacatcggaatacaaggttgc ttaagaagagcatgtgaggtcatttactggccttccatgaatcaagaaatcactgactacattgaacactgtgatacatg taacatgtatgcttaccaccctcagcgagagcctctcatagtacatgatgtgcctgaacgcctgtggcagaaagtgggtt gtgacatattcaccttagatgaaaaggcttttctatgtactgtagactattattctggctattttgaagttgaccatctt gagaggaagactgcaagatccattatcaccagattgaaacgacacttctccaatcatggtatacctaacctgtttcagag cgacaatggtccgccctttgactctcacgagtttagagatttcgcagcagcttatgagttcgaggtagtcaccagttctc ctaactatcctcaaagtaacggccgcgtagaaaacgctgttaaaacagcaaagcagctaatgaagaaatccaggcaagct ggaaccgatttttatttagcattgctggactggagaaataccccgacggagggcgtaggctgttcacctgtgcaaagact ttgtggccgaaggacaagaacacttctcccaacagcaacaagtcttttgaaacctgcgacaacccctggtgtgcgagaaa aacttcataagaagaaagagcgtcagacctattactacaacagaggaactcgagagctgtcgcccttacgcaaaggtgat gctgttgtaatgctacctagtccccaatctcgaaagtggaagaaagctcaagttgaagatcaagtggatgtgcgatcata cgcagtacgcactgaagacggtagagtttttcggagaaaccaaagacacctaaagaagtacgatccacctccagctacac acactctggaagtcgtggttggtccttcgaagattacggttacagcagaaggagcggtaaaggactctgaggagcctccc atacaaccaccccaacaagtgtcagcagatgtctctactccaccttcgagtccaatagtaccagcaccagcacctgtgga agacccacctgtacgagtagcggcagcgtctaggggctcgagcagacgtcagattaagtttccaggtcgtttcaaggact ttatgatgacctagctgcgctaggcagagacactctgaacgtttcgttatgttctattgtaattcaggaactttcaactt ttgcccatttcactgccatttattgggctcatagttttcttattacttcgttgtgtttattacttacagggacattccta agaacattactcatatctttattgtagaataagtttccttttttaatttttcttttctttacaaaaggaagggtgtaacg tcacgtgatagatttcaaccaatgacatgccagtctgagcatgtgctcgtcgttgttttgtattgagagccgtcactgaa ccgacacaaggagttccaataaagttggtttatgttc |
Protein
Protein ID | aug_v2a.09705.t1 |
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Definition | - |
>aug_v2a.09705.t1 MLADPPTEGEHPVQAVQAPIFTSNVPVPPKIESSGNLANNWKQWKQVWSAYELVTRLNEQTDEYRVAAFITCIGPKALTI HNGLPFQSEAEKKNLSKILELWESYCLETAQNMKLLAVQTQNILFVREDTSSCDAQEPKFTRDAVMSEYSDVFGEELGRM EGKVHLETDPNVAPTVMPPRRVPVALKERLKNELDRLTQRKVISPIQEPTDWVSSMIATKKPDGNIRLCIDPHHLNRALK RSHYPLPVIEEILPELSKAKVFTKVDLKEGFLQVELEEESREIEREADEDHDRNLKSLLDRCRERNIKLNKKKFTFKCDD VQFIGHRLTKEGLKPDPAKLRAILNMKKPDDVAAVQRLMGMVKYLSKFLCDLSQICEPIRRLIHKDVPWLWTKEQDVAFN KIKEAVTSAPVLKYFDSSKPTEGSGDASSQGLGFVLTQEDHPVTYASRALTQAEQRYSQIEKELLAQVFGLEHNHQYVYG RKVILYTDHKPLVSISSKPLASAPKRLQRLLLRLQQYDAEIRYRPGREMYLADTLSRAYLSLSPTDTLRSETEKEVESIH AVDYLAISEQQLSEIKQETAKDPTLLTLKNVILRGWPENSSSVPKEVSQYFSVRDELAVQDGIIFKGQRCVIPKTLRQKV KEKIHRAHIGIQGCLRRACEVIYWPSMNQEITDYIEHCDTCNMYAYHPQREPLIVHDVPERLWQKVGCDIFTLDEKAFLC TVDYYSGYFEVDHLERKTARSIITRLKRHFSNHGIPNLFQSDNGPPFDSHEFRDFAAAYEFEVVTSSPNYPQSNGRVENA VKTAKQLMKKSRQAGTDFYLALLDWRNTPTEGVGCSPVQRLCGRRTRTLLPTATSLLKPATTPGVREKLHKKKERQTYYY NRGTRELSPLRKGDAVVMLPSPQSRKWKKAQVEDQVDVRSYAVRTEDGRVFRRNQRHLKKYDPPPATHTLEVVVGPSKIT VTAEGAVKDSEEPPIQPPQQVSADVSTPPSSPIVPAPAPVEDPPVRVAAASRGSSRRQIKFPGRFKDFMMT* |