Gene
Gene Model ID | aug_v2a.09738 |
---|---|
Locus | scaf3729 : 72067 ... 76165 : - |
To GenomeBrowser | scaf3729:72067..76165 |
Genes list of scaffold | scaf3729 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.09738.t1 | gi|339258870|ref|XP_003369621.1| | putative integrase core domain protein [Trichinella spiralis] | 0.0 |
aug_v2a.09738.t1 | gi|339238979|ref|XP_003381044.1| | zinc knuckle protein [Trichinella spiralis] | 0.0 |
Transcript
Transcript ID | aug_v2a.09738.t1 |
---|---|
Definition | - |
>aug_v2a.09738.t1 taaacatgttcctgaagtgaaattggcgggaagcaatccagccgtatcccagtcgccttctcaagtgcaagttaagctac ccaagatcaatctaccaaccttggatggaaatgttttgagttggcaaccgtattatcagtcgttaaaagtttcggtagag gacaatccgtcattggcagatgtccaaaaattagagtattcgatgagatcgctaaagggttcggctgctgaagcggtgaa aggttttgcagtggtacaagcgaattacaagccagttttggaaatcctaaaggaaagattcgggcatacaagattaatac ttgatgcgcatgggagatccttcacccatttgccatgtttgaactctgatgatgcaacctccatgcgtaaattttacgat gaagtgataggtcacgttcgttatgttgagtgcatggctgaaaagtttaattctgaaactttggctcctgttcttgtgcc tcttataggtgacaagctgccaaaagtagttgtggaaaaatgggaactagagcttaatgaggagaaagctaaacaggact gcgtggaagtgaaaacactgctcactttcttggaacattcgaaaagagctaaagagtcttcacagcctccttctcttgat ttgaaagctccggcaagggaaaatcctggaaatcgtgaaaaccgtttcaagtttaaccggtcacaaagtcttccacctca gcattatgtgcgacaacgcaaaagacaatgtgtgtcatttgctacaaaaaccatggtttgaagtcatgtgtcaattttct gtcattgcctgtaaaagaaagattcagaaaagcaacgtctaaaggcctgtgtttccgatgccctgaatctggtcatagag ctgaagtgtgccaaaaccctccatgcaagtattgtcaaggtagacatgacagtctcctgcatcaagattcagctcgttct cacttggaagaagtcaaggtggaatcggtccctgaactaccatcctcgtcgtcacgtcctcctgtgtcatcttcagtcat ggcaaattttgttgcagtgagttcagttggaaaggtgattctgcagactgtacaagctattttgtgtggatctaatgggt gttcaaaagttgtgagatgcttctttgatcctggttctcaaacatcgtttgttcggcagagtgtaattgatgagctgggt cttgatgggaagagtgtcaaaattgcagtttctggatttggtggagaggccaccaagagcactttgcggaagagaattgt gtttactgtggaacctgttgacaaatctgaacagcctcaatgtattaaggcacttactacaccagtgatatgccggccag ctgaaactgtggacattcaaccaatgaagtggtctcatcttcgaaacatagcatttcctgaaaaattcccaagagaggaa aaggagattgatgtgcttattggcttggatttctattattcctttgtgacaagagacgtcgtgagagggggttccagtga gccagttgcagttcgcacaactttgggttgggtcttctgtggtccaagaggtggtcatgaccaagaatgtacggtatcta tgaatgtccaagttgctgttgaggaacaattgaatgaaacacttcaaatgttttgggatttggagtccattggtattaga cctgctgaaagttcaatttctactacaaacgctgaagatgtgatcttgaagaagtttaaagagacactaacctaccacga tggtcgctatgaagtagccttaccatggaaggaagatcacctcacactgaaagataattaccagcaagcagaaagaaggt tgcacaatctggaaaagaagctgctccatgagccgaggaaagctgcatcgtatagagaagcaataaacaagtatgttgag aatggtgttgctgaagaagtaccttctgatgaagttacaccaacagatgggcgtcctgtgttctatcttcctcatcatgc gattatcagggaagacaagcagacaaccaagacaagaattgtgttcgatgcatcagcaaaggatagcaatggtgtctcct tgaacagctgcttagagccaggcccagcattacagccagctttggttggaattcttctgcgttttcgtaagaattatgtt ggtatcatgggtgacatagagaagatgttcttgcagattcgattgacagaagaagacagagattcacatcgttatctgtg gagagactcagaccccaaggccaagcctaagatttacagaatgacaagggtcacatttggagttgtttccaatccatttc ttgcaactgggacaattcaagagcacgtgaaaatgtgtaaaaaaacattccctgttgcatcgagtgaaattttgaggaac acctatgttgatgactttgcctcagggggagacaatgtgcaggaaacactgaaattacagcaaagtgctactgagcttat gcagaatgctgcctttaatttgacaaagtggtcaaggaattcgtctgagcttttggatgccatacccgagaaggacagag cagcggttggtcttgtcaaccggaaaggtgatccagcggaagcccatccaatcacaaaagcattaggattaaagtggaat acagtaactgacaaccttgtctttggaattgatgtgggcattgttaagtcgagatcagagtcagtgtacactaaaaaaga agtggcgtctttggcagcaatgatatttgatccgattgatctaattgcacccttttcagtgagatcagaattaattcttc aaagtttgtggtctaagggtgttggatggaatgaagaaattcccatggaagtctcattgaaatggaatcagtgggttcaa gagctttcagaacttgaacaccttcacattccaagatgttttagtcgttttccattaaatcagaattgtatagtggaact acacgcatttggtgatgcgtcagaacttggttatgcctctgccatttatctgagatttgttcatgaagaaggaaaggtat ctaccagtcttgtaatatccaagaccccagtggctcctgtaaggaagattacccttcggcgcttagagttaatggctgct gtaattaccgctaggatttgttcctatgtcaaaggtgcaattgattgtcccattaatcgcattgtttgttggacagacaa ttcttcaaccttacactggatcagaggagcggcctctcaatggaaaccattcgttgctaatcgtgtcattgaaatttaat cattgttggatcccagtgtttggcggtattgtccgggaccgcagaatccagctgatctacctactcgaggtttatctgca agtctgttaagagagagtcatttgtggtggagaggacccatttggttgcaagagtccgagaaagattggccggaggattt aaggtcaaaaccttccagtgaaattgttgatccagagagaaagagtaaagctagtgttagttgtgttgtgcagctcaaac agccattacttgacttctcaaggttcagcaagtatagtcgcttgctcagaactgttgcttggatcagaagattcgttagc aactcaagagtgaaagaagaggaaagatttgacagccctttaactggtttggaaatacaaaatgcagaagaatggttgat atctcctgtgcaagaagcaagcttttctgaagaagttacctcaggtaaacagcatgatccagtgaaagacagcaacctgg ccaatttaaacccgtttatgtgtcctactagtcattgtcttcgtgttggaggaagaattcacaagtcactgttaccagag gaggagaagcatcctattatcttgccttctaaacatcctgttgttaagttgttgattgaggacgttcaccgccgtgagct acatgctggagctgaacaaactttgtcagttttggttgatcaaaggacggtcgactgtccgtcagacgctaaggaactgt ctaatttgtcgccattaccaaacaaagccatttggtcagcagatggcaccacttcctgaagacagaattaagcctgcacc accgttcactaacgtgggt |
Protein
Protein ID | aug_v2a.09738.t1 |
---|---|
Definition | - |
>aug_v2a.09738.t1 MRSLKGSAAEAVKGFAVVQANYKPVLEILKERFGHTRLILDAHGRSFTHLPCLNSDDATSMRKFYDEVIGHVRYVECMAE KFNSETLAPVLVPLIERFRKATSKGLCFRCPESGHRAEVCQNPPCKYCQGRHDSLLHQDSARSHLEEVKVESVPELPSSS SRPPVSSSVMANFVAVSSVGKVILQTVQAILCGSNGCSKVVRCFFDPGSQTSFVRQSVIDELGLDGKSVKIAVSGFGGEA TKSTLRKRIVFTVEPVDKSEQPQCIKALTTPVICRPAETVDIQPMKWSHLRNIAFPEKFPREEKEIDVLIGLDFYYSFVT RDVVRGGSSEPVAVRTTLGWVFCGPRGGHDQECTVSMNVQVAVEEQLNETLQMFWDLESIGIRPAESSISTTNAEDVILK KFKETLTYHDGRYEVALPWKEDHLTLKDNYQQAERRLHNLEKKLLHEPRKAASYREAINKYVENGVAEEVPSDEVTPTDG RPVFYLPHHAIIREDKQTTKTRIVFDASAKDSNGVSLNSCLEPGPALQPALVGILLRFRKNYVGIMGDIEKMFLQIRLTE EDRDSHRYLWRDSDPKAKPKIYRMTRVTFGVVSNPFLATGTIQEHVKMCKKTFPVASSEILRNTYVDDFASGGDNVQETL KLQQSATELMQNAAFNLTKWSRNSSELLDAIPEKDRAAVGLVNRKGDPAEAHPITKALGLKWNTVTDNLVFGIDVGIVKS RSESVYTKKEVASLAAMIFDPIDLIAPFSVRSELILQSLWSKGVGWNEEIPMEVSLKWNQWVQELSELEHLHIPRCFSRF PLNQNCIVELHAFGDASELGYASAIYLRFVHEEGKVSTSLVISKTPVAPNPADLPTRGLSASLLRESHLWWRGPIWLQES EKDWPEDLRSKPSSEIVDPERKSKASVSCVVQLKQPLLDFSRFSKYSRLLRTVAWIRRFVSNSRVKEEERFDSPLTGLEI QNAEEWLISPVQEASFSEEVTSGKQHDPVKDSNLANLNPFMCPTSHCLRVGGRIHKSLLPEEEKHPIILPSKHPVVKLLI EDVHRRELHAGAEQTLSVLVDQRTVDCPSDAKELSNLSPLPNKAIWSADGTTS* |