Gene
Gene Model ID | aug_v2a.10192 |
---|---|
Locus | scaf3908 : 24529 ... 36715 : - |
To GenomeBrowser | scaf3908:24529..36715 |
Genes list of scaffold | scaf3908 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
histidine--trna cytoplasmic isoform x3 | GO:0004821 GO:0005524 GO:0005737 GO:0006427 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.10192.t1 | gi|557014232|ref|XP_006007630.1| | PREDICTED: histidine--tRNA ligase, cytoplasmic-like [Latimeria chalumnae] | 0.0 |
aug_v2a.10192.t1 | gi|505829385|ref|XP_004609995.1| | PREDICTED: histidine--tRNA ligase, cytoplasmic isoform X3 [Sorex araneus] | 0.0 |
aug_v2a.10192.t1 | gi|532026110|ref|XP_005356040.1| | PREDICTED: histidine--tRNA ligase, cytoplasmic isoform X3 [Microtus ochrogaster] | 0.0 |
aug_v2a.10192.t1 | gi|602699039|ref|XP_007461538.1| | PREDICTED: histidine--tRNA ligase, cytoplasmic isoform X3 [Lipotes vexillifer] | 0.0 |
aug_v2a.10192.t1 | gi|585158504|ref|XP_006731533.1| | PREDICTED: histidine--tRNA ligase, cytoplasmic isoform X4 [Leptonychotes weddellii] | 0.0 |
Transcript
Transcript ID | aug_v2a.10192.t1 |
---|---|
Definition | - |
>aug_v2a.10192.t1 gaccgaaagtaaatatggcatccaaagctccatccccgttgaggagtgaaattcaacaagagattaaaatacaaggagag ataatcagacaattaaagctcgaagaacagacagatgaagttaaagataaggtaagtttttttggttttccttacagtgt cctttggatttcgtcaataaagccggtttgtaagaacacgtgggcgttaaaacatagctttttgttcgacaatttttgca agggcgctttgttctacttgtaattaccgaaataaaatcatttcttccttactttaagtgtcagaagtgttcagtagtga ctgttggtttttatttccagacattatgatgtcctccaaattgataaggaatatttttactgttcctaaattgttgcggg ttgctcaactgtcgtgttcacactgtctagaaacagaggtcagtgggagtgttatgctctacagtcagtgtttggattta agataactgtatgttgtgggtcccaactaaattcaggttaaaatgataattacttcaacccacacgtacggtagtttttg ataatttctcaagtgaaaatcgctttgagtccggaaacatatcagttttctccagaagagataaaacaaacgtaaggttg agacaaattggaccttgtttgattctacttgtttgattttttctgtgcaattttgaaatacctttcaccaacattacctg gcctctctttccaaagactatagatggagtccaaaactgatgtttcaaaaccttatgccaaggttattttcagactttct cccctcattatttcttattttctcttcgatccaactcttgttacacacaacaactgaatgtcttgttctatatttgtgtt attcaattcttcagtttgggaggaaacctaaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnncaagcgcatgcgcatttaagatgtaatcatggtcaccatggatggaaagatggtaacaaag caagacaattttgtgtgtggcttattctcagggctaatttttctttcagagaaataactttattcccacccaagatttgt ttacgagtaatcctgttcgatgtagctcagtattcgttgaaaatcggcatgacgcattcgcatcatgtctttatattccg ccgtgtcttcgatcgccaattccttcacgatattgttgaaatatcctctttcatcccttcttctgatccattgccttgtc tttcccctcccgcattttttatcctaatgattcaaaacttcgaaagctacaaaaactgctaataacgagcgaactttttt gtaaacatacgcgcgagccattgtcatttcaaaatgacgcccttgcatgtctcaggcgtgaaaagagcctgggcctgaaa caaattaccaggcccctcgctaaattttgttgaatgaaatgttgaaaccgtttgctcatcccaccgttcaacatcattca acaaccttccaacagcgttcaacaaaattgaatggatgttgaagcaatgttgaagccgtttgctagggcctttatcttaa aacttaagccattaaatgtaaatctattgcaatgtggcaaaatgtaataaaataaaaacagctctaaagacagctgagtg cagacaactgcacattcatcctgactttgtcatttctatagccatggaaaatgtccaattacctggaaatgtgcttgcat gaggggatctttaagtctcaagtgatctctgacggcatttctccttcaattccatagagacaggaaaagttacattttta gaagtcaaatattctcatttcctgttatgattgcagttgaaagaagaaatagcaaaattaattgagcttaaaaagcaact tggagatgaccaagggaatcaaaagtttgttctcaaaaccccaaaggtaactttcaaagttcagggacagtattgnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcacagtattggatgcagaagtc agaattattattgtttgtttgcaacttccagtaattgtttttacaaagaatacagtggaatattacaannnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagaattaactgtaaaatcctggacctttatgacactaactac cgtacttattcggctataagccgagcgatttttacacaaatcaacactcaatttgggcaaatttgaagccgcagaagggg tctcggcttatttgataaaaaaattcttatcaaattaaaacagtaacaaatgacatgtattcacttacaagctaagctaa atagagaagcaatcaacacttatacttaaagactgcggccgaggacccctagaatttaaaagacgcatttgttcctccag tacagcgtcagcttaaggtacttcgctggttctgcttgttgaggggcttccaacacttcgagagccaaacaatgacctgc tgtcactctctttgtcttctttacaaagttcacacaatcgaattcgatctccaattgctgttacaccaatttgttgtatt ttctcattactcattgactgaactatcgaaggaattattatttctcgtccaaatactgcagccagcgtttaaaggttcag ctctgtcaagatgtcatccatttttttcgcactcaacaaagcaattcacagaatgttttttgggagcctggtgacgatca taatgaaccttcctatgatgtctccaaagtgtttatatttttaagggttgagtggtctggtgctttttgccaggtgtttg tgggtttgtatggtaagttatcgcccacacaatttgtaaacatctggctcaccacaggaccaaatattaaccctgggatt cctgggggacaaactccttcgccaagctagagctaattgtatctggtttgatttctggtttgtaacatttttttttttca tttctctaccattgctttatttaatgtttattcatactttagtaactttatctgcctattttgaagccaaagtcagtggt gtggagagtaatagagaaaattgtattcataagaaaagacatgactttgaagtacatatatttctataaacaaggaagta ccacaggaacaaaaaggctaacaataaaactaattttaatgcaaaatactttgcagattttttggtcatacagcttctta aactcagtcactcgtggtcaatcttaatcaggaagtccaagtcttagtgtttaaaatttttgtttctgttatcctctggt taaccttttcattcctgaggggttccccattgacgagtaaaatcatctggaagaactatctaatgtataaccaagcaatt acctttgatattgcttaatatcctctgtgcggnnnnnnnnnnnnnnnnnnnnnctttgtttggtgaataaaaggtaccgt atttgtggtctacatatccatgtacatgtaatccatcagttagaatgcacatgttgaatgttcatgctgatgggctttca ttcaaatctaatcccaatcaattgaaggggtgcctggagaaaagccttaagtgacttctgataaattaccagattctcct tccaaatgtccttgtattcagttgtgaatgactatgagaatttgacattgcatcaaaagtaacttaaggccttattccac acaccccttcaattgctggtgagtcttcaggttcaaatatcaattctgtactactttcacatgcacagtaagtatctaac tggctgtcagctgccagttggagtttaaacttgcaactgtaaatagaggaagatggtggtctaaatttcatgtgctcatc atgtttattaaaatgcaccatactttgtttgttgttaggaaacattgactggaaaatatggtgaagattccaaactcatc tatgatcttgctgatcaaggaggagaattgttagctcttagatatgacttgacagtatccttagaaattgtgattttttt tgtgtctctatctttaaagatgaaataattcttttcaagatttgatagggttcaagtttccacgagaaaaaaatttccaa gagataacaaagctggctttttgagcgttagcccttcatcagagcaaattcacatcgctttagcctttcgtattattttg ccctgaagaagggctaattcttgagccatcagcttctttttgtcttcatggtggaaatttaacacttaccaacttgtttg atgccaaattttagtgtctcactttcccaccaatgcagctccacagtttctttcgaaacttacttttcatgcattaaaag tgtttttcttacaacagcctattctttaataaaagtatggcaaccagttctaagtgcaagattttctatttttgtgatga acatgatttaccctaaacagtgtggtgaatattacttttttccaagtatttatagtgggaaatacttgttagtttaatcc tttcactcccaaggggttccccattgactagtttaaatcatctggtgttacacgcagtaaaatctataagtgccatttgg cacagaagttaaagggttattaatgagtttgtgttgtagcgggaaaaatcgtgttgtctatcttttttatcgtgataatt caacctttatcaactttgatgaaacctttcgctcatgtgttcacttgccttcctaattttatgcacgtcaacagtttctt cagacagacagtctttattttagcacaatgatcgtaaaagctatgctgcttatggggtcatcatcattgcctcttttgtt tctttgctgaatttatttttcagtgtactgttcatcagtacacagataatattttccttgagcgtgtttctcaacatagg tcccctttgcaagatatgttgcaatgaacaagattgacaaaataaaaagatatcatattgctaaggtttatagacgtgac aacccagctatgacaagagggaggtacagagaattttaccagtgtgtaagtgctacatgtaactgataagttttcataaa ctcactgctttttggnnnnnnnnnnnnnnnnnnnnggacaacagtgattatttagaggtctgtaagagctctaggatcac ttgaaagaagaatcagttgagattcaatggtatgtttggtgaaatatttgataaaaattacattttgatttttgcttgac ttacaggtatcatttgatctgagtctggctcgaggcttggactattacacaggagtaatctacgaagcagtattagcagg ggaacaacctgatcttggaaaatctgaaaaaggtcagtaaaatctaataatttaggnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnccttatccagctctcttcacttctgttgccaagttcaatccatgaggttagggca attgtaagtctcttggatggcgtgaaaatgttgtcataagttttaattaaatgagttaaaagagaagtttcagcaagcga gcgttgacggttatctcgctggtgtgcgttggaacagcttcaatgattgcatcttttgtaaaaaccgaaagtgcatgatg acttcattgaagcgtcacgaaatgtcccttgattcttctataacttctgacgagaaatgcggagaataaaggtcaagtct cttggattacttcgtggatggagtcttcctaattatgtgagcaggacaatcttctgcagctctactattctgatgttgcc taagatcctgcgaatgtagttttctgttccctttttttgacaagcgcaaaagcaccaatgatcgctgcagcagttattgt tttcgttcccagtgctttctcaatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattattattattattattgctgcgaag caagggtagcgagcgagcagcaagttaatcaggatttaagacgactatgttatgtagaagtgggcacgaattttggaatc catcacttttcatcagaatgcattgcattaacgagagtgcattgcgccactttttgccagaagatgccaaaccgtcaagt cgtccttgttttacgtgttgattccagtgaattaagtaaaccaatccagtgctcggacagaatattatttgaggtgggaa gggtgctcttaaatcttagttttggcaacaccccatgatttcactccacgttgagaacataaggtcaatgtaagtcttgg aagcgcacaggtagatgaatcattgcgtaaaatatatcactgtcaacagaatgtgccgcagcattactatcttgtagata ccctagttattatgaatatttaaaattttccgaaaattctaagccaatgctttaagaatgtcgtctcttaggggaggaag aagatcactgaaggctggtgttaccgttaatatttttagtagactgcaaatagtcttctaatttctgcaagagacagaaa agaaacaactggaatggtgcacatgcctgagacttggatggcatgcggtgcacatgtcacgtttccatatgcatcactcc tcgcacaggcacatatattttgcctgcagtttgattttttcgttggtaatcctggtacaaggttaatatgaaaaataatg ggatcgaacccttaagaagaagactagaatgtgatggcaaaggtcttgaagtagttttgtgctacaatttgttgtatatc aatgtgaccttcttcaccgttagcactgtacgtacaatgaagtattcaatcaatgcttttcacatttaaatttgataaaa catgttgataaggtcagattaggcagatttaacaacaggatgggaacgtcagggaactacgtgagggtgcgtgaaatagc gtgcttccgctctgatttgaccatatttgggtatttgtattgcatgtatgtgccgtcgtcaagtgacattcctgttatct tgctcaatgagcctatcggattacgaagcttaacttctgattgctaggccttcttagccgctgttaaattaatgatattg accattatttactcatgatttcagttttcacatttcacttttcacatttcacttttcacatttcactttcccatcatcac gacactagtttcgttagaaactaaatcctttactcttacactacagtgacgctcttcacgctataagccgctggtattta aattcttacaagcgtattaaaatcctgtctttaaacgtctatcagagctgactacacttcgctagtgttgtctgcacagt gtttatattttgaagtcttaagtggtcttgtactttttgctagatgtttgtggttggtggtaagttgtcacccacacaat ttgtaaacatctggctcaccacaggaccaaatattaaccctgggtttcctgggggacaaactccttcgccaagctagagc taataatatctggtttgatttctggtttgtaacatgtttttatctctctttctctttattctccgtatttacaattaatt ctatttaatttcatcaccgtagtaaagtttagtatgtgacaataataaaggcagagccagtggtctgcagagaaatggga aaaattgtttacacagaagactggacttttaagtaaattattaccgtaaacaaggaaatacaacnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnagagttgtaatgttgggtactctttagcgcgattttactgcgattagatgcccccatattcta atagtttcgaacttcttcgaaacctgatcgctacgaaacagcgtcaagtggcagcgacagaaatcgcttgcggaaacggg tcttaatactacatttcttcgggaatgaggcaatttcggaaccaactgccccctctttggatgacacaagttttgaagca aatttcagtggaatattgttaagatcttgcgttttcagttggagtaaaactattgggaaaatgagctttgtagttagctg caaagttcaagaaaatagcgttttgcaccttgcgttgttgtggaaaattcctcgccgccatgatgaagggtgttgcaagg taagcaaagtaattgcgtttaccaaaaaaggacagttttaaaataacgaaagaccccacgaaaactgttgctacacagtt taaacatgcatggacttaaaatcttcactcgtttaacagggggacagaagggaaggaaagagcgtttccttacctcctct ccctccctcccttctctcatttttgcgcctttccaatttttcgcgtgaccaatacattgagaaccgctttcctcgatnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnntccacctccaaccccgaccccttaattatgaggtgatgagtcaaaaggagaacattgcatg aaggcaaaggtcgctgccgcgaagagagactttctctccaacatggctgccttttcttctgcctataggcagtttaagca aagacaatagggaatttaagaagctacgactgcaactgcaacgaaaacgtcacattaaaattgaactttgcgttaagtta agtcttttgcgattattccatgttgatcacgttgtacaaaatacgcgaattgtactttcgctagcttgggacgaaaggtt ttcatgtaaaggcaaagagtgaaagatttactgctgcgagttcgcgttgtcgtcggaacctcaaatatgaaaatttgacg tcgtcgtttggcagactacgacaaccaaatatcgtgccgcacgtgcagcacgattatttttcatcattcaaccaatcaaa tcattgatttgtggcgttgtcgttgacgttgccgtcgtcaaatgttaaattccctagtggctgctgcaacgaaaacgtcg cttaaaacagaaatttgcgctttgttaaacatttaacgattattcggtttcgttcaagatgtacaaaatggtcaaagtgt tttgtagcttgattggtccaacggttttgactaaaagttagagaatgaaagctttactgctgcggaatcgcgttgtcgtg aaagcttcaacgttggaaacttcaggttgttgttttgcagactacgtcaaagaaaggaacctaagtgcgtggcgcacgtg cagcacgattgtttgaaccaatcaaattactgttttgtgacgttttcgttttcgttgccgccgctgttgctttatctcca aatatggcgtgccatgacgtcaaagcgtgaaaatgctttgtactaccgataacacgagacaacctaatctccgtattttc cggcctttaggaacaagtgaagcgagatgaactctgcaaggaaatcaaaagacgttgtacagaacttgaagcagagtagc ttttcaattcagaatattgctgtttgttacgttcaagtgaacgggacaatttctcattgcggatccccccaagattataa ttgtcataataatttcgattcattgtc |
Protein
Protein ID | aug_v2a.10192.t1 |
---|---|
Definition | - |
>aug_v2a.10192.t1 MMSSKLIRNIFTVPKLLRVAQLSCSHCLETELKEEIAKLIELKKQLGDDQGNQKFVLKTPKETLTGKYGEDSKLIYDLAD QGGELLALRYDLTVPFARYVAMNKIDKIKRYHIAKVYRRDNPAMTRGRYREFYQCVSFDLSLARGLDYYTGVIYEAVLAG EQPDLGKSEKALFTSVAKFNP* |