Gene
Gene Model ID | aug_v2a.10517 |
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Locus | scaf4028 : 9176 ... 14176 : + |
To GenomeBrowser | scaf4028:9176..14176 |
Genes list of scaffold | scaf4028 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 12-2 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 12-1. This gene model has RVP and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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uncharacterized | GO:0005488 |
Transcript
Transcript ID | aug_v2a.10517.t1 |
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Definition | - |
>aug_v2a.10517.t1 ttgattcagttgtaataaatcagttgtgtagagcacttggcctgactcactgtacactctatagtagtacttcgaaccct aatacacaacaattagcgacgaggatggccactctcggaacaatagagtccttcaaccccagtatagaagactggaacgc gtacagcgagcgttttgaacagtacgtgatcgataacgacatcaaagacgagaagaagatagtggcaacctttttgacaa cgatcggcagcaagacctacaacgtcttgagggatttgcttgccccagcaaagccatccgaagtcaagtttgaagaattg gtgaaaactttacggaaccactacgagccgaaaccaatcgtgatagccgaacgatttcactttcataagcgggaacagca cgagagggaaggtgtggcggcgtacagcgcagccttgaaaaactgttcagaacactgtgcctttggcactttcttaaaga agcacttagagaccgtctcgtctgcgggctaagaagtaatcagacacaaaagagactgttggcagaaaaagagcttacct ggaaggcagccgtggaaattgcattggcaatggaagttgcagataagcaagccagcaatttcaggaatttgcccgagatt gggggcataaactatgttaaaccaccacatcctccgaaaacacccaagcaaagaaagccgtgtttccgttgtggtgaaga ccacgtccctcagaaatgccgatttaaagatgagaattgtaggaaatgcaaatcgaaagggcacattgccaagatgtgca aaaagaaggcttcaaccgcgcgtacagagcagaattggaggaaacaatcagtttggtatgtggaagctggcgaccaacct ccaaacaatcaagacgacgagttcaagctgttccaaatcagtcaagataagcctgaaccgtctatcatgctgccagtaaa agtgaacggcgaagactgttcaatggaattagacactggtgcgtccgtttcgatcatgaccgaagaggcttggaagaaaa ggttcccaaaggctccgttggagagatcgacactaaagttgcgtacgtacactggggaagcccttgacatcatcggacag gcgcatgtgcaagtcgcatatcaagaccagaccgcaaacctgccccttcagataatcaaaggaaaaggaccaagcctatt tggaaggacctggcttagagacattaaattgaattgggggtcaatcaagaagataagttgtgatctacataatgttttaa ctaaacataaatcagtgtttaatgacgaattaggtactatgcaaggcaccaaggctaagttgtttgtcaaatccggccca aagccaaagtttttcaaaccgcgcccagttccgcatgctttaaagggagctatagagcaagaattagatcgcttagaagg catgggagtgattgaaaaggtccgctactcagagtgggcggcacctatagttcctgtggtaaagcctgataattccataa gagtttatggggattacaaaattaccgtcaattccattttggaaattgatcagcatccgttgccaaaccccgaagaatta ttcgttgcattaagtgggggagtcaaattcagtaagttagatttgtcaagagcttatcaacaaattcttttagacgaaga ttcaagaaagtatgtgaccataaatactcacaagggtctgtatagaccaactcgtttaccttttggggtatcctctgcct cagctatttttcaatcaaaaatcgagcaagtactccagagtataccgatggtagtttgtagagtagacgacatcttaata tcgggtaaagatgaccaagagcatttgagcaatcttagtgaagttttaactaggttggaaagcgccggtttcaggttaaa acttagcaaatgtcatttcatgcagccaactgttgagtatctgggttaccggatagatgctcaaggattgcacgcaatcg agaaaaaggtcgaagccattcgacatgcaccagcacccgaaaaccagcagcaactgagatcatttctcgnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtgctaatttacaagctcaacataaaggtactcaatct ctacgcctttatcaacccgtccgcatcttttgatgtaaacaatgggttcacgccatttgttgcatgaattacatccgcat cacccacggtggataccgtcatcgacaacgatggacttgtccgcattgtcgacaccccttacatggtttgtgatggcttc tttcgaacgtgtaatatgaatcttgatttctcgaacggtaatgtatcatcaagagctcccgttccagtggtgatccagat ctgtagaacattgaaggaggtactgcgtattttcatgtacatccgctgttgcggtaccaccaaaccgccgtcgcctggaa tctctgcgtggtataggatgtacttattattgtctttgttgacttgttgtggtacgatcaaaccacagttgatgtcgaca tgtttatacactttctcgggaatgtatcgagtagaccatggtgtatgtaacgcaaacacccaatccacgctcgaaaataa gttgatttcatcgttgttcaatgtaaacgtatcggttcttttaatgttgtcgttatctctgagcctgtaatgaacgccac tgcccagacctgtccccgctacattcaagacacccatcatttgagccaatgtcttgtccagggtaaaacgacctcccttt agagcatatcctttgagtgtcacgccatacgtcgtttcctccagggtctggtgtaacatatccccattgctgtctttagg gtacgctgccgtcacggacgaatcggttcggagctcgtacacgattttgttccaggccaccgaatagatcatcttcaaca cgtccaatttagacgtgccattccctaccccatccatgatgtcgtcgacacgtatagtcgttgtcttgcttaccgaggtc gtggcctatggactcgttttgtaatgtaccgccaatcctcctattaatttattgttcggaaaatacttcttgaagttgtc ccgaaaatgggaatcactgtgtggtatatacgcttgtactagagccacttcccagtcctcgccaaatgataaattagtaa ataacctaatattatttgtaacatgcgtcccactgaccaccgtgatatatttgtccgtctccatccttttttacaaaaaa agcgcttcactccactatatataccaggtttgatgacgtcatttttatccgaccaatcacagcgtctctggtctgcccat acaaatcctctaacgctttttaggggggtggttttgaccaccccccaattttcgaattgaccaatcacagccctccattt agtcacgtgatactttctctcgaccaatcagaacgctccattttcccattagccaatcagaacgcagatcgaatagtgtc ctaaaggtgcgcataccactactgataagataaaaaaacaatttggtttttacttgttaaagcctggagctgaaataatc ctaagattttctagccaattctccagattttaaagttgtaaataattgagattagaaactattttaaaagaagcagtttt aaatgggcaatgtaacaagagagaaagagtatatgcttaagttgtgttaaataaggtttcagttgttttgagtttatatg cataagttgtatttaattatgttgttctgacagttaataaggtttcagttgttttgagaatcgatatacgcttagttctt tgagatttaagggaattttgtcccagataacacattgtctgttttcccatattagttcgcaccttttttacgtagaggtt ttgcttcgatgcatacctggtattgcatctgtgtacattactggcatattgaaaataatttgaaaacggctttggcagga ggcctttatgccaaaggtacgtgaattttaggatctgggatttataaacattatgtactgtgagaacatctaacaagttt agcaggggaagtgcactttctgtgtgctcaccatgaacggtggcaaagacaataagcccagcagaatgattttgtttagt ttgtatcttatcaatatgtgttttctatgcacttccccatgctaatattgccttatctgattctttaacatagattcggc ggcaattttgcgacgattgtgttgtctggaattggtgtgttttcaatgaaacgaacaaaatcagttgtgtctttaatgta cgactcttttttcttagcgatgggctgtaggagcgagtcaataaaactttaaaggacaaaccactcaaagaccttttggt cagagctaggaccccaaccttaaaaaaaaagcaaactctag |
Protein
Protein ID | aug_v2a.10517.t1 |
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Definition | - |
>aug_v2a.10517.t1 MATLGTIESFNPSIEDWNAYSERFEQYVIDNDIKDEKKIVATFLTTIGSKTYNVLRDLLAPAKPSEVKFEELVKTLRNHY EPKPIVIAERFHFHKREQHEREEALRDRLVCGLRSNQTQKRLLAEKELTWKAAVEIALAMEVADKQASNFRNLPEIGGIN YVKPPHPPKTPKQRKPCFRCGEDHVPQKCRFKDENCRKCKSKGHIAKMCKKKASTARTEQNWRKQSVWYVEAGDQPPNNQ DDEFKLFQISQDKPEPSIMLPVKVNGEDCSMELDTGASVSIMTEEAWKKRFPKAPLERSTLKLRTYTGEALDIIGQAHVQ VAYQDQTANLPLQIIKGKGPSLFGRTWLRDIKLNWGSIKKISCDLHNVLTKHKSVFNDELGTMQGTKAKLFVKSGPKPKF FKPRPVPHALKGAIEQELDRLEGMGVIEKVRYSEWAAPIVPVVKPDNSIRVYGDYKITVNSILEIDQHPLPNPEELFVAL SGGVKFSKLDLSRAYQQILLDEDSRKYVTINTHKGLYRPTRLPFGVSSASAIFQSKIEQVLQSIPMVVCRVDDILISGKD DQEHLSNLSEVLTRFGGNFATIVLSGIGVFSMKRTKSVVSLMYDSFFLAMGCRSESIKL* |