Gene
Gene Model ID | aug_v2a.10546 |
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Locus | scaf4035 : 7666 ... 12813 : - |
To GenomeBrowser | scaf4035:7666..12813 |
Genes list of scaffold | scaf4035 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 53-11 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, DUF3342, BACK, Kelch_1, and Kelch_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.10546.t1 |
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Definition | - |
>aug_v2a.10546.t1 ccatggactggggatcgttacagtagtgttctgtccgttaccatatttcagcgccatttttgagagctgccgaaaaatat ccttggaatatggtatctgacgtcagtgatcctcgaatgtgtgttttctgagggattgatcgtcttccacctgcaacatg gtcgctcattctgagattctcttgtcgaaatgtgctcagttccgtgagcaaggtgaattcatcgatgttcgtttaaaagt tggagaggacgagtttccggctcatcgcattgtacttgctgcaaatagcgattattttcacgctatgtttgcacacggaa tgaaagaatccaaccaggaagtgatcgagcttaaagatgaaaacatttctgtttctgctatgaagatagtgatggattcc atatacagtagagagatcaatgtgaatgatgaaaatgtttttgaagtattgactgctgcagatcatcttcaagttacaag tgttgtgcaacaatgctgcaaatatcttgagaccgaactcgttgagctcgggtttgatgtgaagttttactgccgcgtca tcatggtcgctgatcgacgcggtttgaaggacttgaaagaggcttcggaaagtaaaatggcgtcagtgtacagggaaatt tgtgagaaggaggagtttttgtctgatatgaatgcagattcattatcagctcttctctgtcgagatgaccttagagttcc atcggagaacttcgtcttcaaatcactgatgcagtggatcaagtacagcaaggaagaaaggatggctgtggcaggtaaac ttattggagctgttcgtttgggactggtggacatcaaggatgtgattgaggaactcgataccgaggaaatgcagttgatc ccagaaataaacatgttgttgcagagagcattaatacacaattgcaggccttcgagcagttccgcgtttgcgttggaaag agcgagaccgagatcaaagaacccggtacgaacatttactttgcacaagagtctcgtttgttaagagcagttcacttatt tttttctgaatcattcaaacagttttatctttctgatatgcagacgccccaaaaccacccctcctgactttcgtgaatgt cgactctttctgcatatgaaagagagtgaaagactttaaaaggtttcctgggaatataataaccatgaaccaatatagta gtgggcagcccacaattattttgcccagaagaaagaaaaacttctgttgaacttgctgcaataatgtgttgtggaaccaa aaaaaatcgagctgttgaagttatgaattcaacgaacgctttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc tcaaaccctggcctctgtgatgccaatgcagtgttctatgagttgagcggtcagaccaactgggaggatgccaatatttg agtccatgctaggatcatatacactgaagttgtacatttcatgtactcattgcattcacgtatataaacgaaatgtttgt tgagttattcataacttcagcagcttggtttcctttgcttccacaaaaaaactcgtgcagcaagttcaaaagcagttttt cttgcttctgcacaaaataataggccatttccgagttcacctcagcctccatttaaaagcgaggctaagtgcaaagtctt tgttatgaaaatcatcttttattcgtattgaaattggaactaattaccataacaaaagtttcgaacttagactcgctttg aaagagagactaacgggaacttggaaatggcctattgagggctgcacgtaaattgtgtatacgatttatgtgtatggatc cnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaacacaaatgaagacaagacaaggtttgaagaacacctatatttcaa ccaccttgtcggtcttcttcagggtgaatgaagaaaaccgttaaacaaaatttctactatgccagtgaaatacgaaagcg cacgctacgactttaacggtaaataaccgtagcaattcaaacataagtgacatccgcacgtgctgaaggataatatacgc gcgtgccataggagagcaagggaacggagatgataggaattatgcgaagaataaaggaaaattttttacttagggccact ttcccctccattgtggccaaaaaataagtccttcattaagtccaaccggttttaaggagcagagccgatatacccatggt ccttccttagcaagcagatggtctttatcattaactttatctataagttggatgctaacatctggaagtccatgatgccc atgactataaaaatgcctatagataaggtcgtcgctctccttatcaacagctgacatcctagagtgggctcgtaaacgac tcttgtggttgttgaaccttaatccaaacttagtggtggtggagccggcatatatatataaatgtcacatcctccctcaa cccaactctctcttttgaactagaccattgttgaattgagtaatggcgggcaatcgttgtgagaattcgtagttcaaaaa gtcagacttctcgtcagtcatggcttaaaattaggcatggtaggtacctataatacatagtttcgaaatataaaagaaaa ggtaaggtgacttttttatcatagtaccactttaattgtaaaattggtgttgttgtctttgagtagactctacaacatac atcatcaacaagcatggtctcaatgttacaattgaagctgccaagaaattattgttaacttccttgatgtgaccttaaat ctgaacaatggaaaatgaataccttacaccaaagaaaacaatgttgcactctatatcaaaaagaaatcaaaccaccctcc ccacatcgttgagatcatcccactgtccatcaacaactaaccccctctttagcccctgggccagctgtggcattaacaac tacaggagttcaattagtcatattacaaagataatgtatggtgttgaccattatgtttttcaggtacttattgccattct tcctgagagagtcatctcttattttgatgtccagtctaaaacatggaaggagttgtcattaatggagccactaactgaga ttcaggaatgttattgtgttgaagttattggtaattatttgtatgttgcagcaaaaagcaaccacacgtttgttattttt tgttatgacataatttgtgacacttggagcactctccaaccaattcctggctcatcaggcattcgaattggctgcttgtg caacattgaagaacatctctatgttatttacaagtcttctgcacctttcagatataacataactacaaatcaatggcagt ctatctctagctcaaaagctgtttgtgacctgggccaaaacacattttgtaacaaagcagctgctgtgtacaaatcatgc ttatatgtattgtatgggcaagcagtaataggtaggagttactatgatagttttgaatatttttcggctcagctatattg tttcgatccaaagaaaaatgtttgggaacaaaaagcatcaactgaaacaccgcactttgggtccagtcttttggtagtaa agaatagcctctatgttgctggggggagatgctcaatcgtttcaacaactcgtcagcttggagacgatcctgctgccatt gaagtttacagtgaccaagaaaatgaatggtctgttgtacaacaaacacacattccaccaaataatcttggggctgtaga aattgaagggaggatatatttcatcatcaactctttcccagttgacagcggtattacaatcccaccaggacaggccaacc ctgttgatttgactgagtgggaaaatttacaatatactaaaaaaaatgcagttttgtgttatgcaggggtttcaacaagt tttctaacaagtgactggtagaggaagaacaggtggctgtaacaacaaagggggtcatgaggactcttttcactggaggc atgctcccccagcagaatttaaaactaatttcagacgctcataaataaaatttccatcattctgggcatcaaaaagagtg ttgtttatgataatttttattggcccatgaacacagtttttgaagaaggtaatgtgttagatccatttattatttttaga aatcttagaaattgaaatacaaactgaatagacagtggcaagaagcttgataggcagcagtaaactgcccataactgact tttgttgaaacccctggtgctatgttcctttgaaaacagagaatcttaaaacagacaatgaataaggtgaactgcaattc aaagcggacagactgccaatgatagtagttgcttaaaaatatatctgtgttgcaactgttcatcagtaggatgcctaaaa tgtgtgcaattctacaattgcaaaactgagctatcattataagtgctttgatggcatcaataattattttcaattctgca tggtggtttaagggttttccacatagttttctcttttttttctttatccttcccagtacgcctgagcacatataaccatt cactttaaaataaaccttcctttaaacaactggccacaggaaaacaaaaaaaaaattatgacattcatctcttcacagta gtaggcagcacataaatgaattgtctatctttaggactcttgtgatataattgtacgtagaagctccctcaaagtagatg ttcaaactgtcagccaacagttagttttgaggagtggtttttcacgtttaccaataaccaagaaatggactgatttttct atgtgactgtgtagcagacaattgtcttattacggtaaccagcaaaggattttaagggaacacaagataccaggctgcct gagttaaccttatcagcgtacatgtaatccagaaatttgttcttttatgaccaataggattgttttggatcataaatatc cacttcttacatgtctgtgtacaaatttttctttttgtatctcccctaaccaagcataccaacaaaggaaattattactc aagcaatagcccatttctgggtcgctatttaactttagttttgaacaatcttagtccacggcaggaagcattaaaaatag accctaagaataaatatatttttttaat |
Protein
Protein ID | aug_v2a.10546.t1 |
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Definition | - |
>aug_v2a.10546.t1 MVAHSEILLSKCAQFREQGEFIDVRLKVGEDEFPAHRIVLAANSDYFHAMFAHGMKESNQEVIELKDENISVSAMKIVMD SIYSREINVNDENVFEVLTAADHLQVTSVVQQCCKYLETELVELGFDVKFYCRVIMVADRRGLKDLKEASESKMASVYRE ICEKEEFLSDMNADSLSALLCRDDLRVPSENFVFKSLMQWIKYSKEERMAVAGKLIGAVRLGLVDIKDVIEELDTEEMQL IPEINMLLQRALIHNCRPSSSSAFALERARPRSKNPVLIAILPERVISYFDVQSKTWKELSLMEPLTEIQECYCVEVIGN YLYVAAKSNHTFVIFCYDIICDTWSTLQPIPGSSGIRIGCLCNIEEHLYVIYKSSAPFRYNITTNQWQSISSSKAVCDLG QNTFCNKAAAVYKSCLYVLYGQAVIGRSYYDSFEYFSAQLYCFDPKKNVWEQKASTETPHFGSSLLVVKNSLYVAGGRCS IVSTTRQLGDDPAAIEVYSDQENEWSVVQQTHIPPNNLGAVEIEGRIYFIINSFPVDSGITIPPGQANPVDLTEWENLQY TKKNAVLCYAGVSTSFLTSDW* |