Gene
Gene Model ID | aug_v2a.11059 |
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Locus | scaf4266 : 75 ... 8905 : - |
To GenomeBrowser | scaf4266:75..8905 |
Genes list of scaffold | scaf4266 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-1 |
Description | This gene model has RVP and TPR_1 domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.11059.t1 |
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Definition | - |
>aug_v2a.11059.t1 tttggtgagaaatagcgacgaaacttctaaccaaatatggacgacagcaacggcactagtagtacaactccgccaacaac aagtagcagcatagccccgactctaagctccacacaaatcttcacttctaatgttcccttgccgccaaggttggaacttc gaggaaatttggcgaaaaattggaaaaactggctgcaaacctggaaagcgtacgagacaataacaagcttacatttgaaa ccacaagattatcgtgtcgctactttcatcacttgtattgggcctgaggctctagagatccacagcgggttaccgtttgc atccgaagcagagaaaggtaggatcgacaaagttttagagttgtggaacaattattgcgttgggaaaacgaacactattt acgaacggtacaagtttcacaacagatcacaagagccttgcgagacaatcgacgcctatgcaaccgcagtccgcacgttg gcagacacgtgttctttcggtaatttgaaagaagaaatgatcagagacaggcttgtgtgtggaatttccgataatggcct tcgtaaaaagctacttcaagaatcacagctaacactggagaagtgcatggattattgccgagcagccgaggcagcaaata gtcagctgaaagagatatcaagccatgggccagacaccgtaaattatctgagtaaacccaagaaaggaaagcctcagtcg cagctacagtttcgagcacagcccaagctcggaagaaacattgcctcttcagccagcaaggaaatgaccatgagagactg taaatattgtggatggaggcatgagcgtaagaaagaagagtgtcctgcatttggaaagacctgccactcgtgtgggggaa aggatcacttcagcaatgtctgccaacaacaaatacagtctggcaacaaagcctcctcccgcagcaacctgcagcagaac aagctgagagtgcatgagctacacgaagatgcaccaacctcatctgaggatgaactttgggctctctcgttcgttgagga agttcatagtgtttctgacaagaagaaacgaatctatgcagccatggaaattggaaagaagacagtggagatgcagatag acactggagcatcttgtaatgtcctcccctgcagttgcctcccaaacggaacggaaatccagactacaaaaagagaactt atcacttactctaagtctaaactgagtgtgttaggaacagcaagagtccacattcgaaacccatgcaacaatatagaata tgcagcagagtttgtcgtagttgaggatggattcgaaccgctactgggagctgagacagcacagaaaatgaacctcctgg tagtccagcaccagaacatcctgcaacgcgaccacccgacacctaagatcatcgaagacagcatcaatagtctgactgaa gagcaagttctagctgagtatgctgacctgttcaaaggccttggcaagattgagggcagactacacttagaagttgacga gacagtcccaccagtagtaatgccgccccgtcgtgttccagttgcagtaaagggcaaactaagagaggaacttgaccgcc ttgaaagcctgggagtacttgagaaggaggacaagccgacccaatgggtatcaagcatggttgcaactcagaagcccagc gggaaggttagagtgtgcattgacccacagcgcctcaaccaagctttgaagcggcgnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnggcttcgcgctcgggccgcaaatgacactacgcgggcgcaaataaacaatattccct caaaaagtcatgttattcccttattaacacaaaatttgcagttcagttcaccttgcgtgttatattaaatctcagaaatt gtcttccacagtttttcgttattggtctgcgtatttcttcatatagtttgctctggcctttgaatgaagctcagcaagac gttggttgggttcgaaattgccgggaaactcctcgctcaccttcactattgattccatcacttcacttgtcaagtggtga gaacgcaaaaaaatgacgactagacaatctcatgttaaaaaaatttgattccccctacgttccacctacattttgcagtt ttccccgtaggttttccctactacctacaaaaggctaaatccccctactgtaggggaatccacctacaagtggtagcatt gttttgcacatggtaatctgatctgaataaggcgaggccgccaagtcacactcgccatgaacccgtcacgcaatacagac aaaaatattctgaacataaaaaacaaaccagacattattaatcaaaattccctgacatggtttttttagatcaaggtgtg tccgcaatcaatattagggaatttaagaagctacgacggcaactgcaacgaaaacgccacattaaaattgaactttgcct taagttaagtcttttgcgattattttatgttgatcatgttgtacaaaataggcgaactgcactttcgcttgcttggtacg aatggttttcatgtaaaggcaaagagtgaaagatttactgctgcgaccccgcgttgtcgtcagaacctcaaatatgaaaa tttcttgtcgtcgtttagcagactacgtctaaacattgcaccaaaaagcgtgccgctcgtgcagcacgattatttttctt cattcaaccaatcaaattattgatctgtggcgttgtcgttgatgttgccgtagtcaaatcttaaattctctttatttcgt acctaatgactgtagcaagaaatcgaaatttccatatgcaaatcatacctcgtatgattgaaggaaatcatttcctaaac agagcaatttcgttttcctcgcgcaaatgaactcgtggcattatatatgtgaggcatccacagagttcactcactttgct ttcagtcaagataacttcagatcaactcatcaattgttcgtccgtttcttttggctgaatccgggcttaagcaacaggta agtacgaagtaacactttcataaacgtcatgcatttgcaatcattaatcgttttgcaaacggaccaaaatcgtttgtttt ttctgaatgacataatttccttttgcgatcatagttggtaaatgctgcgatcacatctgcgcgaaaattgattctcacgg aggtcgtcgatgcaacactttcatcgtaaaaatgaacagttaaacagtatttaagtccagctttacaaaatgattatcat ggatttttttattcaatccaaagctagtgaaataaacagacaatgaattagttaacggacaagggcttagataacaaagg cctcatccttcattttagatacacgcatacgcgtgaaattacatttaattgataaaagtgaatgattgtcttcattgata tgccattgacttgattttgcaatatttacaaagctagagagaaaatttcacttttcacccacatttaataccagcttttt cttttgaaccagaaacaaaaatgataagtgtttttagcatatgacatcactactcttgtcaaatgaaacagcaagatcat ttcttttgtaataccttattatcctaatgttactttgtttctatggaacatcagcgaacactgaacttctgctcatactc taaataagacaataaaccacaaaattccgtaaaccagataaccgtccaaaaaaataatttaagtcatctgtccaattcac cagtttgctcacagaacgctttgatttggattatttatcgatttcgtaaggaagaaacagatgatgtgcccaacacaaga aactgaagcttttcgtcaactaaacaaaaacaacaaaaagttttccaaagtctaaaaatagtttatgatccatgttactg atgaagataatattctgatcagctcgaaaatgacagtcatgcctggggggcaaaataaatggctaaacgtcatatttgaa ttctgcaacgcgatagatatggtcattttactagtcctgaatagttatatcttcttctcctggtcagacgttatcataac catcatcatcaaacagcttttatccgggatcattaaaacactcacgttggtatcaaataatgaagaaaaatatttgagtc tggtgtgcatcaaagcgactacagtacaaatatctttactggctgcagtttacagccctattccgaaatcaagactgaaa tacgttcaacataacaatccatcagcaacaatatctatctgtcagtctctcccaattgagatttcgcaaaatccaagtaa atatttaccaatgataccagtgccgtagcaaggggaggggccggggggggccgtgnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagt tttcaaaaaatgacctgccaatgaagtctacgtctgtctctacggcaactcagacagtttaataactacgaacttactgt gatgactctgaaaggtgaaacatttgctggtttcaagatacagagatagttggttttctgttttgtaattgacgttgcaa gtgttatactctcaatgcgcattggcttgctaagacagtgtacgaagtgaataattcgcgatatacataaatcacaaata gctcttggagaacgctggaaatagcatttccaagtctctagattacaaatttttctgggggagcatgcccccacaccccc ctagtggctcacgcctccagcacttgcgtgcccccccacttatattacccttgctacggcactggatacttaacagttat tcttcgaggacgcgctggatatgagctgatacatataaccaacgaggctgtaggccgagttggttattatcagctcatac ccggcaagtccgcgaagaataactgttttagtaaattttcaagcaattctcttgatttcttcgtgtgaaacctcctcaaa tcgtgacattttctttaccgacgacgccgcgaaagtttttccgacctccagaatttcagcacaagaaattcgccatcagt ttttccttatttggtcaaacttaatgataatggctcatatcatgggctttaggaaccaatcagaaagctggaaaatcatt atcctgagctaacaatttactaatgttatttattcatcgtcattatgtattcaattatccaatgttttctaatctgtggg cactgagtccacagtccgtgtccgcaatctttcgtaatgaccgtgccaagaaatcgaaattcccatatgaaaatcatatc tcgtgtgttcatttcctgaagagaggaacgcaaatcaactcgtggcgatatatacgtgaggcaaccacatagttcactca ctttgctttcagtcaagacagcttcagatcaactcatcaattgttcgtccgtttctttcagctgaatccgggcttaagca acaggtaaatgcgaggtaacactttgataaacatcatgcatttgcaatcattaattgttctgcaaacggatcaaaatcgc ttgtcttttctgaatggcataacttccttttgcgatcatagttggtaaatgttgcgatcacatctgcgcgaaaattgatt atcacagaggtcgtaaaaatgaaaagttgaacaatactcaagtccagctttacaaaatgattatcatggatttttttatt caagctaacccaagtttatgaaacgtgttctagtgccgacgctttgaactaaaattgacgaaagaaatccaaagcgctat cgattattacttttgcgctgtcttgcaatcatcaaatcatcatattaaattaaactactgagtaagttggcttcagaaag gtttatttcggcgatagtgtgtttcactcacgatgttgcaatgttgacacgtgcacgaacttgtaaaatgttgtgatgtt gcaggtaatccttcaaaattttgcagtttttcttaatagtttttccaaccttttaaaaatagaattcaccggccttggtc ggtccgtattgggaaaaactgtgccctctgtctctggccgtactcgagacctcgggcacagttttacccaatacagacct ctcggccggtgaataatatatatatataatcttaataacattacacttatagttactagtaataagaaaggctttaataa tcttcaatagacaaaattttttttagggtgtttgaggatttaccctacttgagggtcccaatgggggggggggtcccttt gacggttgacggttaaaaatgagtcgttttgacggttgacggttaaatcttctaacggcactgggagagctcctattgat tattaccatttgcgtggaacacctaacgtgcgcttcctctctgctcttcgcttagtagagtcaaaggtcgcttctgtcta cccttcccgtcaggctgcttttttttctccgtgtcccagattttgggacacacattacaagaccagaccaaggtctcttg gccgattagaagggagacactgggaacgaggttaaaaacccttatctcaaaacccctaagctcaagatctaatcttgaca tgttaaaattagttccagatcgttaagattttttgctttaaacgatacatcttagtgccataaaaaaaaaatcaatgaca ctagttgacaacatttcctttactaaatgttcctcctgctgttaagaacgtcattttctttttccttctatttttcttta ccactaattagctattaatttgcttgctattttctcttgaaaaagaaatggataaccaacacagaagtggaatagtttat gtcagacacgtaagagatctccagttacggggtgacgataaaaaagccattgagaaccttgaaaatcatttaaaaattgc aatagaaattggtgatcgggccggagaaggaaaagcctatggaaatctcggaaatgcttaccagtcactgggtgactatc gaaaagccgttgagtatcatcaaaaacatttgaaaattgcaacagaaattggtgatcggggcaaagagggaaaagcttat ggaaatctcggaaatgcttaccagtcactgg |
Protein
Protein ID | aug_v2a.11059.t1 |
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Definition | - |
>aug_v2a.11059.t1 MDDSNGTSSTTPPTTSSSIAPTLSSTQIFTSNVPLPPRLELRGNLAKNWKNWLQTWKAYETITSLHLKPQDYRVATFITC IGPEALEIHSGLPFASEAEKGRIDKVLELWNNYCVGKTNTIYERYKFHNRSQEPCETIDAYATAVRTLADTCSFGNLKEE MIRDRLVCGISDNGLRKKLLQESQLTLEKCMDYCRAAEAANSQLKEISSHGPDTVNYLSKPKKGKPQSQLQFRAQPKLGR NIASSASKEMTMRDCKYCGWRHERKKEECPAFGKTCHSCGGKDHFSNVCQQQIQSGNKASSRSNLQQNKLRVHELHEDAP TSSEDELWALSFVEEVHSVSDKKKRIYAAMEIGKKTVEMQIDTGASCNVLPCSCLPNGTEIQTTKRELITYSKSKLSVLG TARVHIRNPCNNIEYAAEFVVVEDGFEPLLGAETAQKMNLLVVQHQNILQRDHPTPKIIEDSINSLTEEQVLAEYADLFK GLGKIEGRLHLEVDETVPPVVMPPRRVPVAVKGKLREELDRLESLGVLEKEDKPTQWVSSMVATQKPSGKLLICLLFSLE KEMDNQHRSGIVYVRHVRDLQLRGDDKKAIENLENHLKIAIEIGDRAGEGKAYGNLGNAYQSLGDYRKAVEYHQKHLKIA TEIGDRGKEGKAYGNLGNAYQSL |