Gene
Gene Model ID | aug_v2a.11450 |
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Locus | scaf4447 : 5373 ... 11115 : - |
To GenomeBrowser | scaf4447:5373..11115 |
Genes list of scaffold | scaf4447 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Trp3 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Mus musculus short transient receptor channel 1 (NP_035773). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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transient receptor potential-gamma protein | GO:0044425 GO:0044765 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.11450.t1 | gi|499019724|ref|XP_004560648.1| | PREDICTED: short transient receptor potential channel 4-like isoform X1 [Maylandia zebra] | 0.0 |
aug_v2a.11450.t1 | gi|548389694|ref|XP_005736066.1| | PREDICTED: short transient receptor potential channel 4-like [Pundamilia nyererei] | 0.0 |
aug_v2a.11450.t1 | gi|554831936|ref|XP_005926525.1| | PREDICTED: short transient receptor potential channel 4-like [Haplochromis burtoni] | 0.0 |
aug_v2a.11450.t1 | gi|542233690|ref|XP_005455084.1| | PREDICTED: short transient receptor potential channel 4-like [Oreochromis niloticus] | 0.0 |
Transcript
Transcript ID | aug_v2a.11450.t1 |
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Definition | - |
>aug_v2a.11450.t1 cttaatatcagaacacagaccaacagagaggtgggtttgtgagaagtgtcaattacttattataacagcattgaccagtc cgattattgttacttttttgcggacgtcaagttataatgttgaatttttggactgagtatgatattaatcgatcctaaat ggaggaacgcttatccacactatgtttgacggcatacgtcttcttggagtttattcaattttattttttgtttcttaatt tgcttattttgcttactactcttgcaagggcgttttattcaacgattataacatcgctatgttctaattaaagccgccgg gcgaatgtaatttgtaaaacaaaaacgtgactccttgaacccctgataacattcagaaacagcttcataaagtgacgatc acggtgtccccagctgcagtagcctctgtcatcaacatcgagtttatgtaatttaaggtggacacgtaattctacaccgg gaaggacctacaaattggccatttccgaattaaacttgcaaggcctcgatctttttcaaagcgagtcctgctgttcatcc tttcatatgaaaattagttttaatttgcatgtgaatgaaaacactgtcgggataagaaagcgacgtttcgaccgttcaaa gctcattatcaagcaaagataaacatttgcataactactaattatataataaaacaaagaagtgacaaatgtaaaaagca cgaaaatgttaaaaagcggggtattaaaaacaataagaacatacaagaataagataaaaaagaaaaccctttaaaaacgt tcgcacaaattgagtcacattgtacattgagaataatatagatctaatgtaaagaaaatatggttgatttcttgcccaaa attgtttttataagttgataaaaaaaatgcagacattaagctttaatgattaaagtggtttcttagtgtgatttaattga tttgaaagctttgcttaatttgtctctgatgaggtaagttcgagtttaacgatcaatgcgaattattctttgaggttcac ataaaaacaaaccgtttcatatttatttcttaatttcaattatgcttcttttgcagaagctttgacaaaattgtaatgaa aagcaggtaatgagatggaggctactgatattttcctacaagaactgaccgtcgacggtacagatggccagcaagagaat atcaaattgcaacgaaaacttttcaaagcaacaagaaaaggagatttggagagaatcaagagccttactcacctgaaatg cgaaattaactgcgtaaaccactctggtaaaacattgcttcaagtagccgcagaactgagtgacttgagccagcgtcatg aagtgatagcagctttactgagcagcggagctgacctggagtttggtatgttgcatgctatacgcgacaataacgtaaaa accgtgcaaacgcttttgtcattttatgacactgcatcatcacctcatcccaggactcaatcaaaatgtcaaggacacat cacaccgctgattctagctgcttggttacagcattttcgcatcgtcaaactcctcttggatcatggatttaccataagtg atgtaaagtggcctagggcggacttcaccggagaggccgtggagaaactgggacctgccgtataccggttaaataggtac cgcgcacttgctagcccagtatacatcgcgctgacatttcttcaaaacgtggagagcggtccagaccccgtccacagagc atgcgtgctcaacaaggagctacatgatactgctgatcaggaatacgagtttagcaaagaatatttggagcttagtgata attgcaaagagtttgcggtggctctacttaatgaatgtcgatcaatgaaggagataaggtgcgttatggagagggcgagc aaatgcgcagatgtggttcttaatacgcaaggaaagtgtttaaatatcttggagtttgccattgcaaccagaaatgaaaa ggtatgtccttgaaaaaatatcaccaaaaacacagcaacaaaatttttcagttgcagctttgctcacgtatatttggggt tctttatacggtatgagaaaatattccattttccctcacctttaaatgcgttttacaagtgacataggtaatagcatggc cgagctagtgggggatatgaatctaatttctttttgaacgtcacagccttccaatttaagcagccagttgtggcgtgtag ggcatgactctcactagctcggtcatgggaaatgtagccaccatttttgctatttctagacaattgtgctgcgcataaga aagtgttattttcggtctaagactgcaaagtttgtttcggaagtcgtgtcagtgaaaacggagaaccaaggctggaaaag ggcctcttggagcagacttgagaactaacaaaatcaacctaaggcgttgtcatgtgcggaatcgaaatcgaggcacatta tcgctggaatcaaaattgatactgatatttctgatttttttttgttcagttcatctgtcatccttacagtcagctagcat taaactcagaagtgtacaaaaacgtcccttatttggagaaaagttcttggaaacaggctgtgttactactttttgcggct gtcgcgtttcccttgttgttcttggtatggctggtggcggatctttgttgtcccaatcattcaatttccagaatgttcca ttcgccttgtgtcaagtttctgattacctgcggttcctatcagacatttcttgtcttgctcgctcttacgtcgttccatt cctctcagagtgacgaatttctggagtacagtgttgttggtatgtaaaatcttctccaaactaagttaggcagaatagat tgtaaaaaggtagaaccatatctccaaatctgaccccacaaaaggacagtaaaaaactctgacctgaccccctggtcaga aaatttccttgttcttatgtgggccatttgcatagctgtaacgtccaggtggatattgggaagtatggaactgcccttta acctctaacaatcttttccatctcgcggtttctagtgctacgcggcaaatttagtacccttttagtgttaatgaactaag ttagattgatgatttgatgatcatgccaaggcctaccgttttggtaacacgctttcccatgactcttctcgccttacaac aatgagggggacttgtggccggatcacgtggcagtatcgacagatttcttccaacaggcttgtcatctttgttcaggata aagatctttttatcagctaaaggaaagcgctattttaacgttttattaaccctttcccgtccaaggggttcccctttgac gagtaaaatcgtctggcgttagacagagtaaaatctataagtgccctgagcgctcattcggcagttaaggggttaatgcg ctattgcaatcttccacaacaggtgatcaaattttaatcaatgctaatttcatgaacttctgaattcttggtttatgttc ggtactactttctttaatcccacacagattggttggttctgttgtttgtaattggcttgcttgttgaagtcgtcaaagac atctaccaccaggggaaggatcgcttctgttctgacccatggaattatctatctttagcattagtgacgtcgtttgccat tcactatgccgtgtggtggtctggccgggcactgttggtggaaaaagttgattccttgacttggaagacacacaccaagg gtggctattcggttatactggcttcttattgcttctttgccgtggcaatcttatcatcatttacccggaatctttcgttt atccaagccagctcaatcacaggtccactacttcacgctttcactcagatgctggtagatgtcgcccggttctttctgta ttttgtctttttatttttggcgtttgccgtgagcttcaccaagctttatttacaatttgacaaggccagacgacattttc acgtcgacgcagaaacaacgaatcaaaccacggatcctttgcgtctggaaaggtaggctcatttgtcgctaatctctcta attctcgccagcgggtgagttacgggtatctcagttctttatcgttgcttgataccatgcatggagtacacgtacaaaga ggcagttttatgtacctctcttttaatgtagcagacatcttccatttgcttaacagatttgggaacagcatgaatacgat cttttggtcgctgtttggagagattaatgagagcggcttccaaatcgatgaagagggctatgaagcaatatggaagactg gaatggttctttttggtgtctttaacattgttgcagttcttgttgcactaaacatgttaatagcaatactcaatgaatct tatactcggatatcggtaagatcttgagtctagctctataaggttttgtaatgttttagcgcctgtcttatcttctctaa aacaacccgaggcaaccaacaaaaatctatgtacttcaggaaaataacaagtagttgagaaaggcaacatgaaaaaaaac gagacttgaaaataaactttgtcatatcatacatatttcgcgattattgatacttccatttcgtttacgttgtataaaca tcttactagcctcgttttctcggtacgtactgtaagctatgacattttgtttttccacttcattaaattgaaatggaaaa agtttattggcgaaattctctaacaggtttggtacaagcacataaaaaagctccctgattttagtttgtttttttgtttg aaaaatatctgatccgaggaatcatacattttattggccaaaatagactcttccttttgcggatatataaacctacattc gcaatgactttctgaccaacttcccgtctaaatctgtgaaatgaattttaaacaactgacaggaagacttggataccgag tggaagttcagcagaacaaagctgtggttgggctggatttacaagaaaggcgttcttcctcctccacttaatattcttta cattttcttacctgtccgttgggctgttgagcgtcttttcaccaaatttggcggcagaagagaagcctccgacgggaagg ttagtaacaacataactctgcctgcgaaattttcctttaagtgtatagcgttcggcgaacagcttacttctgggtattaa aaacaatcaaggtcatctccttaaccgtcctttgaagaattccatccagccacgttcatggagatgaaacattaactgga gaggcaaagagtatgccattcttcagaaataattttgcgaattttgagagattaagtttatgaagattattcaagttttg cgtttcagtatgtaaccaggcgctaatttgaagcttttctttccagtttgtcttccgtgtttcagcaaagcacaagcaaa aacccgccaggagatcaacgataaacgaaacggaggtaatataaaagaaaatgaaacaaacaaatttgaatagaactttc atgataatgtagtctttaagacgattaaaaacttgttttcttcccaatgctttagagacgagaggtgatccgcaatcttg tgctgaggtacctggccaattcttcttgccactcggagactgaaaccgagtcaagtgactcggaagacggaaacgaggct gagtcagcgttgtaaaacaacaatgcacctggagctgggaacgaataaaacaacttttacagt |
Protein
Protein ID | aug_v2a.11450.t1 |
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Definition | - |
>aug_v2a.11450.t1 MEATDIFLQELTVDGTDGQQENIKLQRKLFKATRKGDLERIKSLTHLKCEINCVNHSGKTLLQVAAELSDLSQRHEVIAA LLSSGADLEFGMLHAIRDNNVKTVQTLLSFYDTASSPHPRTQSKCQGHITPLILAAWLQHFRIVKLLLDHGFTISDVKWP RADFTGEAVEKLGPAVYRLNRYRALASPVYIALTFLQNVESGPDPVHRACVLNKELHDTADQEYEFSKEYLELSDNCKEF AVALLNECRSMKEIRCVMERASKCADVVLNTQGKCLNILEFAIATRNEKFICHPYSQLALNSEVYKNVPYLEKSSWKQAV LLLFAAVAFPLLFLVWLVADLCCPNHSISRMFHSPCVKFLITCGSYQTFLVLLALTSFHSSQSDEFLEYSVVDWLVLLFV IGLLVEVVKDIYHQGKDRFCSDPWNYLSLALVTSFAIHYAVWWSGRALLVEKVDSLTWKTHTKGGYSVILASYCFFAVAI LSSFTRNLSFIQASSITGPLLHAFTQMLVDVARFFLYFVFLFLAFAVSFTKLYLQFDKARRHFHVDAETTNQTTDPLRLE RFGNSMNTIFWSLFGEINESGFQIDEEGYEAIWKTGMVLFGVFNIVAVLVALNMLIAILNESYTRISEDLDTEWKFSRTK LWLGWIYKKGVLPPPLNILYIFLPVRWAVERLFTKFGGRREASDGKFVFRVSAKHKQKPARRSTINETERREVIRNLVLR YLANSSCHSETETESSDSEDGNEAESAL* |