Gene
Gene Model ID | aug_v2a.11473 |
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Locus | scaf4460 : 42616 ... 48987 : + |
To GenomeBrowser | scaf4460:42616..48987 |
Genes list of scaffold | scaf4460 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 1-9 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 1-1. This gene model contains Glycos_transf_1 domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.11473.t1 |
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Definition | - |
>aug_v2a.11473.t1 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggaaatggaagatgatgaccaacgcttccaccagcagtttatcaaa acggctggttctgccacacatctgctcttcaaccgtaggcaagtaaatgacataaaaaacttctgcacaactttcggcaa gagttcggttctttctgtcgacgtaacctttaatctgggaccattttgggcagtagtaacaacataccagaacctgatcc tgagacgtaaggcccaacaaaaccatccagtagtgattgggcccgtagctctagttaaagacaagactgaaaagtcttac agccacctttttaaagccctgatttcagaagaaccctcactttctcagtcgttaaaaggttgtggatcggatggcgaaat aaaccttgagaaggtgttggactccacctttcagcaagcataccgatttagatgtggcaatcatcttttcaacgacatac gagagaaagcaaggcagataggtcttcccagggccaccgtggaaagttccattgaagaactccgaaatgtctgcctgaca tcaacacgcgagtctggatccacaaacttaggaaatctgctagaaaagtggcgacagtgtgcagatgctgggtttaagga gccaatgacccgcttctgctcttatgtctcgcgttacatcatgccagtagttcgtgacagggtgatctcagaaaatgcac agcttgcaggctttccgcagttcagtaaagccctctatacacagaacgtgtcagagtctggtaacgccatgctgaagaac tggacagggttcaaagagagcgacgtcgactcctttatcttggatttgaaagaaatggtgatgagagaagaagatgacgt ggcaagagcccttgtgggtctggaatcgccttatgaagtgttagaagagtttcgtcccttcctttccaagagtgctgacc acctaatcaaccctgatctgtccgaacaggaaaggaaaagtagaaaggcaaagatgctaaacgcagacttttcagacgtg ttaagtaaagtagacggattccaaccacttggaacttacgataatcgagcgtcagtgaagggtgtcggagtagaagacaa agccatgctccagcttgatcgtctagcaggacttggattttcagagcccatgataaatggtatgaaaacaaaaacaaaca aattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcttttagcaaaaccccgtcattggctgatc gtcgtaacattggttctggaaggatcgagtccaacactatttactgtcgaggaatgccctgtgagaaactggatcaaaat tgaaggtgtgtgataattttgcagtacgatttcctatagatcttcatgtcagagaacatcggattaaaacgtttgactca tcatgcatcattggccctaagggcgtctttgctttcaggtagaaatttgattacttatccccttcccattggtggaaaag tagcagaaactgttcaagctactctacggagtatttgataaactttgattctgtaagtttttctggaaatactctctctg gaataacctccgacttcgtttgatttctcttctgtcatgcaccactgcccgcatcccccacccacaaattcagagatcga catatttggcgtctcgatgacgttcaccaatcatatttaggacttttcacaaaataaacggtgattaagtagtataattt tatctaaatttgttgcgagaacaaaaatccttgttacacaacaattcctatgcaatattaatgttatgcctgagtgccag tgtcatctttgtacggtattactccacttagtaaaatccaactagtggtctgttatcaatgctgcgttctgattggttga gctactactaggctatatgttatagtatattatcgctctgacgaagggctaatgctcgaaacgtcagctttctaaatctt tcatggtggtaattcaacctttatcaacttgtttgataaaaccaaatttttgttttgatctctcccaccaatgcagcacc acaatttctttagaaactagaaatccatgtgttatagtatattatagctttctaaatctttcacggtggtaattcaacct ttatcaactcgtttgataaaaccaaatttttgtatatgttatagtccactatagtaattatgtaaagagataaaaattat aagaaggggtagatttgagtaaaatcatgcatgttatgtctaggaataaaattagggacatatggacagtagaattgaag tcattgcgtaagtgaggtggggtcttcacagttgcgttataagtcaataattatttcaaaattgtgaatattgttgggat aaagacttaatgcttcttttttattcaccattcatagatttatttacatgttgtggatatttttggaactttggctgctc ctgtcctcaaagcacttacttgaaaagcacccattttgacctccaaaggattttttcagaactggtcaaattgcaaactt gtcactttactgttgcaggtttgttctcattggtgaaatgttgtcactagatgaagtatctgaacaagcagatgcagtga gggaaatattaaacattactctgctagcaagtgaatggaagtcatcagctggtggtatgtcaacattaaatagggagctt gcaattcatctggcacagatgcaaagtgtgcgagtttcactgttggtcccagagggtgcttgtagtgatgaagacaaaag ggaggctggaagttttcgcatcagtattcttgatgcaaagaaatgtgtgggtgttgatcctcttctttggttgagctacc cacctcgaggtcacaaaatagatgttattgttggacatggtgtgaaacttggttgtcaggtgcaactcatcaaaagacat ccaaactatgaaaattgcaaatgggtacatgtggtccatactgcaccagaagacctcagcaaatataaggattatagtaa tccaaattcaaaaggtgaagagaagcagtgggatgaggttgatctttgtaagagtgctgaccttgttgttccagtgggat caaagcttgataaagcttatcatgggtatttgcagtcaagtaaagaaagtggggacttctttgagctcattcctggcctt tttgagcgcgagtttggagatttggttgaaaagcaggagcccaaagatgagagggatgattttattgtgttgttgtgtgg gcgtggtgataaggaggattttgaagttaaagggtacaacattgctgtcaaagcctttgctgatcagcgactggagggaa aacgttactctttgctttttgtgggttcacctaaaggagagcaagatgaggtcagggaaaggctgctcaattgtggaatt gataagaaacagctgacagtgagagagtttgtaaagagcagagaaaaaatgaaagatcttttctgtgaagtggacatggt catcatgccttcaaaatcagagggatttggccttgttgcccttgaaggcctgtcagctggtttacccattcttgttggga gtaactctggatttgcaagagcaatagaggacattccatcgggattatacagcatagttgattcagaagatccagctaca tgggctgcacagattcagggtgttcgtgatagacatagagtggtccttgaagaaaagaaaattctgaaagaatgttacag caagaagaacagttggaaaacacaacgcaaagaactcgttggcagattatggaagatggtttatggtaaagtatcacctt tggtttgcttttgttcagctaattgttctgactgtgggagaatcgagtccttttttacaaaaggagaggttgatcctctt tgtgacaaccaaatctccctttacaacgttgtagcaaggtactttgttgaaaacatgcacagtgtgaagaacttgttgtc agattaaattggtggttggtgatagttgtgttttatttactgtttctagctattcttttccaaacagtttttctctacat tgtatgaaagtactgacttatgcaaagataagaatgagtatcttgcccaaagattaatttttctcaagctttcaagtgca tacctaatttacctaatacagtccattgcctttgcatgtgttccccaaagtggtatcactatagcacttcttattgtttg cctttaagcagcctatatatttgctggattaaaatccttatggattggatttctcaagatttattatttactgtattaat aatatatgccttatagttatgattatagaaatttgcattgtagaactgtaacaccaaaagttataattcaaatcaatgaa aattcaattggttaagaagaacaacttgcagcattcagtcagtgaataaaagctatggctgataaaaagttggggccatc caagacaaatcaagctaatcatgaatggtcagagctggattttaactgaacgcaactgcatgcaagttccaaagccatca ccactaaagagcatgtcttagatcatggttgactttgattgttatgatgattgaatcaataataataatattattgtgat aaataaagagattaaattcattggtgcaggaatcacaacccaccattagtttttattttctttcttgttcatctgccata cacttgttgcctaataccatgataatatctttttctattctttaaacaaaatcgatactcaaaagttacaatcctaagaa ttttgtttaatgactgcttgttgttctaatttggccacttttccaggggtctctactgctcaatctgtagcagcagatga ttgggaagaaaaacaaccaagggcaatctcagaataattttatccacctgatcaaagaacatttcaacaggatatcgagg atgatgcaagtgtagcgtagggcctgagcccgacttagttcggacatgcgctgtggctcagtgtacaacgtgcttgtagt agatttgcaagttgtgttcgtgtctgatgacagataaagcgtttttgagaat |
Protein
Protein ID | aug_v2a.11473.t1 |
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Definition | - |
>aug_v2a.11473.t1 MEDDDQRFHQQFIKTAGSATHLLFNRRQVNDIKNFCTTFGKSSVLSVDVTFNLGPFWAVVTTYQNLILRRKAQQNHPVVI GPVALVKDKTEKSYSHLFKALISEEPSLSQSLKGCGSDGEINLEKVLDSTFQQAYRFRCGNHLFNDIREKARQIGLPRAT VESSIEELRNVCLTSTRESGSTNLGNLLEKWRQCADAGFKEPMTRFCSYVSRYIMPVVRDRVISENAQLAGFPQFSKALY TQNVSESGNAMLKNWTGFKESDVDSFILDLKEMVMREEDDVARALVGLESPYEVLEEFRPFLSKSADHLINPDLSEQERK SRKAKMLNADFSDVLSKVDGFQPLGTYDNRASVKGVGVEDKAMLQLDRLAGLGFSEPMINDEVSEQADAVREILNITLLA SEWKSSAGGMSTLNRELAIHLAQMQSVRVSLLVPEGACSDEDKREAGSFRISILDAKKCVGVDPLLWLSYPPRGHKIDVI VGHGVKLGCQVQLIKRHPNYENCKWVHVVHTAPEDLSKYKDYSNPNSKGEEKQWDEVDLCKSADLVVPVGSKLDKAYHGY LQSSKESGDFFELIPGLFEREFGDLVEKQEPKDERDDFIVLLCGRGDKEDFEVKGYNIAVKAFADQRLEGKRYSLLFVGS PKGEQDEVRERLLNCGIDKKQLTVREFVKSREKMKDLFCEVDMVIMPSKSEGFGLVALEGLSAGLPILVGSNSGFARAIE DIPSGLYSIVDSEDPATWAAQIQGVRDRHRVVLEEKKILKECYSKKNSWKTQRKELVGRLWKMVYGVSTAQSVAADDWEE KQPRAISE* |