Gene
Gene Model ID | aug_v2a.11669 |
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Locus | scaf4579 : 2641 ... 8840 : + |
To GenomeBrowser | scaf4579:2641..8840 |
Genes list of scaffold | scaf4579 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-alpha-tubulin6 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapience alpha tubulin (AAA91576). This is an axoneme related protein. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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tubulin alpha-1c chain- partial | GO:0003924 GO:0005200 GO:0005525 GO:0005634 GO:0005881 GO:0007017 GO:0008152 GO:0019904 GO:0036464 GO:0043209 GO:0051258 GO:0055037 GO:0070062 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.11669.t1 | gi|733927922|ref|XP_010724891.1| | PREDICTED: tubulin alpha-4A chain-like, partial [Meleagris gallopavo] | 0.0 |
aug_v2a.11669.t1 | gi|348545947|ref|XP_003460440.1| | PREDICTED: tubulin alpha-1C chain-like, partial [Oreochromis niloticus] | 0.0 |
aug_v2a.11669.t1 | gi|560961509|ref|XP_006203198.1| | PREDICTED: tubulin alpha-1B chain, partial [Vicugna pacos] | 0.0 |
aug_v2a.11669.t1 | gi|202223|gb|AAA40506.1| | alpha-tubulin, partial [Mus musculus] | 0.0 |
aug_v2a.11669.t1 | gi|548962030|ref|NP_001271765.1| | uncharacterized protein LOC101925047 [Macaca fascicularis] | 0.0 |
Transcript
Transcript ID | aug_v2a.11669.t1 |
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Definition | - |
>aug_v2a.11669.t1 accaacttggtgccttatccacgtattcatttcccattggctacttatgctcccgttatcgctgccgagatagcctacca tgaacagcttgcagttgctgaaatcaccaaatcctgctttgagccacccaatcagatggtaaaatgtgacctacgccttg gcaaatacatggcttgctgtctgttgttccgtggagatgtggtaccaaaggatgtgaatgcagccattgccacaatcaag accattcagttcgtggatttgtgcccaactggattcaaggtatttgctaacttgatgtcttttaaaatatgaaatgattg tggagaacaaaacgatgggtgacttagctaatctcattatctggtttctcagattggtcaatttaagctattatatatgt ttttcaggttggaatcaactaccagcccaccacggttattcctggcggtgacttggccaagattcagcgtggcgtgtgta tgttgagcagcaccacagatatcgctgaggcctgggctcgccttgatcataaatttgacctgatgtatgccaagcgtgcg tttgtccattagcatgttggcgagggaatggtagaaggagaattttccgaggctcgtgaaggtttggctgcgctggagaa ggactatgaagaagttggcgtcgattctgttgatgcagaaggagaggaagaagaaggagacgaatactaagtcaactcaa ttcccctcacggatcattttgtgctgaaccgcggcagtgatactgtagtgaaataaagtctctgctgccttgcttaatcg tagaagaacccgatttgcccaattttgtgagtttaactgattttttctggtttgtcggtgcagacgaagagaaaggcaac acataaaaaatatatatatttctgtctaggggaggactggggaatgcatctcgaagtccgcgtgactgatgtgacaggtc gatatatagggaggaagggcgatggaatgccagattcccgtggaatcagagagtaaatattcattgattgcgataaatgg aaacacggttctaatgcagactgaattgagattcttttaggacaaccggtcgttctggagacttgaaattgtacgtgccc tccacagatacgaatgacatcatcgctgagcgtacacgcatggttgcgaggtacgtgcggacgggatggtttcgtttctc gatcgttctctcgggtagtcacgtcttttcaaaccttaaaatagaaaactccaagtaatactactctagactaggaaaat accaaacaaataacacaaccaaagacagccatgatataaaacgccgtgtcgactttcaaatgcaaaagtgtgatcaattg ctattttgaacacatccaacccacaaatactcgaacgcactatctaatctacgattactaccggtgggtgcaatattctt ttacccgtccacaggaatgtttaggcttatctacctttagaaccctggcgaatgtacgaacactatttttgtggtacaag gatgaagtcaacgacgggttgatgctaataaatccgctagatactcgaggggtgagcttgaaaacgtttcgcgttttcgt cgatcataacatctcagaccctgtctaaatgcattcgttctgtttcttttcttttcttttatccgaatgtgaatgaaaat taaaccttcggttagccaacctcgttcccagggtctttcatctccccaccccaaggggagcgagggaagttggggtggga agatgaaagaccctgcgaacgaggttgtcggttagagtgtcttgtccctccctgcgttcttttatcacgagccctcaaag actcaaagtcaccgtgttcaaaaacctccattgttattcttccacaccaatacgcgaagtatccgttttccaactattca ggaaacgtgcttacggaacgggctgtcctatttttgagcgatatcggaaagtgtcaaggtcaaactgccatggtagcatc caaaacagtgtgcactaggctgaacaaatttgacagctttttaattaaaaaaattcgtcatgacgaagggcttgtgctct gaatgtcagcttttttgttacgaaagtaatttgaccaattatttgaagtcgaattttcgttttcatgaaaaaagcctcgg ccctcgttaactttagccaagatttcagccgctttctccgctcaatagtcactcggggagagagattagggagttttagc aatgatgacggagacagcaagaaaaacgtcacttaaaaataaacacttgcctaactgtgactattttgcggttatcccat cttgttcgcattttacaatgttaacaaagaaccctgcaactggattaatctgagaactgtcaaagtaaatacacagaact aaaaattaacggttgtatgctcaagtattcatcaaaacggtaaatttggtaatttcacgttgttgttttgcagaggacgg cacggacttgttcataagagcgtgtcgcacgtgaagcacgattatttttccacactcgaccaatcaaattcttagtttat ggcgttgtcgttgccgttcccgtcgttgatgctaaaactccctattgttaagaagcgaaggaggcggctgaaattcagcc tacttttagttgtctaattatgatctagttccaccaaaactggagttatttttttaatgtctaaagactagcggaggcta aggattatatgtttcttctaacatgtgagaaatcgttgaagaagagagtgttttctcattttatcttgttttaacatttg tcaaaggatgtgacacacgacaagaagttcttacgcgtgttcttacgtctccctgtcctaacacagctgtttaacaagcg ggagttaataattaggtttttgtatttaggtttcatacctacacgtgcgaagtaacatttacttgaaatccgtgagccat gccatgagcagtcacgctcatggcatgggaggtaacaaaaagttctgaaatttaccgagctttttatgaagtgtacttta attgggtagaaatggattgcgccatgagactgcagataattatctctgaattatcatctcttggttacgctcataattcg cgtcctagttaccgtgtgcagccggtagaagatagattttctaggaatcaaaaatggggggtttaggttgaagtgaagtg gatagttttccgagaaagtcagtcaccttactttatgaaatttagtggtcatgttttagctgataacagtctctcgcctc agtcttcaaaaggaagaattgaccaacatgattatgatgaccgctgaacattcatcgagatacatttttcaagcatgata aagtgatgaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngggttagggttagacctgcta atcaccctttctcgcagtccgtagactgaattgcaaagggcgcagctcaacgaggtcggaccgaaggagctgccggttag gcgctctgcccctgaacacgatccatatatgacttcggagcacagcaccacagccagatggattagattgggagtcannn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnntttgtagtagagggggaggtgtgattgatgtccactacgccagcctgacttcccaaaatgtgctaaagaggatcaaa taaaaatatataagaaaggagaagaagtttaccaattaacatgaaatgagcacttttttggctaataattataccgattg tcaaaacattcaagccgtttttcatttgctaattttctctaaatcttgtcattattatagaagggcgctgttggaataga tcatttaaaattgtcctattcacttaaaaaacgttctcttaaagagtatctcattgagtcgaattgaaaagaaggttcat tgcttcaaatgcaattaaaagttgataggtatgaacggtttctgaggaaaacagagactgaatgaaaaattatgttgttt cgtgaatcgagcaacagagaaagggcccggaagcactaggcaatttttgtgtattttgccaaaaaatttgttatcatttc cgtgatacaagtgcgcccaaattttgtcaagcattaccaaacttcacaggcgccgccgtcctgctttggagcaggacaaa tttttgtcaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttacgtttt caaccaatggtctttggttgatttgagaagtaaaaatacaatcaatattgggggcggcttctttcctttcttttgtaaca ttcgtgcgcgatcggacttgtggctgagaaaggaagttttcctcattggcatagcctaaaagttatttgttcatatatga aggaaaaacaaacaaataatacatagcaagccaatacgtgcccaaagtgctagcaattggtctattattataattttgtg gtcacctgtttcacgcaaatgtaaactgcaaatcaataacgacgaaattggaagcaaagaggaaaggggcgttagatagc gaaattcctctcaagaattcttccacattaagctgtgagggaaacgagttgagtaatcacttgaaaaatttaattggtgt tactctttccagatgttgcagtttttgttattgttgcttgaactcctgtgcacttcaggacaaggaaaagaaagtcaatg tttatggccaccagattctggtatgtactatctgaccagtagtggacatggcgtttaagatgttttttttttttcaaaaa aagagatggaacctctttcctcgattttcatggacgtcgctttcgacacatcaaaagatgcaaatccatatttctcggca ttttttgtcattattcctccttgatcaacttatacttaactaagaatcaggaaactgaagaaacagtataggttttgaaa ggaaaaaacattttgctatgtgtgtttgtttgcaaacgacgagatagcagaaaatgaaagaagtttactggacttcaaaa cgcacgcgcaaagttgtaatttttgtgtcataacatggatagccacagtgaaattttttctgacgtcattgttgactttt tatttcagaaacaaacaaacatgattcttaagtgtgtctttttgcaagttaaaagaacttatttgaactgcctcttcagt ttcacgccttaagatgtgttagtcggggagacgtttacggccaataactgctttcgtttcagaatcaaattttagaggtg gtttgttttacgatgaactttcaattttaagggcttatttctcggaggactgattagtagacaataagtcaaaatttgct tgattcccccagattgcatagtactaagtaaggaagttatacgacttatatcttactgtgtgtgtgtacttgcccccagg ttatcccataatatgttttgctgtaaaacacttcattttctctcgtcagctctaccagagccatcgggtttctatccctt gacgtcagctactgcagccaatgattccagtttatatgaaaatccacctggcgttgttaagaatgcctaccccggcctgg gtgtgtgtggagagaatggcgggtcatacagcttcacggggtctcgctctcatccaagttatatcaagttatctaaatcg gagtttcttgataccaggtaactagcttttcagaacttttcgaaaaagttattccttacatttggttttgaccgacgtcc ataattaaacccacgccacatttatttgatgcaagattgtgctatgactaccgcaccattaatttcacattttctccaag ttaacactaatggaccttgaaagaaacgatcactcaatta |
Protein
Protein ID | aug_v2a.11669.t1 |
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Definition | - |
>aug_v2a.11669.t1 TNLVPYPRIHFPLATYAPVIAAEIAYHEQLAVAEITKSCFEPPNQMVKCDLRLGKYMACCLLFRGDVVPKDVNAAIATIK TIQFVDLCPTGFKVGINYQPTTVIPGGDLAKIQRGVCMLSSTTDIAEAWARLDHKFDLITLANVRTLFLWYKDEVNDGLM LINPLDTRGMLQFLLLLLELLCTSGQGKESQCLWPPDSALPEPSGFYPLTSATAANDSSLYENPPGVVKNAYPGLGVCGE NGGSYSFTGSRSHPSYIKLSKSEFLDTR* |