Gene
Gene Model ID | aug_v2a.12120 |
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Locus | scaf4780 : 4262 ... 13189 : + |
To GenomeBrowser | scaf4780:4262..13189 |
Genes list of scaffold | scaf4780 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 2-12 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 2-1. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12120.t1 | gi|558194016|ref|XP_006129955.1| | PREDICTED: uncharacterized protein LOC102448109 [Pelodiscus sinensis] | 5.0e-29 |
aug_v2a.12120.t1 | gi|551531911|ref|XP_005817402.1| | PREDICTED: uncharacterized protein LOC102226628, partial [Xiphophorus maculatus] | 2.0e-27 |
Transcript
Transcript ID | aug_v2a.12120.t1 |
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Definition | - |
>aug_v2a.12120.t1 cgcattttttttgactgacccagtttgaggttgttccaacaagactctattgcttgtgtatggaaccccatttctggaac gagaaagtgacgtgtatgcaccacaaatctgtggtcagcaatgttgttaatctggaccattatgcctctataggccgccc agttatccgtgtatcccactgtcccaggccggatgcttcagccgatgatgggatcaagggtgacaatctcacattgatcg aaaacttagaagtgatctcctgccggggtgaattctgttgttgagcaggaactgtctcgcaagaaaaccgaaactaattg accactttcataaatggcggtgtatttatgttaattagacctactcgcctcactttggtttaaatattctttagaatttt acccttggcagtgaggctaatagggcttattagcatcaaaacaaaagagtattaaaatttaatactcttttaatttaatt tcatcgccattatgaaagaggtctatgcttttcaaactagaaaaagcaggacgcctagatatgaaaatttacacaagtac agatgtactaaagctagcattgaatatccaagtgaagatcgacaagttcacgcaattactgtcaaagtgactcttatccc agtgtactctatgcctcaaaagggggaagtgggaaagggacaaaaagaaatacactcactgttagaaattacaaacgaag agcacgaagaaagaatttacgacaaaaaaacatctggagatcgagactatagagtcatgcaagaaacacatcaaacacct ctcagacacacacagcagatcaacttactctctcgaggtttgaaatccaatccaacacctatcatgaaagaaaaccagat aaggtgccatctacttttagacttcaaccaatttgctagatggatgtgccttgaatatatttatcatgaccaaaatactg agcaacatccattccacgtgaaatccagttggattccaccgattcaacggtcagttcctcttacttagaaaaagtcaaag taaaccttgcagaaactccactggttaaacctaaaaataatctgccacccagcaagcaacgagctctcaaggagctcatt aacaacaaagaaattattctcaaaaaagcagataaaggcacaacaaccaccgttatgaacagagaaaacaaaaacaatga gggacagatacaaataactatcagccactagacaaccaaaccaaacacaagatccacctcgaattccagtattctttgcc ctaacgaaaattcggaagacctataatatctgggtgtgatggcccaacagaatgcctatcatcattcgtagacaaactac ttcagccaatagcacaaatacaggaatcgtatcttaagatacaacacatttcataaggtttattgagagcactagggtgc ctagaaatgcgtttctagtctcaatggatgtcacaagcttttacgcaaatatcccacgggnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnatgaggaatatgtttccatttttctttttggccacttctaaagggtggttttttgtatccagcac ggtactgttgcttagtttattcccacattaatgcattatctgatgtccagttagtgaccaattcaggtaaatggaggtga ttttgttcagcagactgactaacgtgcccttaataaactattttcaaattgaagtctcgtgttagtgtagtcagaacgag gggtactgtcggaatagtgttgcttataatacatagaatattgttagtgtttttgttcagataaagataaactgacaaaa aacttataccaaagtaattacttggattaatcacagtgaatgcaaatattgtgatagccaatcagaattacaataattat tgctctatgattgataaaataattgaaatgctttcatcttctaaatttgcaccaaagtcaaaaagtctttataatgaaga aattaataaatttgttaatggttaaattgcttcactttgcgaggcagaaaaaaacctttccttcctgacgaaccatgcaa gggccttaaaggcctatgcagaacacacgaagaatgtaagtgtaacaagtttttataaattacagcattcaagtgttgtc acaccaaggtatgtaattgttgaatagttgatttgtcatgattatgcttcttgtaagcctttggaatttgctggtacgtg atgagttaaaggtggtccctcttcaattggccatgtctagtaatttttggtttgtcttttatgggtggtcttccttgagt gtatcacatctagtagtattacagtgcgattcaaagtccgatagagcaatgaaaccttattataaataagtgtgtatgac tagtggttagttagttagttggggtaaggctggaagtaaccacaagagttgtaagatgaagcaaatacaagacatattag catcacagtgccagtgttgttttagagtctcggtacctttcgctaaggcaagcaaggcccaacaaaattggtggagaatc cgggtaaagcaagacacgccccggaagataaaggagcaagcatttggggacaacgaacttgtaagtgaagattatcttct tcgaaccatacatgaaccagtcattgcaatctcgtttagagttctctggatgaactgaacacagtattgttacgatgatt tattactaagtagcgaagtagtcatgcgatatttgtgctaagaagttgaaactatcttttccagtctattagtgagtgtt ttttttttgttcgggttatgcgatttggcttttgaaagtgtcttgggtttcagccctgattactaggagtaaggcacgcg cgctggcggcgcagggtcatgcggaaagtggagagggcttgccagattctccttcagcggtcgcgtggccaagcctgccc gccctgccagccccagcgcaacagcccaataattctagatttcagggtgtgcttcgttccttcagaaaagtaattcaccc gttgcgacgcggatctcacgatagcgctactcgtcgagaacatcctagtttcaagtcagttgagagtttgccacccccac cgttagagcaattagccgaaacaaacatccgagttagtggaaacgcaattccgcgtcagcccaattttacacagataaat gatttgccttctgcacagtcactgcgcccacctttgcctgtgagacacatccctcctggtcttttggatccgttagaaga ctcagagcttagtgagcttccaagttcatctgatagcgaggaaagttcgttaccatcgcttcgagttagtttaacatcgg aaccggtttcgaataattcagcatgtcgaaatatctcgggacccgatagagtttttaaccagtcttctgaaagcaagttc gttatcacagatcacgtacccatgtctcgccaagaacgagcggatgattcggtcgcacagatctgcgacgccattcgtag tatggcagttcaagaaaacccgcggtcaaagttagtagttagttttccagtatttcgtggcgacgagagtgaggatgtgt ttgatttcttggataatttcaaatgagcagccaccctaaatggttggtcaaacgaggatttggcagtaggtttgcctttg tatcttaaaggccatgctagcacttggtttaaatcactgggaaacgtagatggcaaaacttttaaccaatcgaaagccct gatgacagagcattttgcaagcggagcaagcgcttggcgcataagacaaaccttaggtcaacgccgccaattggaaaagg aacccgtttccgaatattcctatagtgttcgtatgcattgtgctaggttaaatttgccaacatctgagtggactcattac ttcgttcaaggtctaaaacccgagattcgcgaatatgttattttacaacaacccgaaaattatgaggttgcagaaaatta agcaaaactcaaagagtctgttttggcaagttctgataagcctcaagcattcgacccaaaacaaatgtcatctcaaattg tggctaagctgagcagggtaatttccccaggaaatgagactattggcgcaatgggtagtcagcagacaaattttcatgac gcacattttaaaagaatggcgagagatgaatttcacccccttacacaaaatagtagaccctcagggaatgagtttcgacg acgtaggaattttggggcccagacaagttttcgtccacgtgcaacttatcgtgtctgttacaattgtggccggaaaggac atttacattattattgcaatgagaaacctgacccaagggttccacgacaaaacaattcccatcgaggcagtaatttttat gggcaacaaaatcgattaagtggcagcagttttggtgaaactagatgttggcaaatagagctgtgatgggggcgaattca aatgagaaaatttgtagtcagatttcaccagcggatgcgagtttagtcgataaaaaagccttcgtcccgacttgttctgc tgaccgaactgaagctagttgtagttttgaacctggtgagaagcaatcaccaccgtctgatgatttatcaaaacaaattg cctgcctttcgaggagcgttttagctgtgttcatcctcttactgagtattattaccagtttgctgaaattggttcaattt attttgggagaatttgtcgaaacagttgaaaaaccgcgaccgccaaaacaaccctcaagctgtgacgttgaagagtcatt acaggtgtccgactcttgcggaaacgataaagtggcacgtgtgaacgttcagtcagttgaagttgatcctcaagattttc aagtggtccaagagaaacaaattaaggtagagacagcaacaaattatcatgtgttttccggtgaagacgcaacagtctcg aactcgagtcctttagattctaatgaggaattaattgttctgtcacccgagattgtcaaatcgactgaagtcaccactca aagtgagagagcgaaagttgacccacagtctagtgattgtgcttatcagaagcgaaacattggtacgtctattaggtcaa tggacagcgtgacttttcagttgaagtctagtgattttactgtttcagtaggtattgcaaatttcaaatttcaagctttg ttagacacaggcgctgccgttactgcagtgagtgcgcgcatttggagggaatatttaattgttttcaccctaatctgaat ccgcccgctcgcggtgctgtcacaacagtagatggccgtgaactagtcacgttgggaacgctagttttgacttttgaaat tggtgctgattcttttcctgtgaacgctcatgtgatagaaggactggcttttgatgtgattattggaagggattttctca aagagttttgctccggaatcgatttcatgaataacgaagttgaatttgtacacgctgacgatccgcttccctttgatttt agtgaccttcatgatgaccccgatgtagatgattcagaatttgttagttctgtgcatgccgactattctttcacgatatc gacgcgatctgaaaagattgtccttggcaaattgaaaactaagccggcgaatggacagactggagacacttgtgccatag ttataccaagatctaacctgcctcaccgttattccattttcggtgcagcagagattgttaaggtttcagagaacggtaca attccgatcagattagtcaatccgtctgccgaaccagttaaggtattccgcgagactataggctaggcgatttttcaagc gtcggagatgaagttgagacatttgagttgaatgaatttccccaggaagtcttgcctgcgatgtctgagggtcaaatgaa aaacgaattgcctcatcatgattattcagatttacctgatttgtcagacagcattttgaacgatgatgatagaattaact tccgtgagttatttcggtgctaccgtgatgttttttgttttactcgtgaccaacttggtgaaacttctctcgtccaacac gtgatcgacacaggtgatgctatgcctattaagcaaaggccatatcaaaccagtcctcgttgtaaacaagaaattgatcg tcaggtggatgacatgctccaaaaaggaataattagggaatccgtctcttcttggagttcaccggtagttctcannnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatgtagaacattggtgtaagtagtgtg ttgattgtgcaatgaaaaagtcaccaaggaacaccaaaagagccccgcttttaccactgcctgtcgaaggtgctttcaat agagtcgccatcgatgttttaggtccgttcaaaccatccagcagactgaaccggtacatcgtagtttttagtgattactt gacgcgttggtgtgaagcatttcaagtttctagtgtagaagcttttgtgatcgcgcgtttgttagtcgatgaaattattg caaggcatggtgccccaagagttttgctttcagatagaggaaccaacttcctatctaggcttgtagtggaagtgtgcaaa atttttcaaattcagaaagtaaacacatctagttatcacccaaaaacagacggacttgtggagaggtttaattcaaccct ttgccaatcactttcaatgtacgtagccaagaaccagaaagattgggacgatttcatcccgctaattttatttgcgcatc gaacttcaatttcagaagctgtaggcgattccccaatctactgtttgtatggtcgtgagccacgccttcccattgatgtt aaatttctgccaccagctgccgacgacctctcgacttcagttttagatcatcgcaagcgcattgtcgaaaaagtggaatt agctcagaatctagcttgtgaaaatatacagcgttcacagcagaaaatgaaagaatactacgatcataatgaaagtcaac cgctttttgaaatcggacaacgtgtttgggtttacacgccaaaaacaaagaagggtctatcaaagaagttgttgtataat tggtttggtccatatagaattgttgagcagtcgtctcccattcattaccatttgcgttctaaaagtaacaagaaggttac tttcactgtccatgctaatcgaatgaagccttttgtcgattctgctttgagaccaatcaaaccaccgagtaacgatgacc ccagtgagccgtatttagatgagtcagacattcctgcagactctttcgaatctagcaagtcgcatagccataacagcgac acaagcgtcacaattgaaaataacacgcgtacgcaaatcagttcgcaagggcagcccgatgccccagatcaacgaaagga caataatcaggtcgtaattgacaatcaaacgatatttgcccctgagaaaattctcaaacgtcgcatgagaaagggtaaag ttcaattcaaaggtcaaatggcttaattatcctataagtcagtcaacc |
Protein
Protein ID | aug_v2a.12120.t1 |
---|---|
Definition | - |
>aug_v2a.12120.t1 MEPHFWNEKVTCMHHKSVVSNVVNLDHYASIGRPVIRVSHCPRPDASADDGIKALITRSKARALAAQGHAESGEGLPDSP SAVAWPSLPALPAPAQQPNNSRFQGVLRSFRKVIHPLRRGSHDSATRREHPSFKSVESLPPPPLEQLAETNIRVSGNAIP RQPNFTQINDLPSAQSLRPPLPVRHIPPGLLDPLEDSELSELPSSSDSEESSLPSLRVSLTSEPVSNNSACRNISGPDRV FNQSSESKFVITDHVPMSRQERADDSVAQICDAIRSMAVQENPRSKLVVSFPVFRGDETDASLVDKKAFVPTCSADRTEA SCSFEPGEKQSPPSDDLSKQIACLSRSVLAVFILLLSIITSLLKLVQFILGEFVETVEKPRPPKQPSSCDVEESLQVSDS CGNDKVARVNVQSVEVDPQDFQVVQEKQIKVETATNYHVFSGEDATVSNSSPLDSNEELIVLSPEIVKSTEVTTQSERAK VDPQSSDCAYQKRNIEGLAFDVIIGRDFLKEFCSGIDFMNNEVEFVHADDPLPFDFSDLHDDPDVDDSEFVSSVHADYSF TISTRSEKIVLGKLKTKPANGQTGDTCAIVIPRSNLPHRYSIFGAAEIVKVSENGTIPIRLVNPSAEPVKKVNTSSYHPK TDGLVERFNSTLCQSLSMYVAKNQKDWDDFIPLILFAHRTSISEAVGDSPIYCLYGREPRLPIDVKFLPPAADDLSTSVL DHRKRIVEKVELAQNLACENIQRSQQKMKEYYDHNESQPLFEIGQRVWVYTPKTKKGLSKKLLYNWFGPYRIVEQSSPIH YHLRSKSNKKVTFTVHANRMKPFVDSALRPIKPPSNDDPSEPYLDESDIPADSFESSKSHSHNSDTSVTIENNTRTQISS QGQPDAPDQRKDNNQVVIDNQTIFAPEKILKRRMRKGKVQFKGQMA* |