Gene
Gene Model ID | aug_v2a.12502 |
---|---|
Locus | scaf4966 : 77806 ... 89792 : + |
To GenomeBrowser | scaf4966:77806..89792 |
Genes list of scaffold | scaf4966 |
Manual annotation
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12502.t1 | gi|260790535|ref|XP_002590297.1| | hypothetical protein BRAFLDRAFT_76550 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | aug_v2a.12502.t1 |
---|---|
Definition | - |
>aug_v2a.12502.t1 gaaatcacaaaagctaaattttgcccactcttcgcctattttgaccatgaaacaagtacagtctgagcttccagtcgtgt ttgtttcggttgatgaaaggtgatggaagattttatgccaggtaggtcacttcacgagaagagtactagttgtgggagaa aggaaactcgaggccattaagctacagtaggttttagtttagtctcctctagttcctgagtggaagagcatacggtgaac gactaatcggaattttgtggattcatttcagatgttacgagcactcggattttcagtttccgtcgaagatttacacctct atatgtctgcttctccgactttcagactgtccatatgattgtttacactgtaaggacaacgaaagattatgtctcatact tattattttcttcaaacttgtatcataacagtacactgcgtcctattattaacacggatcaaaagagtttgacaggttat tttatcatgacgtttcacataaaaatgcggcgtccgagaactgttcacatcttctcaatcgagtgctgttgatttcaaaa ccagaccatattttactgacaactgatttttcccaaaggagggatcccacataatgnnnnnagcctctctatgggtattt acgaagaaatcgaagacgcaaagatcaacgagagaaaaaacgaagatctcaagaataaagcgaagatctgaaaatgtcat tagtatcatatgacgtcatgttggccttgtcgctgattttcaacctcgcgttccgcagaatacaattgaggcattagaaa aaggagaaatgaggacatggtgtattactgacatgactaaaaaggtgagagcgaagaataaccctcatttcaagtcagtc ttcaaatgtcgtaaatagcagaacgtcaccaaagaacctaacaatcctttattttttcaataactgtttatgttgctttt cgtgatttcaagctgtgagttatgcaatttgctattcaagtgaaatatttatcaaccgtgaataacactgaataaacatt aaaccatttcaatcctaaaaacgaagatcttctttaaaaagaaacgaagatttgccaaaaatcgcgaagaaaacgaagac cgtgggtacccatagcgaggctcacacaattccgtaaaaagagtgccgacttgtagcagataaatatacttcgagtggtg tcaccgtttgtattcgcttttcgcctctcaggaaaatcgcagataaaaatgattgtttttttttctttttttgacacgtg gaattctaattttcagttcaaaatttgtatgtgattatgtatgtgtataatttgtatatgattttgtatgtgaaaatttg tatgtgattgtatgtgattattataaaaagtgaaaagcccaccattagttaattcgttatctgtaaatcaaatcacaaaa gagtgagcaattaaatgcatggaatatcgttaatttctcagttatctatacagtatgaacaattttcaaaaagtacacag tataatgcttttctcgctggttcgggttattggcactttcttgatttttcagacgaaacaagcaaacgaagttacattat tacattattatgcaaatttcagtgttttctttaacaattccgcagtgcatagacagttagaatttcctcgcaaccgccat cgtgataccattactaattgtcgcttattaaactaactgatttcacgttgattatactctcttaaccactgaaatactaa tgtttctaccggaagcggattgtattcgatctttttactgatataatgacagcaatcatccaggtcctttgtgttaatca atccaagtggaaaacgcgaaaaagttcaagctatgatctttgtgaaactcgactggattactaatgaaagagctgtgtgg tgattgatctcagatatttgcttcgtttctccaagctagagaacttgtaacaaaggaggcaatacacggatcattcaaag tttgccatgaagtattcgcaacttactatcccttgtagtgaaaacctgcgcttcttcgcgctgttaattgtaagttggac cattttggttcatatctctgcaatcgagagtctaaaaaatgacgatgaacatgaaacaagaggagagttgtcaaggttga tccgcgaacgcagagcagttaaggaaaacggcacaacaaatcaacaggacattgaaaaacgacttaaaatccttgaaaac aggtatgtctagcgacaattgaaaagcaaaatgcatacagagcgtatttcagaggcaaagaacatgctgaaatgactgnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnccgaattgtgcgacacacaagcgaatcctgtcagaatcccggaacttgacacatgccc tgctgtaaggtttaatccatttgagatgttgctggtacaaaagttcaacgaaattttattatttatttagaaaacaatta caacatattgagaatttgtctgaaattatgcaatattttcaaaattgaaggagagcggttcagttaaaaaaaaacaaaaa acaaagcgcaggcatatgacttcataccaagttgcactccactcagtttaattactgattagtttttcaggaccgtggca ctcattttcaaatcacatatgccagtgcaggcaagccatagaatgacatcagcgagtactatttcaatttttgaactgtt catataattagattccaaggagcaccagtggttttgtaatgagatattcatgaaggtttctgataatacagacgctgaga gaaatgattgtttcattgactataaaactagctggatctttgtgcgtcttttcttcaatcacacagggcagaaatcccaa gacaatggaaattcaaacaagggaccccctggtccacctggaccaccagggatacgtggcccaaaaggtaaacaattagt aaataaatccctttcggcggctggtacaaaatgaacagttggccgacaagcttcaaggccaactatgaaattttatgtat acttggtgaatgctgtcttaaaatccgtaaagtacctcatgaaattacatatcaaatgaaaggtgaagagggtgaagaat ttaaaatgaatttgttacccaatcagagcttagaaaatccgcgcaacaacagaactgcggcataaactgactgtgcgact gggattttaaaaacgagatttttaattgtacttctagagagaaaaaaatagcatggttttttgagcaagtctttttgctt tcaggagaagcaggtaagccgggcaaaaacaagccattcccaggacctcctggtcctaaaggagaccaaggacctgttgg taggactggatcccagggacctcaaggcgccaaaggaaagaaggggcaaggcggcactagaatgaatggggtgaattatg tgcgatggggaagaacatcatgtcccaatggtgcccaggttgtttaccaaggtaacaagaatcgttggtcaacacattag acctttgcagttacactcgggctcattcgagtattgatgcttccgctgagcattttgttggacatagcaattcctttcaa gaggaacaaaaaagcattaaattaagtcacagtaccggagtattaacaaagagtacttgaaagcgaataaaaaacctcct tactgccttactaaaagcaaataaagaaaaacacgtacccacaaaattcctttcgaaatttatgcttatgttgaaattgt aattccagtacaaattattgccggccttttttgtccctcagaaaactgagcacgttaggcaacgtcctttttcatgtttt agggataattggtggagagcattacaatcatttcggtggtggatcacagtacctttgtctccctcgcaacccaaagtaca acaagtacaaaaatggccaccagtatgcgggatacgtttacggcaccgagtatgaagtaattcaatacaacggaaatcct ttcgccagaaatttgcacgatcatgatgctccctgtgctgtttgcttcgtcaagtcacgtggttcaatgctaatgatgcc cgcaaggaatgactgtccatctggatggaccgaagagtatcatggctatctgatgactgagtatcatgctcacaggcatt caagagagttcatctgtgtcgatggtaatcctgagtatgtccatggcagcgatcgcaatagcaatggcgccttgctgtac cctgtggaaggagtgtgtggatcgctcccatgtcttccatacgtggcgggaagagagttgacatgcgcagtctgtaccaa gtgagatcgttcaaagagcaagcagtcacatcaaaagaaacggaggcctaacagcagttgtcatgtgaactacataattt aaaattagaactgacaaaaagaagctagatgaaatatgactcgcttgcatagcaagcaagtcatttgttctgtagatata tacgggggaaaacaataaaagatttgggatgttactgccaataagaccttggcttgtaatactcagaaacattactcaca caaacattattcattcacaggacttccagacatgctcgagtttcgcgatcacaacagctgaatatgagttgccgttatga aaatgcatgaacccacaagctagcttatccaataactaaagtttggttttatcgaacgagttgataaatgttgaattacc accgtgaaagatttagaaagctgacgtttcgagcgttagcccttcgtcagagcgaataaaggaattgtgggctgttgtgg tttatatgagagtgtatagaagagcgttgccattggtggatatattttcttagttatataatatgaacnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnattttccctcattcaaccaatgaaatcact gatttgcagcgttctcgttgccatttcctaatatgtacatgaatagtgataaattcagcaccacggccattgtgctagca gtacttatcacatgcgggggaaaattactgaatgctgagacaaaatgcatttttttcgttaaacttctcgactcgagtaa ttttgggaaaactttgaaaatacgcgtgaaattaatccttatttcccctcgagcccatgcgattacatatactaattatc acctgttgaattaattgacttcatgttcaaaaatgcaagttatgatgttcgtgaaactcgaccgggttagtaatggtaat aggacttagtagagtacaattcagggagtaaatagaacaataacaaatgtttgaacatgattggttggtaacagtcctta tttatggactaattggctgttctagggtcggaactgttcgacttgacccgtctgattacaaacatttgcgtctcaaccgc gagctcaacaacaaacgattttcacagcgttccacgcagaaatcgaacaaacgacctccgaaacgccggtcggatgctct aaccattgagctggaagaagtagtaccggtgagctaggtcgcttgactgggttcttctttacccaaagtgttcctgattt ggactttgaacatatttcactacttccttcagccgttgccaagcaaccataacttacgtcattcatgcacgggtgtgttt aaaacctcattccttctttcacatgatctcagatatttgtttcgtttctccaagctacagcagtagtagcaaaagaagca atacaaggatcattcaaagtcaactatgaagtattcgcaagtcactctctcttgtattgaaagcctgcgcttcttggcgt tcttaatgatttgtggcaccattttggctcacatctctgccacggagagcctaaaagatgacgacgcacatggaagaaga caagagttaccaaggttgatccgccaacgcagagcaattaagaagaacggcacaacaaatccacaggacattgaaaaacg acttaaaatccttgaacacaggtatgtcctaccaatgcagtttagcgaaagacgaggcaattcagaagcaaaatgcatgc agatcgtatttcgaacgcaaagaacatgccgaaatgactgaggaaacatgttatatgcacttaaggatgttgctaaaact aggaacggggaacggggaaccaggaaccggagtttgggaacgagtttacagcggtaatctgcatgagacgttaggtcgtg tgattccaccgatttctgtagcacaagacaatccacaacgtgttaaagccatgctgctgcacacatttcagctgcatatc acaacgtgttaaagccatgctgctgtatatatttcagctgcatagttgaagcatttctatgtctttgatctttaaagttc ttttgagggccttcaaatttactggaaagcgaaacattattgtaaaaatttcgtcatattttgatttttgcattgtttac tattttatcgaattaatgtaacttgtatttgctaacgttgggttagtgataagcatacgttgttttgtggttattgtatt gtgccactaagttgatgaaatagattgcttattaatttttttggaaagagtgtcttatttgatttaattaaacctgctac cccattgttgcaatttgccgataatgattttgaaactatcacctacaagcgaactctgccaaaaagatgctgatttcagc aagaaaaagacgaagcgtcaaaactaatgattcataccattacaaggaacgaatgaattgaatgtataataattaaagtt caggttatagatgaaagagttgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn tatttccagggtaaactttcaatgcgagactttgcaaaggactctcagttgaacgatcaatgcgtagcattttttatgaa gttatcgccgatcgaagcaaaggtatcaatctcctagctcaacgagaacctttttttgttgagatttcacaacaatccag cacaattgacatttcgctacttaagtcccgcacaatttccatttttcccacatcatgtcagaacccttggttatggttta agtgaccgcttttatttggaacactcaagtaacgtttcgtttcagtcgtggcgatgatgaaacacaatgtgtacatctct gacaggttttgttgtgctaacgaagaggcgcaaactttgcgatcataagatctatcgtggataaccttctaaatacgagt ggacaaatacttaacaaatattctacgagagcgcgttggatatgaaatgataaataaccagcttggcacagagttagtta tgaccataggcaggagggctgggggtgcgggggagggggggcttcagccgtcgtaactgaaagttgtttttactagaagc tgaacatcaacagaaaaatttgctcctgagtaaatttttttttatcacgatggtaacactggtctttgtcattcaaaaac attcactgcaatgaagaggtgaatgccattagtattttaatacagtggcagaatttctactcgttaattccaccactagg cgatttgtaatggccaccaatttcgtatggcgttatatctccgccaaaattcaagttcacattttaacattcgagttcgc aatgtaacatacgatttacgtttcaacattctagtttgtaatccaacattcatgtttacgatttaacattcgagtagaca atgcaacattccttttgacaaagttaagggaacaattcaacatgcgacgtgacaattcaacaacttgtgggaactgggta ttaaaacggccagcattgctcgcgcccgggaactggaccgacccaggcgtacaacaataaagatggctgaagaggcgcat tccccagaagaaacttctgcaaatttttatagtttcgcctacagtgtagttgagcaaacaatagcaagattggaaagttt aaatgatctgtcagaaatggatggcctaattatgctattagaatgtctgaatcggtccctcgctaacttggacagtcgtg acacggatgaaattatgcttcattgaatgaaggtttgtttttgtaatttctgaaattttagggtaaagtgacagtaacgt gtcgagatcataggaaatgaattcaatttgatttgagatcaaaattacactccactcagtttatttactaattagttatt ttactcaactcattttcaaatcgcattcgcgagtgcaggcaaggcatagaaatacatcagctagtatcggtgcatttcta tccgattattgtctaattcaccaacattgcactgttcatacaaatagattgcaaggagcaccagaggtcttattcttggt ttgcatctgacgtcacggcggccatgttggtgtacagaacaatggtgaaagaagtcttttgggaatttggttctattatt atgcaaaacttgagcgacattttgccactgttttgtacaccaacatggccgtctcatcacgtgagtgaaaaccaagaata atgaggtaatgacaacggcaacttcaaaagggtttctgataatacaaactgaaagaaatgattgtttcatcgactatcaa cgcaactggatctttgtgtgctttttgttcaatcacacagggcagaaatcccagcacaatggaaaaatcaataagggacc tccaggtccaccaggaccaccaggaatacgtggcccaaaaggtaaacaattagcaaataaacccttcaataactcaacag tttgccgacaagcgtagcttcgagggcaactgtgaaaaaatacactttgcttaatgacgtcctagaattcctcaagcatt tcatgagactaaatattgaacgaaaggtggcgaaggcgaagaaattagaatataatgaattagtgacgcaatcagagctt agaaaaattgcgcaacaacagaactgccccacaaaatgatactgggattttaaagacgccatttttaactgtacttctaa ggagacaaaaatagcaaatcttttttgcttccaggagaagcaggcaagccgggcgaaaacaagccattcccaggccctgt tggtcctaaagaagaccaaggacatcttgctaagactggagcccagggacctcaaggtgccaaaggagagaaggggcaag acgacactagaacaagtggggtgaattacgtgcgatggggaagaacatcatgtccgaatggtacccagatcgtttatcaa ggtaagaatcgctagccaagacattagatctttacgcttacactcgggttttttggacacaataatttccttcaacagga aaaaaaattaggttaagtcacagtaacaaggcataaacaaagaagagctgaaactgaatgaccaacgtccctactgcatg actaaaagcaaatcgagaaaaacacctacctaaagaattcctttcgaaattgatgccaacattgaaattgtaattccatt acaaattgacggcggccttttttgtcccttagaaaattgatcacgttttgcaatatcctttttaatgttttgagggataa ttggtggagagcattacactcactccggtggtggatcacaatacctttgccttcctcgcaacccaaagtacgacaagtcc caaaatggccaccagaatgcgggatacgtttacggcaccgagtatgaagtaaatgcatacaacggaa |
Protein
Protein ID | aug_v2a.12502.t1 |
---|---|
Definition | - |
>aug_v2a.12502.t1 MKGDGRFYARCYEHSDFQFPSKIYTSICLLLRLSDCPYDCLHWQKSQDNGNSNKGPPGPPGPPGIRGPKGEAGKPGKNKP FPGPPGPKGDQGPVGRTGSQGPQGAKGKKGQGGTRMNGVNYVRWGRTSCPNGAQVVYQGIIGGEHYNHFGGGSQYLCLPR NPKYNKYKNGHQYAGYVYGTEYEVIQYNGNPFARNLHDHDAPCAVCFVKSRGSMLMMPARNDCPSGWTEEYHGYLMTEYH AHRHSREFICVDGNPEYVHGSDRNSNGALLYPVEGVCGSLPCLPYVAGRELTCAVCTKVGTVRLDPSDYKHLRLNRELNN KRFSQRSTQKSNKRPPKRRSDALTIELEEVVPLQQ* |