Gene
Gene Model ID | aug_v2a.12950 |
---|---|
Locus | scaf5206 : 6688 ... 11195 : - |
To GenomeBrowser | scaf5206:6688..11195 |
Genes list of scaffold | scaf5206 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 15-1 |
Description | This gene model has RVP and rve domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12950.t1 | gi|390349883|ref|XP_792400.3| | 0.0 |
Transcript
Transcript ID | aug_v2a.12950.t1 |
---|---|
Definition | - |
>aug_v2a.12950.t1 tggatagaagaatataaagtacatgtttgtgttgaacgagaaaattgttgtttaattcggctcgttacactggtggcagc ggtggtggattcgacctatcagcaaaatggaacattacaaagatggtgaagttcattttgaaccactaatcgatctaaac acgggggatatttgtccgactgtaaaggacacgacaatggctaaatcgcccgttccagttgggagcagcacgcctcacag tacaggacacaacagcgatggaactgtcgatcaagttttaaaagccattacggcactaagagctggaatggaaaagcaaa acagtgctttagaggatcgcttcggcgaacttagtaaacgcctcgatgcccttgaatcaaaacagcgtgaccgtcacgtt acactgacaaccgatcaccacaacagtcacattcctgaattgtttggtgaccctgaggaggagtgttttagcgttcttcc agcacctctttctcctagcccataccgccatcttcctcaacaacgagagaaaccacgtgtccgtccaagcccataaaatg gttcaacttcgtgggaggattattaagcccaattcgagcttgtagccgatctcaatcaatgggatatgcgaaccaaagca gcctacctagcggtcagcctgagcggccaagcccaggcagtgcttggtgatcttgataaaactcagcgtaccagttacat ggacctggtcgcggcacttgatagccgatttggaacatctaacagaacagaaatgttccgggtttccttgcgaagctgca ttcgtaaacctgaagaaaccctccctgaattggcccaggcaattcggcgtttgacaagacaagcttacaccgatgccacg gtttcccttcgcgagtcaatcgccaaagatcagttcattgaggcattggcagacccagaactgcgttggaaggtccatca agcaaaggcagttacactcacggaggcgttggatgccgctgtagaggttgaggcctttttctctgctgagaaacaacgaa gtagcaaaccaaagatactgcaggcggtcacgtctcagagtcctaggtcaacggacgcaacccttagacaagaggtacaa aagctcaaaacaatggttcagcgtctggcccagcatcctcgcagtacacccgataccccaccccacggttggcagaggac ggcgagataggcttcgtacatcgtccattaggtcactccagccacctaaggaacgtccgggaaacgagatactgtcgagt tcaagggctggagcccgacagaacccccaacactatggcccaccttcttatcagtaaaagcagatgctgtggacgctgac aaaaatgacctgtatgtgaatgggattgtgaacgggacaccggttcggtttctagtggatacaggagcagatatcactat cattcagacccagttgtggaaggccatttctcgcagtccagtgtcaacagcaagccaacttgaacatgtcctggacacca tgaaattgcctgatggacgttcctcatccttcccaggacgtggtacgatgaagattaatttaggcgaccgagagcttgcc cacacgatctgggtgacagatatcgaaccggcagacatcattcccttacgggtgctcaaccctagagattacccttgtac actgtataaggacactgtggcagcgatgtgtgaacctgtagaccttgtggaagctctgcacatctgggaaaacaacgtgg ccctctgccagaaacatgagaaaggtgatagtctaactgatgcagtggacaacgacggggaaacgctatccgtccccaag cacctggcagacttgtttcaacgcagctcgcatctgctaaaccctgatgagcgctcgcaacttgcacgagtgctgaccgg ctttgctggtgtatttgccgcatcttctgatgaccttggtcatacaagcttggtcacctaccagatcaacaccggctcct cacaacctattcgtcagcccacgcgacgccttccactacataaacgagctgacgccgacacactgctcaaggacatgctt aaaaagggagtgattgagccttcctcaagtccctggacgtcacccatagttttggtcaggaagaaggatgggtccacccc tttctgcgtggactaccgcaagcttaacgaggtgaaagttacccgcttccaaggattgacgactgcttggatgctcttgc aggatgcaactggttttccaccttagacctctgcagtgggtactggcaggtggctatgaacgaggaggacaagccgaaaa ctgccttcagcaccggcaatggcttgtaccagttcaccgtaatgagttttggtctctgcaattcccctgcgacctttgag cggctgatggagacggtgttgtctggctaaccatgggaggtgtgtctcctctacttagatgacatcatagtccatggtcg agagtttagagaagcgattcagagactccccacagcattacagcggttacgtgatgcaggcctcaaattgagccccaaaa agtgcattctccttcagaaatccgttccttttcttggccatgtggtgagcaatcatggtgtatctactgactccacgaag atcgaggctgtacctacctggccctccccacagacagcgagggatgtcaaaagcttcttgggtctctgctcttactacag acgctttgtccgtgacttttctcacattgctagacctctttacgagctaaccgagggccaaagagaattccggtggacca gcgagtgtgaggatgcatttcgccggctaaaagctttgcaaacaacagctcccgttttggccttcccaactaccgacggc ctgttcatcctcgatacagacgcaagtagcactggtcttggcgtcgtactctctcaagtccaaggggggggggggggaag agaacgtgattgcgttccacagcaggtcactgagcaagagcgagagaaactannnnnnnnnnnnnnnnnnnnnccgcaga ttcggaaatggcagacattgtcctatgtggtgcattccagggctcaggcaaaaccaaggatggggatagtctgccatctc cgcgagtaggtccaaaacctttacctgaaggtcaagagactcaaaacggaagttccagctcaaccaaagcctttgttgtt atcggtgccacaaacgacctgcgggctagtcagatcgccgattattacttgaggaagattatcgcatggaaggagtcttg ccactctcgcccggcatggaaagatgtatcagtggaaaataaatccatcaagacttactggagtcaatgggaccgtttat cactacgtaacggtgtcctttgccggcggtgggagttggaaacaggagacgaggtccgttggcagtttgttataccctcc aatctcagaaacgacgtcctccatgaactacacaccatggagactgcggggcacctgggtatcaacaagacgctagaaag ggttaaagacaggttctattggcctgggtgcacaaaagatgtgaaagattcgtgtcgggcatgcgatctctgtgcctcca gggaaagaccaactcgcacaccccgagcgcccttgtggacctacaacgttggcgctccccttgagagggtggcacaagac attttgggaccgttgcctgactcggaccgtggtaataaatacatcctcatcataggagattacttttcgaagtggacgga agcctacgccattcacaatcaagaggcaacgactgtagcaagagtgctagttgaagagttcgtggctcgtttcggcatcc cgaggcagatccattctgaccagggaagaaacttccagtcgaaagttttccaagaattgtgcaactcactgggaatggaa aagaccaggaccacgcccctccaccctcagtcagacggaatggttgagcgttttaaccggactatagaggaaatgttatc caagtttgtggcggagaatcaaagagattgggacggtcatttgcctattctgatgatggcttatcgctccctctgttcac gaaactacctcctttactccgtgcgagttgatattttgggcgccacatcgaccttgcgattgaccttcagcttggacgac ccgagcaagaaagtggttaccagaacaaaactgagtatgtccaacatctgcaagcccgattggatcgagttcatgcgttt gcccgtgggaatatgaagttagggagcgaaagacacaagcggtatcaccccacaaggcgcagaaccgtggctttgaacgt ggcgatcctgtttggctccacaatcctaggcgcaagaaaggcaggacccctaagtcgcagaggccctgggaggggccata cctagtgacatcacgcctagacgacttgatctaccgaatccagaaagggcctagatcgaaaccaatggtcgttcatgtcg atcgattgaagaaataccaaggggacag |
Protein
Protein ID | aug_v2a.12950.t1 |
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Definition | - |
>aug_v2a.12950.t1 MEHYKDGEVHFEPLIDLNTGDICPTVKDTTMAKSPVPVGSSTPHSTGHNSDGTVDQVLKAITALRAGMEKQNSALEDRFG ELSKRLDALESKQRDRHVTLTTDHHNSHIPELFGDPEEECFSVLPAPLSPSPYRHLPQQREKPRVLKADAVDADKNDLYV NGIVNGTPVRFLVDTGADITIIQTQLWKAISRSPVSTASQLEHVLDTMKLPDGRSSSFPGRGTMKINLGDRELAHTIWVT DIEPADIIPLRVLNPRDYPCTLYKDTVAAMCEPVDLVEALHIWENNVALCQKHEKGDSLTDAVDNDGETLSVPKHLADLF QRSSHLLNPDERSQLARVLTGFAGVFAASSDDLGHTSLVTYQINTGSSQPIRQPTRRLPLHKRADADTLLKDMLKKGVIE PSSSPWTSPIVLVRKKDGSTPFCVDYRKLNEGSGKTKDGDSLPSPRVGPKPLPEGQETQNGSSSSTKAFVVIGATNDLRA SQIADYYLRKIIAWKESCHSRPAWKDVSVENKSIKTYWSQWDRLSLRNGVLCRRWELETGDEVRWQFVIPSNLRNDVLHE LHTMETAGHLGINKTLERVKDRFYWPGCTKDVKDSCRACDLCASRERPTRTPRAPLWTYNVGAPLERVAQDILGPLPDSD RGNKYILIIGDYFSKWTEAYAIHNQEATTVARVLVEEFVARFGIPRQIHSDQGRNFQSKVFQELCNSLGMEKTRTTPLHP QSDGMVERFNRTIEEMLSKFVAENQRDWDGHLPILMMAYRSLCSRNYLLYSVRVDILGATSTLRLTFSLDDPSKKVVTRT KLSMSNICKPDWIEFMRLPVGI* |