Gene
Gene Model ID | aug_v2a.12961 |
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Locus | scaf5211 : 23807 ... 31505 : - |
To GenomeBrowser | scaf5211:23807..31505 |
Genes list of scaffold | scaf5211 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Rib72-1 |
Description | Named thus because a bi-directional best hit results was obtained by BLASTP searches. This protein has DM10 repeats and EF-hands. See chlamydomonas gene (AAM44303). |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.12961.t1 | gi|291231836|ref|XP_002735862.1| | PREDICTED: EF-hand domain-containing family member C2-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.12961.t1 | gi|699254475|ref|XP_009861426.1| | PREDICTED: EFHC2 protein isoform X1 [Ciona intestinalis] | 0.0 |
aug_v2a.12961.t1 | gi|115653418|ref|XP_791515.2| | PREDICTED: EF-hand domain-containing family member C2, partial [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | aug_v2a.12961.t1 |
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Definition | - |
>aug_v2a.12961.t1 acttctttagttccttttgttagcactaattctttggtgcttataaccatgcttttagcaactggccgctggaggagttg gggggggggggggatatcacctcatgaactgtgattaactgaggccgtctgattttgttttatagcatgtttggtgatgt ccgtgagatggagctgcattatttcctagctgacgatactgtggagatctgtgagagaattccaaacaacagtggcagag atgccgtgcccatgtttcttcgacgacagaaattgcccaaggttggtcaatttttttgacctgttatttgtagatttaag gaaaacaccagcttctgtatgtcatttcattgaacttgtgcccttttagaaagtaacagttactattaaagtgtgcatgc ctaccattttgtcagacctcaggctgccactatcagactatttgcaactagctagatttctagtttctaaagaaactatg gtgctcatgcgtcagtggaggagtcaaacaaaaattgaaaccagttaataagaaaggttgaattaccaccgtgaaagatt tagaaagctgatttttccagtgttatcccttcgtcagtctgacgaagggctaatgcttgaaacatcagctttctaaatct ttctcaattcaaccattatcaactcatttgatagaacccaaattatttttgattgcaaatagaatgcctcagttatgttg aactgatagctgtttctgccagactgacgcagctctgtagcgacaaccagttcagtcaatagcaactctataatcgtggc actctggttatatatttattaaataactttgtccaggagcccacttcacttcgtcaacctggagagattactggtaggac ggtcttgaacgtttttggtcccatgggtcatggaggaagatggattcttgacagcttaaaggtaaatttcactagttcaa aagtggttaacaccagtaataatattattatggtcaagtggaggctgtgggcaatcgagcaaaagcttggcatgatgacg gtgtttggggataatttctatttaaatataaaagggatagacctaattggctgtttaaactcaaggttgtacccaattca aatctctctctttttgtattgcatttgcattattatgtggcaaaatcacatttaaatgatatggaaattcctgaaccaaa acattttattcccagagggtttgaattggcatgggtacaacattgatttagctgattcggtctagtgtaacatattcttt attacagggaagtgaaaatgtaccagtaattggctctatcgcaggccacccgatatatacctcggctaagttttgcgaga gaaaatacttatgtgagctcagaaatgaccaaggtcctctggcacccagcccctacatcacgacttaatcattaaatgct cttaatctgtagctatacatattgtgcaatgcttttgttactgaagatgtcgttctctggttgttttcgttgtcagactg gtgctgttcatacagattattatcatgacagtgatctcacgattggctctgtcatcaatgtctggggtcgcaaattcctc atttgtgactgtgatgagttcaccaaggagtattacaagtcaaaatatggagttggtaagtattggttgactagcctctc ctttgctttggcacaggtccatggaaaaaacactatagacaactatagattttcaacagtgaaattaagtgcatttaagt acatacatacgtatttacagtgctccttggttatctgctgccttctttgtgagaaacaacaaccattttataaattatga aacagacataaaatctgtcgtgttaattcactcatttgtggcctacttggcatggcagccctcagtgtattgttagcttc tgctgttcattgtcaggccattgttaggcctgattttggctctgccaggccaaaaactattctactggaactctgttaat taaaggatgcgaagaccctgtcaggcaattatgatatgaaacaccaacaagttttgatggctggtggctttttttctgga tgttcacaggtgattttgaaagcatcagtttcaaagctgatccagtgtccttgccagtgcgagagatccccccctataat ggatttggctctgaagaggattcccttgccacgtgtctcagtctcagacccaagcccactcggcgagattttaagaaatt catggaaaaagacaggtacaatcaaatttagaaaagactataataattgttgagcgggtggcagaaatgatcttattcgt aggtcatgggcttaattcccaccctggttagagtttttctctgtccaggttgtttccataactagggctaatactcactt tgtcactcaaatggttcattttggtaaaaatttgtctgaggtagtatttcttaagctagagttggttcatacttctctta ccatgtaaatacgtttttaatcaggtaaaacnnnnnnnnnnnnnnnnnnnnnnngttaatgatatcatcggtaaccaaat ctctagccatgtcaccttgacaacttcaaattgaatatgtgtcaccaaaaatacccccaaacaataaccgcagtacgcaa taggtaaactgtataatttataattgttttttcctcacctgagttgttgcctgcaaaagcgcaaaaaaaataccagactc attaggaaaaaaagtttaaataataatgcaattacctgagacaaaaactgttaaccataatattattatagacaagggtg ccgttcttcgttgaattttacagtaccattaagctttttctttccttcttctattaggaaaggactggaaagtaatgttc taaggtttgtggcccgtctggataccacacggccaattgatactgatcgcaggtaagaatataatttataaaccacatct tgtggtgctatggtagaattacaccctttggtagtgtggtaaaaaccaaaccctgtggtaattccgtaaaaaccacaccc tgtggaagtatggtaaaaaccatgactggcgatagtatggtagaaaccacaccctgcagtagtgtggtagaaaccacatc ctgtgaccagtagtatggtaaaagccacaccctgtggtagtatgataaaaaccacaccttgtggtagtgctgcgaaaacc acacccttgtattttcctcgtattggacatccccctgcaattgaggcatatttcttattattatttaccaaatcagtgga tagcaattttcgcgcgttttgattggctcccgtaactcggaatatccttggatattcactgtttggcgaaccgagagaaa aatggcgcgtcgtttcgcgaaagtttctgaagaagaaattgaaggagcgttttttttatccatctgatttggtaaatact aaaacgactatccccctcagggtcggtgcatgaagagcggtggatatatacctcgacgcttcgcgtcttagtatatatcc accactattcacctccccttcgggggatagttgtataatatttatatgtgggatttcggatggtaacttaaagcattttt ttgtgtgtgtctgatagatttatcatttcatacttcctctctgatgacacccttcttgtgtttgagccactccagaggaa ttctggaatattgggtggaaagtttatggagagagggcgaattaagaaacctgatggtgtgaattactttgcagctcagg taagttcaattggctcagaccgttttttggcaaattgtgataagatggaggttaagatacacaagaaatggagttattgt gtgtgttaaaatttgctacgctttgaattgaagatcaatattgagatcgtgcgagaggctaaggccagtgaactacgcga ttcctggagcgcacggcgctattgctgtcgcgcgcgaggcgattttcttagcgcgcgacgcgactcctgtggcgcgcgac acgatttgtgttgtagcgcgcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatacagttgagcccgca aacaaaatttcttttgtttacaactacatgcaaacgaggttaaggggtcaatacaatgggaaatgacccattagcctcgt ttgtgtgccaagaccgctggtaactgtaatagcagctattttctcacaaaattttccttttgtttcgtcacggcaatagt accacttatcacataagtgaaattatccataagggaggtactgtaataagctcaaaatgtcagccaccaaccctcccctc cccctaccggggtcaacgacagagtttttgagttgtaaaaattaaacttactccgttgcattgcaggacctttacatcgg tgcaaatgtcgacttccataactttaagtttatcctaattgacgccgatgagtatgctgtggtttacatggaaaagcacg ccccggaatttcctcaagcaaatgtacagatcattctgcccaaactcaagcctatcttggaccagaaatatgaggagatc aagcgcgagtttcaggcgtttgatatcgaaaacagcggcaaaataccggccaaaaatttccggtgaattttcagtttctt tgattatattttcatgatcgcttttgctcgacgctaggtgtttacagagaaaaggggcaaaaaactaaggtgcattcgtt cttgtacatgagggagacagagtagaacttctttacgcactaaccgttctcttcaatggaagcgtttgagacaaacgttt tgccgttcgtatggccttggtcgtgatagttttggctagaatatcattttagaatatgaatatcacttttggctagaata ttatttatattagcaatctatgtcagtaataatccactcagtttgtccaatttctttcagtccccagtcaatttttgtgc gcggcgagtcccctgctaagcgtgtgtgtgtaattgaagtcatcttttgtgcccattcgttctcgataaaacgctaagta attcgatcattgatttattttcttattgttttgctttcagggaaatccttcaaaggtttgggcaaggaatcttaacagta cacgagcaactgactgtagcaagacattatggagatgtccaggtctgaaataaagaaggacatttcctttttagtttgcc ttcgagtcgctttgtggtgcgaattgtcagtgtactttaaaataacgtcgttgaacaaagttctgagtgacgaaggaaat ttgccatcaaagtagtttataccaaatttaccaccgaagaaagaatacaaagctatgcatttactgtgaaggcttgcagc tcaccctagcttacctattcaactctttcgttgccaagtcttcgtgttacacagtgccttagttaaaagcgaaactcgtc taaagttcatcgccgtttgttttaggtcgaggaagacgactttcagctgttagtggtggcgatccaggagcagttgagaa aagctaacttcgaggattttgccaacatgatggattcctgtaaacacgaggacgtacttgggtaagtagaggtcgtggag gggttagatctttaataggaggcagatgagatcttaacggctggtaggaaatcttttgacgatttgccttttacaatatt tggattttttaggcccagtccacacttatgcgttttaaaagtagtcgttttcggtgtcgtcgaaaacgcatcgatcgatc ggtgtccacgctacagttttcgcagcgttttcaactgtccacactaaaacgatcgaaaacgcagagtgccatggtttgac gtagtttaatatgtaagtgcatgcttgaaaagtgcgcatgacgtaagcgttttcatttcgaagcgttttcgtgattgtcc acacaaaaacgatatttatgcgttttcgttttgatcaactttggagagctttttaaaaccgatgcattttttgttaaaag cactgagcgttttgaaacgaaaagtaacgcatcttttggacggggcgtattcaaatattgtcgaatttgttattcttgta gcaccggttttcttccactgcaagaacttcacaacacatgcagacgcttcggtgttcccgccaaacaagacttgttgcgt gcccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatacc aatcaatgtgctctgtgagcaacaatggatgaaagaagcaaaagtcgcaaatagtaaccatttcccaaatgtttattttt aagtgacgttttcgccgccgtttctgtcgcttctgcttcagtaagcccctgttggggagtcctggcgaggacagcttcgt agacagcgagaactttgtatgatggtgcaacttcgcgtttctgtgatcatttctcgatcattacaagtcgttgggctcgg aaaactgaagttgaattaaattggtatgagcggcttggacataaaaagaaaaaaacatatatcttgtggctaggttgtaa acggctgcgaaatgttcaggtaatgaaaatcgctaatatgctaatttttctcgtcgtctttgaggttgcttaagctcgct aacgatgtgaagtgacctgttttactgttgtgcagactacgtaagcagttgcgacaaatttgaattcattctttctcgtt atctttcacctcaatctaattccattatagttggtacatattccgcaatccagactacttggaatgatcgagaaatgatt gcagaaagtcagaatagcgtattttaaacgactttctctttgttttcgacgtcgtccttttttaagctcgctaatatttt cgacgcatatcaagtgaggtttcacaatgacccttctttcaatgattatttgtcttccttttttcagtttcgtctcaaaa gtttgttcctgcagcagctcccgatccgaaatctgtggtgagttgatttagctatttttgaagcatccattgtttgcttt aagccttatgggtcattgc |
Protein
Protein ID | aug_v2a.12961.t1 |
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Definition | - |
>aug_v2a.12961.t1 MFGDVREMELHYFLADDTVEICERIPNNSGRDAVPMFLRRQKLPKEPTSLRQPGEITGRTVLNVFGPMGHGGRWILDSLK TGAVHTDYYHDSDLTIGSVINVWGRKFLICDCDEFTKEYYKSKYGVGDFESISFKADPVSLPVREIPPYNGFGSEEDSLA TCLSLRPKPTRRDFKKFMEKDRKGLESNVLRFVARLDTTRPIDTDRRFIISYFLSDDTLLVFEPLQRNSGILGGKFMERG RIKKPDGVNYFAAQDLYIGANVDFHNFKFILIDADEYAVVYMEKHAPEFPQANVQIILPKLKPILDQKYEEIKREFQAFD IENSGKIPAKNFREILQRFGQGILTVHEQLTVARHYGDVQVEEDDFQLLVVAIQEQLRKANFEDFANMMDSCKHEDVLGT GFLPLQELHNTCRRFGVPAKQDLLLSSQKFVPAAAPDPKSVVS* |