Gene
Gene Model ID | aug_v2a.13366 |
---|---|
Locus | scaf5428 : 9540 ... 12135 : - |
To GenomeBrowser | scaf5428:9540..12135 |
Genes list of scaffold | scaf5428 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
low quality protein: type iii iodothyronine deiodinase-like | GO:0008152 GO:0016491 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.13366.t1 | gi|597791707|ref|XP_007287887.1| | PREDICTED: LOW QUALITY PROTEIN: deiodinase, iodothyronine, type III [Astyanax mexicanus] | 9.0e-16 |
aug_v2a.13366.t1 | gi|657734514|ref|XP_008307743.1| | PREDICTED: LOW QUALITY PROTEIN: type III iodothyronine deiodinase-like [Cynoglossus semilaevis] | 5.0e-15 |
aug_v2a.13366.t1 | gi|742136877|ref|XP_010877824.1| | PREDICTED: LOW QUALITY PROTEIN: type III iodothyronine deiodinase [Esox lucius] | 2.0e-14 |
aug_v2a.13366.t1 | gi|169791009|ref|NP_001107139.2| | type III iodothyronine deiodinase [Xenopus (Silurana) tropicalis] | 3.0e-14 |
aug_v2a.13366.t1 | gi|148224369|ref|NP_001087559.1| | MGC84484 protein [Xenopus laevis] | 3.0e-14 |
Transcript
Transcript ID | aug_v2a.13366.t1 |
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Definition | - |
>aug_v2a.13366.t1 gtttaatccgcggaagccactttgaaatctaaaaggctctacacgttactcacgctatcatgccggctatcaggggactg aattatacaatttcccttggaataacatatatcaagtgcattttgctcttcgtttacaaggttgtgtgggcccatattcc aattctcaagaacaagctgcaaaaattcgaagaaaaaatcaacaaagtcccttaccaagacttctggcacgtctatggtg gccgaaagcactttgtctctctcctcagaatactaaccagtgatttagacaagacagcaaggcttggcgcggctgctccc aattgcaaagttgcaactattgacggaatggaatgtcgactgttggatttcatgaaagggaatcgcccgctagtacttaa ctttggtagttgcagctgacctccattctttgtcacttttgtgaaggactttgaaaaagtcgttcgcaaatttgacaaaa ctgctgattttcttacggtgtacatcagcgaggctcacccaacggacgactggcgatttaacgtaagtaacaaattgtta gcgcctgctcaacgctactttcaactatagcctttaaagcctttaatttttttttgcaccagcaatgtaattcttgtgca tcgaccttttcaactcaaggcatatctgtaaacgctaacagcacgacaaaggaattctcagtcgagaaggaaaaaagaat gttcattatgtataaatatattggaccgtaatttttttcaaacttctgtttgttgtaatcaccatattgaaaggactttg gagtgggtctcgtatgcatattaaacgacacaaactgaggcgttcgcgaagtgctccaattttaagctactaaaagaaaa ttgtccacctgcgaaagaattttgtgtcattgatcatctggaatcttgccaactgatcaatattgactcaagcttagttt acaaaatcttttttttccgggtcaaaggtctataaattctgatgcaaaatatttagttttattcctatcgttggaatgat acctttgggatattttaaccctacaaatcttgagtgttgtgactaagacaagcgttaaatgatgttttgttatggaaatc acagcacacgattttgctttcgaaacatttgatattcttgcttggatcgaaatgtaatgcaccgatggaatcgaaacttc aacatcccccccactgggcgaaccctgggcattggacgactttctgtgcccggagagaggggaatttgatgggaaggcct tccaggggtggggaattcgacttttgcctgggtggggtggggtgggcaaaattgaaccgaagtgtcaggtttcaagtgat ttttttttcgtgcgctgaaggcactaacaaaaataaacacatgaaaaatttgtgagcaattgacttacaagaaaaggtct tcaaaagtcttgaagtatcttttaaggcatgtatgagaagcagagagtgctcaaatatcagtaattttagattgtaacga caagggccgacgacaattgttcctttggaggggcaatttgaacgattcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnccagcgcgaatacctcttgcctcgatctcagagtgaagatagagagagaactc tgggaaccaaaattgaaaactgcggctactggcacttagatccctgctccgcttgtagtcaagcgggaaatgaaaaagtt cctgagaacgaggttgtattcccgggcaggtcaagtgttcttctttctaaaaggggaggggatagatggggcactttttg tcatacagcaacaggtcactcccgatctcacttgaagtttataaactacttaaagtcatccataaaatttctggaggaga aaactaacgtaatctaacaaatccccaaatattgcaacttttactattgacgccttttcccgccaacagaacaatgtgga aatacagcagcacactaatctaaaagagcgctgtgaggccgccagaatgctggaagagtcgtgcccatgtcccgctccga ttgtagccgattcgatgaagaacgaggcgaatgatgcgtatggggcctggcccgagaggctgtttatcatacagcaaggc aagattgtgtacgagggggggacgggtccgtataattacagcttagatgaagtggagaagtggttagaggattatcaagt aaaaatgtaatttttaggcttaagtagacacattatggttttgccacaaagtgtctccctgaaacaaagtacaagtagaa cctcaaccaaacagtactaagtagagtgttaataggacacccaaggacaccttgggacgcttatacaaagtagtatgaat ctcttagtgcaactgtattggacatgtatgtaggattaccttaagtgtgcatcaagccagactcataattcggaagatag tgagcgctatgttccaaccaagttaagcgttcgtttgaaagaattgcattgtgtttgttccacaggcatctttgacctcc gtcctctcctttaattaataaacaaaaaatagcacn |
Protein
Protein ID | aug_v2a.13366.t1 |
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Definition | - |
>aug_v2a.13366.t1 MLEESCPCPAPIVADSMKNEANDAYGAWPERLFIIQQGKIVYEGGTGPYNYSLDEVEKWLEDYQVKM* |