Gene
Gene Model ID | aug_v2a.13521 |
---|---|
Locus | scaf5519 : 102006 ... 104297 : + |
To GenomeBrowser | scaf5519:102006..104297 |
Genes list of scaffold | scaf5519 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
probable atp-dependent rna helicase dhx35 | GO:0004004 GO:0005524 GO:0005737 GO:0006396 GO:0044822 GO:0071013 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.13521.t1 | gi|585665325|ref|XP_006816912.1| | PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.13521.t1 | gi|556959575|ref|XP_005990471.1| | PREDICTED: probable ATP-dependent RNA helicase DHX35 [Latimeria chalumnae] | 0.0 |
aug_v2a.13521.t1 | gi|573903845|ref|XP_006639645.1| | PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Lepisosteus oculatus] | 0.0 |
aug_v2a.13521.t1 | gi|507961766|ref|XP_004687438.1| | PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Condylura cristata] | 0.0 |
aug_v2a.13521.t1 | gi|560960307|ref|XP_006202603.1| | PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vicugna pacos] | 0.0 |
Transcript
Transcript ID | aug_v2a.13521.t1 |
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Definition | - |
>aug_v2a.13521.t1 agcaaacaacaggagttgattggccaagtagtggtatttacgtgtgtcatacatcggaaatcaaaaatggcggctaacac gagctggaaaccacgcttttggaagcccgattctgaaagaccaggaagcactatcacgcctgaacggccaataaatggcg aagatatatctaatgcagctgtttataatccaaatagttttctatcgatgagtcttcaaagacaaaagctgcccattttt atgcaccggacaaacatcctgtacctgttagaaaaatacgagactgtcgtcattgtaggagaaactgggagtggtaaatc cacacagattcctcagtatctgcatgaaagtggctggacatcagaaaaatggaaaatttgcgtcacacagcctcggagag tggccgttgtcactgtggcaaccagagtggcggaggagaggggttcatttgtcggtggtgaagttggttattgcattcgg tttgatgattgttgcaatccagaggctacacgggtgaagtttgtgactgatggtgtgcttttaagagaaaccatgagtaa tccattgttgtctgaatacagtgtgatcatgttagatgaagctcatgagagaaccctccacactgatattatgattggtc tgttgaagaaaatcaagaagaaacgcaaggacttacgcattattgtgtcctcagccacacttgatgctgaaatgtttaaa gagttttttaacaccaatatcaccagtgacagaagcaaggatacggcagttatactatcagtgaaagggcgctcataccc tgtagatattcattacaccctcagccctgttcctgattacctcaagtcaacagttgacactgtcatgggtatacacagag aagaacctcatggcgatattcttgcatttcttactggtcaagatgaggtagaatcagtggtttctctgttaattgagaga gcaaggagcttaccaaagggttcaccgcatattcaagtccttccaatgtacagtggccttccacaaacagaacagatgct agttttcaaaccaactccaccaaatactaggaaagtagttgtggcgacaaacattgcagaggcttctatcaccataaacg gtattgtttatgtcattgactgtggttttgttaaaatccgtgcctactcacctaaagcaggggttgagagcttggtagta gtacctgtttcaaaggcctcagcaaaccagagagctggcagggcgggtcgcgtaagatcaggcaaagtttatagactgta cacagagcaagattttgtggcattaaaaccagcaactgtcccagaaatgcaaagatgcaacatggctgcagttcttttgc agctcaaatgcctaggaatagataatgttctgcgcttcaactttcctgctcgaccacctgcacataacatgatccgcggc ctggagttactttacgctcttggtgcattagatgcaaatggcaaactaatggatcctttgggaacaaacatggctgaatt cccaacaaacccaatgattgctaaaatgcttctctcgtctggagaatttggctgttcagaggagatcctatcaattgcag ctatgctgcagatacaaaacatctttcttagtccaagcaagcagaaaacggcagctgacaatgccaaaaggaaatttgct gtttatgaaggagaccacatcactctgctcaacgtttatgaagcatttcttaagttcaaaaagagttcaagatggtgcca tgaacatttcttgaactacaagggtctttgccatgcagtaaaaatccgagagcagttgaaaaggctcttgttacaattca aagtttctttgatctcatgcgatggtgatgttgatgcaatatctcagtgtattgtgagtgggttttttgcaaatgctgcc cgcttgcatccatcagggtcatatcgcactgtgcgagatgaccatcccttgcatattcacccaacatcaattctttatac ggagactccaccacagtgggttgtgtaccatgaaatactgcaaacttccaaggaatacatgcgtgacgtgaccaaaattg atccaagctggctttacaaattggcaccccagtactatgagtatggcacagagagagaaattgctgccaaacgagccaaa atgatttaaaggacatgaaaagctttgatgagaggaagacaacagagaaaacaagttagaaatttagcaagatttttgca agtaagatgaagagatgttccctaagcaatagaataaaaaataataaatcgt |
Protein
Protein ID | aug_v2a.13521.t1 |
---|---|
Definition | - |
>aug_v2a.13521.t1 MAANTSWKPRFWKPDSERPGSTITPERPINGEDISNAAVYNPNSFLSMSLQRQKLPIFMHRTNILYLLEKYETVVIVGET GSGKSTQIPQYLHESGWTSEKWKICVTQPRRVAVVTVATRVAEERGSFVGGEVGYCIRFDDCCNPEATRVKFVTDGVLLR ETMSNPLLSEYSVIMLDEAHERTLHTDIMIGLLKKIKKKRKDLRIIVSSATLDAEMFKEFFNTNITSDRSKDTAVILSVK GRSYPVDIHYTLSPVPDYLKSTVDTVMGIHREEPHGDILAFLTGQDEVESVVSLLIERARSLPKGSPHIQVLPMYSGLPQ TEQMLVFKPTPPNTRKVVVATNIAEASITINGIVYVIDCGFVKIRAYSPKAGVESLVVVPVSKASANQRAGRAGRVRSGK VYRLYTEQDFVALKPATVPEMQRCNMAAVLLQLKCLGIDNVLRFNFPARPPAHNMIRGLELLYALGALDANGKLMDPLGT NMAEFPTNPMIAKMLLSSGEFGCSEEILSIAAMLQIQNIFLSPSKQKTAADNAKRKFAVYEGDHITLLNVYEAFLKFKKS SRWCHEHFLNYKGLCHAVKIREQLKRLLLQFKVSLISCDGDVDAISQCIVSGFFANAARLHPSGSYRTVRDDHPLHIHPT SILYTETPPQWVVYHEILQTSKEYMRDVTKIDPSWLYKLAPQYYEYGTEREIAAKRAKMI* |