Gene
Gene Model ID | aug_v2a.13526 |
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Locus | scaf5520 : 13966 ... 20531 : + |
To GenomeBrowser | scaf5520:13966..20531 |
Genes list of scaffold | scaf5520 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 14-5 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 14-1. This gene model contains zf-C3HC4 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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ring finger and chy zinc finger domain-containing protein 1 isoform x3 | GO:0044267 GO:0046872 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.13526.t1 | gi|156392697|ref|XP_001636184.1| | predicted protein [Nematostella vectensis] | 2.0e-25 |
aug_v2a.13526.t1 | gi|567863596|ref|XP_006424452.1| | hypothetical protein CICLE_v10028942mg [Citrus clementina] | 7.0e-22 |
aug_v2a.13526.t1 | gi|524927987|ref|XP_005068211.1| | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X3 [Mesocricetus auratus] | 9.0e-21 |
aug_v2a.13526.t1 | gi|560899939|ref|XP_006176391.1| | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X3 [Camelus ferus] | 2.0e-20 |
Transcript
Transcript ID | aug_v2a.13526.t1 |
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Definition | - |
>aug_v2a.13526.t1 caccgatcgatggatatttcggggccgaagtcggagttggcgtgtttggttgcaagggttcacatactgtgccgaaggga aagcaaatttgcaaaaccccgcgagaaagcgaaatgagatgctttaccgggccagtactggagtgcaagatatcttcgaa aacttggtactcgttccccttccagatggccaaatggatgatgtttatcaacaagccgtacgagctttgaatactcatat ccatgtccagaagaacgctgcctatgaaagacacgttctgcgtcagttacgcgtgacaaggtgtgtcctgcgaggggtaa ggcgtgtgccaagtgcggtaggaagaggcactgggcaatatgttgcaggcatgaggcggataaaaagcagagcaagaccg gtggaagagctagtgggagtaatagttatcaaaaaagcagtgttacatgcaaaccaccgctaaggctcagatagcaaatt aatcaagtggaatatgataatgaagatgagcctttcgccttcccagtaaactttagtggggaagcagcgtgtgaagataa cattgtagcagtgaagagcaatggtaccgctactaagatgcttgttgatgctggggcgcagttttctgtacttagtgagc ggcagtttcacagccttgtgaggggtgcccgcagtgcattcttggggcgtaaataataaaggttaagatggcagacatta gacattaaactggcataagcagattagaaatgttgatcaaaaagtagcctcattttgcccaaattattgtaattcttgag tcaaaaagcaaatttgcacaagatacatgagaaattattcccatgtggtaatttatttcgcaaggaactacagcttcact tctatagtttaacacttgtaactgtataccagtaaattacctctgtaatgttttgaaatgtattattttgacagacccaa gcttaccaattagctgtggaatttcagcgtatgaaggatttggccaaaggcaaagtcagtgacttcaaccttgcaaaaat ggcagttccatatcaattgctaaacgagcaggaaagagttagtgaacatccacgcaccgacataagagagctctttgaaa gtacccagcgtgttgatctactaaagaaacctgaaggttctttacatgaaggtgtggaattaataataagttgactctag attttttttatacagccctccctaatgaaaatgcatctgtctttgctgctgtgctttagatcattgaagaccatcctgca tctccccgagtgcgaataggactagcatggatggattagaaatgttgaacaaaaagtaatcttttagcgtcttgtccaga cgtcctccacaagatttcaaatttagccatttaacgtcgctgtttcataggggacgtcaaacaaatatgccaaaatgaaa aacgcactcacctccagaaatgtttgcttattaggtacgcaatttgtaacgtcgttattggcgaggctgttgccatcgca ttagttccccatgtctggccttttgtcgttatgttgtgtactgtgccacctttgtggcttcggcttatctttttcaacgt tttattgtcctcagtgttagggattgctgcagtgtcacctgtagttgacgatatgcagggaacttctattgaaccatgta atggaaatataggttcgagctgctctggtccaagggcatcttcagcgtcagcagaatctgattctggaatcagttcttca ggtaactctgcattcctctctcttttgacaggtcgcgacggactgactgtaggtgatggaaatcaactcacgcttcaaca taattcaattgaacgcgataaacgaactgtaggaaagggtgagtgcgatcctgactgttcttccaaagctggaaatcaac ctccgccggaacacaatccaagtgaacctgatcaactaacagagggaagccgggagcctgatgcagccagttcctcttac agaaactgggaacgccagggtgcacgacccaaacacactcaaatgcaaggtccagtgggcctgcctgtatggccgagctc tagacttgtgtccgacagtgtggcagaagacttattacctcaccactctcaagacaaagtcgtccgggaaagtcctgagc gctttcgggacacttcctttgttcatggcagtgacagtccatattttggagcagtgttgcccccagactactttgtaacc aacgatcacagtctcactggagaagaggattctagcagggaatgggactcccttctcgaccagaacttctgcggtagtct tctgtctctacaacagatcaataccctaatttcccctaattcgtggtttgtcaatggatcgacctgttcggattatgatg ctggaattcatccaggatattcactgtatcgcgctcaaagaaacgatgtagaggccaacgactattcacctgttgcctca gaacagggcacggccgaaccggaacagctcatgagcgagcttcaggaaaagaaacagttgatcagggataagggagaaag aacaagacgggagcaagaagacagtaaatggcagggggcggagccgtcgcagcaggaagacgttagcacaggctcacggc ggctgtgtgaacattacgagcgacggtgtagagtgcggttctcttgctgcacggaattctatccatgccataactgccat aacaactcaaccaactgtgaaatggcgacgccaaggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnngttctctctgccaatttgaacaggaggtaagtttttggttttctttgttgagagttcaggtgacgg taacagggagtttaagaaacgctttaccgactgctaagttctatttcgaaatgacgttttatcatatgacccgtgtggcc ccgcgcgcgctttcattgcaaaggtattgataaaatccccgtatgagggccgtacgcgatagcggattctatcaatagcg cgcgcaagatgcgaactaaaacaactttgttgctatataaatcgcgacttttcagtcaaaatgagcgacgtaaagaaaca tcgtttgctgcgctcggtgcgcacgccatgacctcgggccaaatattttcccgtccggcccttccactcagtcaataagt acatattcctggccgcactgagccgtcgtagcttcctaaacacccttatagtacgccatgaagagcaagaaagcggtgtt ggtgcaatgattgatgagagcactcaccttccaccaatggggccatggattccattctctgtgtcataatctgggccctg tttctcaaaagtcccgaaactgttcgggcctatttcgggtgccaaaatttcctatatatcttcgcgacgccaaggttctg agccatcaaacttcgcaatgctcttggtttttctgacatttaaaacatgttaaaagatcagctttatctaacaagtagat tgcagtttggcaactagcttttcgggcccgaaaggttctcgggactttcgagaaacaggcccctgggctgaatcgtgaag gaattttctgaaacgagctgatgctctctgaccaaaggccaacgctggaaagctccgcttttcaatatgtttacggtggt aattcaaccctcatcaactcgtttcaatgaaacgcaatctttattcttcactctcgacgtcgcatcacaatatcttaatc aaaccgagctgttcctataagtgaatgggatgaaattgtttgtgccgttgttttgtggccgatcgaacgcctgccaaatg aaacatgccatatttttgttccagctgattacgtgagactatgattttcatatgaggggtttagttcttaaagaaactgc gtcaccgtgtctgttgggaagtgagacacgaaaacgtggtattaaaacggttgataaaagttgagttaccaccataaaaa cattaaacagcgcaatttgagccttatcaaattgtgtaatgctaaacttccccgagattttgtggccatagtaatattac cattgacacgttcagtttctcgtcttgataaacgaactaccgtggttattgtgtctgggcgaatcatccgtctgtgcata taactgcttttaaggacgaactatccataaagtaaagactacgttagattagataaaggcagcttttcctttacggtaac ctcccaattcaaggtggccggaaaagtcgctgttttggcattttcagtgccaaagttaaattccttgtattcaaataatt tgctgccaaaaagatctcagttatcatggagaatatatcttcgttgcaatttttgtagattgatcaaagcagtgacgtat gccatcgatgcggagaaaagatggcggcctatttctgcttcatttgtaagcacttcaagagctcagacaagaatccgtat cattgtgatcaatgtggaatctgcaggtgagtttccaaagaccaaggtcgtgttctatttggttcaacagttcacaaggt tagttttttttttttcgtttgttctataaaaaggaaggagtttttggttgtgtatgttgatgaattcttttagccagctc cggactttgttggaaatgtctatagtgacccaacattgtgacagaaatgtatgcggtattggtcgactcgatgcgacata atttttttctgttcaggcactacaaggacaaaaaattccactgtaaagtttgcaatatgtgtttggataaacgactgaag aataaacacaaatgccgaccctactcaggccacgatgaatgctgcatctgcttggaggtttgtttgaacatttgaaatta ctccttatgttcttgcaccattgagaatcttattctgagggctgcagtacaaaagctaacgcgagcgctttggccaatca ctgcggaggtcgataatcgaattaagaaaaagtagacaataaattaatcacattaataaaaaggagacaggcggtaggca caatgagcggtaaaatacgtgccgataaattttttcgttattctcatgatttgaaaaaatggcgcgatagcttttgacaa atcccctcggctttatagtaaaaaaacgaacggctttactgcgccgcaaacggacaaaaccgctggttgtaatccgggct tcgcgttacttgtgcgtctgcgcagagtgtgcgcaatttgtacgcgagattttcccgcgccttgggcgattacaaataat tgctaagaattctgattggttcaccgcactgttaactctcattgtgattcgtcgaggtaattactttggtattcagtcat ttgaaaacgctctaatcacctaatcgtcgctattgcgcaaacgttttatgttacgacgcttggcagagtttgtaagaaac ggaaacggcaaccccgaacagaaaagtcattttgcaataacgatttttttcctttttgtttgtttgttttttttcccctc aggatacattccctggctgtctgatattgccctgttcgcataaggtgcatctgccttgtgccagagaaatgaatcgaaac aacacgtaagtaattaactatgtattaactctgcgtagactaatcacaataacgacgaaaatgtgcagaagatgtcttaa aaactacaaggaacaaatgtttgtttttgaggcaaactttagtgagagaagtgtttggccttcctcgttacattttttct ttgaaatttcgtgcagattggagtttccgttatataacgcaggtgacaattcttttggcgcgatctgattggttgcctcg aaggagattagcaaagtgttgtcgacttcagatcagcaagagagaaacaaaatggagtgttgtgttcgaaatcgtttcgc cgataaagttatacgtgcgaacaacatttgatcttatctgatttaagttgacttcagcagaacacaattttcatttcttg tcctcccgcatactcccaggttatttaaaaaaacggcttttgcccggggaaggactgttcaatttatttatagcggactt ttcggaacaaagagtgttaattggctgggtgtttttttccgcaggcgcgtttgtccaatgtgtcgtcattctttagattc ctggtacaaagaaggactcacgagacgccagctacgtaaacgtgacggttaattcagtgccttacaagtctaatggctgt ctcagg |
Protein
Protein ID | aug_v2a.13526.t1 |
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Definition | - |
>aug_v2a.13526.t1 MLYRASTGVQDIFENLVLVPLPDGQMDDVYQQAVRALNTHIHVQKNAAYERHVLRQLRVTRCVLRGTQAYQLAVEFQRMK DLAKGKVSDFNLAKMAVPYQLLNEQERVSEHPRTDIRELFESTQRVDLLKKPEGSLHEGRDGLTVGDGNQLTLQHNSIER DKRTVGKGECDPDCSSKAGNQPPPEHNPSEPDQLTEGSREPDAASSSYRNWERQGARPKHTQMQGPVGLPVWPSSRLVSD SVAEDLLPHHSQDKVVRESPERFRDTSFVHGSDSPYFGAVLPPDYFVTNDHSLTGEEDSSREWDSLLDQNFCGSLLSLQQ INTLISPNSWFVNGSTCSDYDAGIHPGYSLYRAQRNDVEANDYSPVASEQGTAEPEQLMSELQEKKQLIRDKGERTRREQ EDSKWQGAEPSQQEDVSTGSRRLCEHYERRCRIDQSSDVCHRCGEKMAAYFCFICKHFKSSDKNPYHCDQCGICRHYKDK KFHCKVCNMCLDKRLKNKHKCRPYSGHDECCICLEDTFPGCLILPCSHKVHLPCAREMNRNNTRVCPMCRHSLDSWYKEG LTRRQLRKRDG* |