Gene
Gene Model ID | aug_v2a.13529 |
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Locus | scaf5523 : 1113 ... 5565 : - |
To GenomeBrowser | scaf5523:1113..5565 |
Genes list of scaffold | scaf5523 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 13-3 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 13-1. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.13529.t1 | gi|751233951|ref|XP_011170685.1| | PREDICTED: uncharacterized protein LOC105203572 [Solenopsis invicta] | 0.0 |
Transcript
Transcript ID | aug_v2a.13529.t1 |
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Definition | - |
>aug_v2a.13529.t1 gaaccgccattaaaacgttgttgttcgtaagtcaaacctgttgaagtcattcgaacccaaacaccacaaagttggcgacg aggatatggattattaaaatgacggaaagtgtggcaagtggttcgcagtccgccgaagtccaaggaggaagttctacttc aagtagctctccgatggttagttatttcggtcgaatggacgcttttgacccgaaagtagaagagtggttgacgtatgtgg agcgtcttgagatgtttttcgtggtaaataatgttcccgacgataaaaaagcagccagtttacttaccttgatcggagga cggatgcatgcattattgaagagtttaacaacaccgactaaaccgacggagttgtcgtttaaggagattgtggagattat ggggcgacatttgacaccaaagccgatggtcatcgccgaaaggtacaagttccataaataccaccaagaagaaggtcagt caatccgagaattcttagctaagttgcaaaagttggccgaaacatgtgaattcggtggataccgagacgaagctctcaga gacagactagtgtgtggtataacttcccaaacaatccgaagaaaattgttaggtgaagcagatctaaccttgaagaaggc tgtagatatcgcagtaggaatggagttgactgataaggaaattactcagacttcggcggttcaacaagtgcataaagttc agcttcaggagtgttttagatgtggtaaacataatcattccccagacaagtgtttccataagctttcagaatgccatatt tgcaaacgaaagggacacataagtccaaaatgccctcagaaaatctctagtaaatcgccagcttccagcaaacctaaaca agccgaagccaaacaaaacaagagttttaagaaaaagaagaaaagttcaagaataaaatttgttgacactcaaggaagta gttctggaagtgaggtacctgaggatgaatcaaattcaagaatcaaatttgtgggcactcaaggaagtagttctgaaagt gaggtgccctaagatgaagattttagcttaaggggtgaatttccaagtgaatggcctatgttcgccataagtagcccctc aaggagaaaagctgacgaaattctggtaccagttaaaatcaatggtatttcctttaaaatggaactggacacaggagcat ctgttactgtgatcctagaagaaatgtgggagaaggagttaggatcagtgcccttagtggaggctggtgtgactctagta ctaaaaagttattctggtcatgctatacctgtagatggtgaaaccactgttcatgtccagtatcagacccaacaagtgaa tttgcccattgtggtcacttaaaggaaaggtcttgctcttatggggagagattggttgtcaaaacttaagttggactggc gtcaaattagtaacatccaacaagccaatccacccaaacctaaattggaagaaattgttcaacagttacccaagctgttt gatggtaaattaggcaccattaaaggatttacagctgaattgaaagtgaaagagaatgcaccaccacagtactttaagcc acgcactgtaccatttgcactcagagataaagttgaagcagagattcaacgtctggagaaggaaggagtgttaaataaag tggaaagttgtgattgggctactcccattgtacctgttctaaagccggatggaacagttagaatttgtggtgatttcaaa gtaactctatatcagtatttggatgtacctgagcaccccatgcctacttcagaagaactgtttacaaagttaaatggagg agagttgttcactaagttggacctaagtcatgcctaccaacaggtggttctggatgagaagtcacagccttatgtcacta ttacaactcacttaggactatatcgatacaccagacttccatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgcaacttatacaagactcttaagaa gtttgaagactctggagcaaagttcaagaagtccaaatgtgtcatcatgcagcccaagattgagtacttcgcatttgtgc tggaccgccacggcatccatccatcccctgcaaaggttcaagccatcctcgaggtacgtgatccacagaaccgaagtgag ctgcaatcatttcttggtctagttaattattaccgcaagtttattcctaacatgtcaacacttgtcagcccattgaatca attgctgtcaaaggacacaccttggtgttggagtcctgagtgcaaaggctcatttcaagcactcaaggacacccttgctt cgtcaagcatgttagctcactacagtccaaaattggaagttcagttggcagtagatgcgtcaccagtaggcctgggagcg gtaatttcacacatcactgaagatggaaccgaacgacctattgcttacgcttcaaggtcattaacgaaagctgaaaaaaa ctactcagtcattgagaaagaagctttggccatcatatttggcatacgcaagttccagcaatacttatatggccacaaat aggcaagtttcgtattcccggccgcactggggcgagttacttaaaaacccgccaaagtgaggctcatgcggggaagaaat gagtcaacaagagctgcagcaatggtgaagcatcactgttgtgcttttaactgcacaaatagcacccagaaacagaaaaa tgttgaaaaatacccggaactggcaaatgttagattttttccatttcctcaagacgacccaaataagtattatgctgcgg gaatgtcagaacgacagcggcgtttgcgatggattacagcctgtcgtttagacagtttaaatgttacaaggcataccaga atatgctcaattcatttcgaaggaggtcttggcccgactaaattgaatcctgttccatcaatatttgcattcccacaaca tcttcagagaaaacttccgaaaagtcgtgctgaccccgaggagagacgtcgaaggcagcgaaaggaaactcagccatcga agaataaaatgtttacgaaccaaagaaagcaagacgaaatgaaaccggagcaaatggatcatgggtcgaaagaacaatat tctggttttgaaggagctgataccccttttagtgaacctgtgtacgttgatgccgaggtccaaactaatttaacagcctc cgacatagatgtaatggctgattgcaaggaaaagttggaaaacaaaactcagctaaaaagggatctttttgttgaggata tttgcaaaaacgatcagacagtcaggttttacactggcattccatcactgggttgcttatttatggtgttcaacttttta aaaccaattgctgagaaaatgaaatattgggatggtaagaaaaagaccaagaaggaagcttatcaggttggtgaatgttg ttttcagatgggatttcacaccaatatatattcattattataagttacaatttttttcatgtgctgccttaaaaaatgga gttttttagtacctcgcccagtcttctcaattggaaataatttaaatgccttactatttatatctgcaagtcaaaattaa aattgtgcagtctaccatagatggcttcatttccaagggaaaagtcttttcacttgaaataaccttttatgcaagcacct cataaagaatttggttgtacaaatacacttgggtaaaaaagccttttcaaaccagtttacctttaaaataaataaaatgt tattgatgttaattgtaagttatttctacttaataggaagaaagagaccgaaagaagccaggccccaaaagacaggtgcc attgtttgcagagtttcttttagtccttgtgaggctcagacttggtttgttggttggtcacctggctgatatttattcac tttccaagggatctgtgtccaaaatcttcacgacctggataaccatgctttaccatgtgtttaaagacattttgatagcg tggcctcaaaggcagcaagtaaagagacatttaccaaagagttttgccaagtttcctcgaacaagagtcattattgactg tactgaaataaaaattcaaaaacccactggcccatctgcacagaaagttacatggagcaattataaaagctcaaacactt ttaaacttttagtaggaatttctcctaccggtgcttttacatttgtctcacaactgtggtcaggaggtgcttctgacagg cacactactatgaagtcaggtttgattgacaaattggaacccaatgatgattgtatggcagacaggggtttcaatatcag agatttagtcgcaaagagaagagctactttaaacatccctcctttttccaagg |
Protein
Protein ID | aug_v2a.13529.t1 |
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Definition | - |
>aug_v2a.13529.t1 MTESVASGSQSAEVQGGSSTSSSSPMVSYFGRMDAFDPKVEEWLTYVERLEMFFVVNNVPDDKKAASLLTLIGGRMHALL KSLTTPTKPTELSFKEIVEIMGRHLTPKPMVIAERYKFHKYHQEEGQSIREFLAKLQKLAETCEFGGYRDEALRDRLVCG ITSQTIRRKLLGEADLTLKKAVDIAVGMELTDKEITQTSAVQQVHKVQLQECFRCGKHNHSPDKCFHKLSECHICKRKGH ISPKCPQKISSKSPASSKPKQAEAKQNKSFKKKKKSSRIKFVDTQGSSSGSEVPEDESNSRIKFVGTQGSSSESTIKGFT AELKVKENAPPQYFKPRTVPFALRDKVEAEIQRLEKEGVLNKVESCDWATPIVPVLKPDGTVRICGDFKVTLYQYLDVPE HPMPTSEELFTKLNGGELFTKLDLSHAYQQPKIEYFAFVLDRHGIHPSPAKVQAILERKLPKSRADPEERRRRQRKETQP SKNKMFTNQRKQDEMKPEQMDHGSKEQYSGFEGADTPFSEPVYVDAEVQTNLTASDIDVMADCKEKLENKTQLKRDLFVE DICKNDQTVRFYTGIPSLGCLFMVFNFLKPIAEKMKYWDGKKKTKKEAYQEERDRKKPGPKRQVPLFAEFLLVLVRLRLG LLVGHLADIYSLSKGSVSKIFTTWITMLYHVFKDILIAWPQRQQVKRHLPKSFAKFPRTRVIIDCTEIKIQKPTGPSAQK VTWSNYKSSNTFKLLVGISPTGAFTFVSQLWSGGASDRHTTMKSGLIDKLEPNDDCMADRGFNIRDLVAKRRATLNIPPF SK |