Gene
Gene Model ID | aug_v2a.13855 |
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Locus | scaf5713 : 56417 ... 61057 : - |
To GenomeBrowser | scaf5713:56417..61057 |
Genes list of scaffold | scaf5713 |
Manual annotation
Study field | Signal transduction |
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Gene name | Adi-APC |
Description | Best hit to XP_002161688 PREDICTED: similar to Apc protein [Hydra magnipapillata] with 2e-176 by a BLASTP search against NCBI nr. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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adenomatous polyposis coli protein | GO:0000281 GO:0000776 GO:0001822 GO:0001942 GO:0002020 GO:0005654 GO:0005813 GO:0005829 GO:0005881 GO:0005913 GO:0005923 GO:0005938 GO:0006921 GO:0006974 GO:0007026 GO:0007050 GO:0007094 GO:0007163 GO:0007409 GO:0008013 GO:0009798 GO:0009952 GO:0009953 GO:0009954 GO:0016328 GO:0019887 GO:0019901 GO:0030027 GO:0030335 GO:0030425 GO:0030858 GO:0030877 GO:0031016 GO:0031116 GO:0031122 GO:0031274 GO:0031965 GO:0032587 GO:0033077 GO:0034750 GO:0035019 GO:0035050 GO:0035239 GO:0035371 GO:0042483 GO:0043009 GO:0043025 GO:0043409 GO:0044295 GO:0044306 GO:0044336 GO:0044337 GO:0045202 GO:0045295 GO:0045296 GO:0045667 GO:0045670 GO:0045732 GO:0045736 GO:0045785 GO:0046716 GO:0048538 GO:0048598 GO:0051010 GO:0051781 GO:0051988 GO:0055123 GO:0060041 GO:0060770 GO:0070830 GO:0070852 GO:0090090 GO:0090263 GO:2000211 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
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aug_v2a.13855.t1 | gi|449669136|ref|XP_002161661.2| | PREDICTED: uncharacterized protein LOC100203938 isoform X1 [Hydra vulgaris] | 0.0 |
aug_v2a.13855.t1 | gi|676455884|ref|XP_009054150.1| | hypothetical protein LOTGIDRAFT_81378, partial [Lottia gigantea] | 0.0 |
aug_v2a.13855.t1 | gi|260803342|ref|XP_002596549.1| | hypothetical protein BRAFLDRAFT_153994 [Branchiostoma floridae] | 0.0 |
aug_v2a.13855.t1 | gi|704570507|ref|XP_010185311.1| | PREDICTED: adenomatous polyposis coli protein-like, partial [Mesitornis unicolor] | 0.0 |
aug_v2a.13855.t1 | gi|291237198|ref|XP_002738523.1| | PREDICTED: adenomatous polyposis coli protein [Saccoglossus kowalevskii] | 0.0 |
Transcript
Transcript ID | aug_v2a.13855.t1 |
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Definition | - |
>aug_v2a.13855.t1 ggcgacgagtcagcagcaagtcagaacagaggtatgaccagaagcgtaagccaatccagtctggaagcaatgtgctattc gcctcacgatgcactggaagggtttgagacatccagcgtggttagcttcgccagtacggctgcaacacatcacgacctgg acactcgcattgatatggtacagtcactgctctccatgttgggaactcacgataaagacgacatgtcaagaactctgttg gcaatgtcacacagtaaggacagttgcgcagctatgcggcaatctggttgcctgcctctcctcattgatcttctgcatgg taaggatttcacaaacatgaactctcgtcgcgaggcccgcgctcgtgcaggtctcgctctacataatattgttttctcga acgttgacgacagacgcggacgacgcgaggtgcgagttcttaggctcctggaaattgcgcgtgcgcactgcgacgctgta caattcaaaggttacccggtacacccttgcgcggaacgttggtatccgcccctgaggaatcatgggccaagtccagctgt agctgcgcttatgaagctatcgtttgaagaggatcatcgtaatgccatctgtgagctgggaggacttcaagccattgcgg aactccttcaaatcgaccatcaagtgaatgaacgctgcaaagatttttacagcacgagtctgagaaagtacgccggaatg acgctcacaaacctgacgtttggcaacactaaaaacaaaaacgtgctgtgcagtttccctgcagcgatcgacgccatcgt tgctcaactgcaaactatcgaagaagaagaaatcattcaagtctccgccagtgtgctgaggaatctctcctggagagctg aggaactatgtcgcaagactcttcgtgatgcgggtgccatcaatgctttactgtctgcggcccaagcagtgcacggggag cctgccttgaggacgaccctaagtgctctgtggaatctctccgcccattgctcagacaacaaagccgagatgtgtgcttc ccctggtgcattgaaattcctggtcaagtgtctcaattactccagtccgtcgggaaatatttctgtggtggaaagcagtg gaggtatattgaggaatctttcctctcatattgctgtgcgggccgattaccgcaagactctccgtgatggcggctgcttt caggtgctagtgtctcatctgcgctctcctagcctcagggttttgagtaacgtctgtggtgccttatggaacttgtccgc ccggtgcgtcgaggatcaggaagtactttgggagcttggagcggtgtcgctgctgaagtcattggtcaagtccaaaaaca aggccatctcacaagcttcagccgcagcgctgcgtaatttaatggcagtgaagcctggaagttcaacggacaacgagtcg gtttcttccagagcagctaggcactatcagagcatgcccgcgaatatgcgatcagccggttctcaagcaagaataaaaaa cgaaacggcaagattacagagtccaactatgggccaagccccagcttccaatcaaactctgccgatgcgccacgtctcca agcagaaacgcgatggtttggttcctcacaaagcaaccgaaggattttatccagttagtcaagcaaatctcgttccagtc accaggcaggacattgaggcggttgcagctcatcaaaagcatgcgtcgtcaagaaagaagacaggttccttgggctcgct ggcgcattccagctcaagttcaaatcacggcacccctcaggaaatcgaacccagtccttccctcactcgggccaggtcag atgttggacccagatctctttcgagcaagcagaaaaaggctaaggcccgcactgcggacagtaataccacgggaagcggt gcatctggggactgtaaacacgctgcgaattttaagtggcctcaaagcaatgattcactagccaagcatcgtcgccagac acaaaaagactcaatgtttttgacagggcagccaacggaaaaacgcaaccactgtcgatcatcaagtgatgggtgtgcag tcattccattgttgtctgactcgtacccattgcacgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttctaagagttccgaaaaaatttccgacaataagccg acggtggttaaaagcaggcgtgattccagtgactcacccatttcaagccccagtattcgccgggttttcagaaagtcgtc tagccgagaacagaaaaagaatacggccgaatcaccagcagatcccagtaaaagaggtgttaaagtaacatcgctgtgat tattagaagaaattgtagctcaaagaatcaatagcggtaatgtccaatcagcaatatgattggttcattttgacctcgac aatgtccttggcaatcaagttctaggataactgctcgaattttgtttaacgcgaacaaaaacaatttcgtggagaaaagt cgtatgttggtttcctctgaagactgttttgttttgtcaagtccataccatattaaaaagatgagaccagtgttcttacg cacaggaggcttcataaaatcatatcttagttttcaatttaaagaatctgttacatctgtggccgagttttgtgaatgtt gggttaagaaagcatcaccggtaaatgttcgttgctgcaacgtatcttttaagaagacacaatctctgcgatactattta taccactggatttctttgaattattaatgaaatttataaaactgaagcacagagtataaatgagtatcgttttggtctta gttttgtgatgtggttataagtaaacgatgggtcacgtccaaaggaaatctatgtattaatatgtcgtaatgcttaggaa agataagttataaacaaatattgataatctcgtctgtaatgtgcaattctcgtttactgtaatgttagcgttggccgcgt catcttgagaaattcaagtatttgtattttaagaaagtatgaaaccagtcgatatttgaatgattgtggtgaataccatg tctattcggtccctactgtaagagacgggtacctggttttttcacttcagtttatggcccgaaggtcatgcagtgaagtg gaaaaacaaggtgccataactttattgaccgagaaaacgagattagtaagatgtttatgatatctcttgagaattagttc gagctggaaagcacaccacgaagttaagcggtccgtactttagaacacggactgctaaatcaaccaatatctgttatagc aaaaaagctgggtcattatgctttgggttgcaacaccaaatatacactttctcgctctcttggtgatatagtcctagctt ttaaaagtgtactgaattcattgtttctttcccataaaccaactgttggatgattcacaacagtgtacacctcacaaaat gtcttccgagagcacaagtagaacaccaaccaaacagtgtggaaattaaaaagacaactgaaaattcctctccattttat ttcttgcaattaaccatacttgtcattccctacctttggccagtttcttaatggatttacggaaagactaagaggaattt gacgattcatagattacgaattgaatcttttcgtttcgacagtgtattggggccaaatcaagtatccctttttttcttct tgtgcacagatcacacagtacttccaagtagaatattgaagtcatttgacaattggaaaacgaaacaatgtaactgtgaa aattctactccaggcaaaatttttgtctgcatcgctaaactaaataatacgcatatttatcacaatgactacaattttcg atgttttcgtacagttgtttgaaaaaaaaaagatgcgcagtgatgaaagggacttttagcatatttactgtccccttccg taaccccctttgttttcgttacaaggatcatgagagtgttcctgaacagctttcatttttaacaatattaaggatttcct ttaaagcggattttttgaagtcaccatgatgactaacgttttctcgttgggaaacagctgctgcgcaagagtggtcacga actcaggcccttcgattagagagtgcagcggattggcaatgaatgaatgagcttggacgatctgctcccctagaccaaca taatgcttgtttgaacgaagaatttccaaattcgtcaaagcttgttcagcctcaggagtggaagaaacaactcttctgcc a |
Protein
Protein ID | aug_v2a.13855.t1 |
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Definition | - |
>aug_v2a.13855.t1 MTRSVSQSSLEAMCYSPHDALEGFETSSVVSFASTAATHHDLDTRIDMVQSLLSMLGTHDKDDMSRTLLAMSHSKDSCAA MRQSGCLPLLIDLLHGKDFTNMNSRREARARAGLALHNIVFSNVDDRRGRREVRVLRLLEIARAHCDAVQFKGYPVHPCA ERWYPPLRNHGPSPAVAALMKLSFEEDHRNAICELGGLQAIAELLQIDHQVNERCKDFYSTSLRKYAGMTLTNLTFGNTK NKNVLCSFPAAIDAIVAQLQTIEEEEIIQVSASVLRNLSWRAEELCRKTLRDAGAINALLSAAQAVHGEPALRTTLSALW NLSAHCSDNKAEMCASPGALKFLVKCLNYSSPSGNISVVESSGGILRNLSSHIAVRADYRKTLRDGGCFQVLVSHLRSPS LRVLSNVCGALWNLSARCVEDQEVLWELGAVSLLKSLVKSKNKAISQASAAALRNLMAVKPGSSTDNESVSSRAARHYQS MPANMRSAGSQARIKNETARLQSPTMGQAPASNQTLPMRHVSKQKRDGLVPHKATEGFYPVSQANLVPVTRQDIEAVAAH QKHASSRKKTGSLGSLAHSSSSSNHGTPQEIEPSPSLTRARSDVGPRSLSSKQKKAKARTADSNTTGSGASGDCKHAANF KWPQSNDSLAKHRRQTQKDSMFLTGQPTEKRNHCRSSSDGCAVIPLLSDSYPLHSSEKISDNKPTVVKSRRDSSDSPISS PSIRRVFRKSSSREQKKNTAESPADPSKRGVKVTSL* |