Gene
Gene Model ID | aug_v2a.14477 |
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Locus | scaf6061 : 9006 ... 12215 : + |
To GenomeBrowser | scaf6061:9006..12215 |
Genes list of scaffold | scaf6061 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 20-21 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 20-1. This gene model contains Rapsyn_N, TPR_1 and TPR_2 domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.14477.t1 |
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Definition | - |
>aug_v2a.14477.t1 gtcgtcaaagcagtgtttactccactgtgcaacaatcgattgtgtgtgtccttaatgatcaactcaacaccatgatggct tcttgatttagtagactgttttgaattcttcctctacaccgcataaggccaccgtcatctaggtaagggttgaactgtcg caagagaggcggctcgggtaattttcttgccgccaccaagttgcatatttcgtccggaaaggattggtactgtatggttc caccataatttcagctccccggtaattgaatgtgagcaatttcaaaagccaaagttgaagctacacgtgatccagaaact gtagtcgactgttgaaaaccagagggcgcaaattcgtttgcgttcgtaccagaggatgtagttttgctggcattaatcgt agttggaacagtcggtattcctgcgttgctatccgattccagtttttctgcttctattccgtccacagcacaattctcta taatttcctcgtcgaacgttttgaccaattttaacttctcgtttagtgaagaagcaataaaatccaggcgttgtttgttg atcggttcatcttcaagaagatcattcgcttccttggatagtttcgtcataacacttcgatttcaccacttttggcgcga cttcgcgctagtttttcggccattttgtcttctcgagtctcagggtatcagtgccccacgttgggcgccatttcataagt catatcgtaaaccaaaaccataaatcatatcgaacatcaaaccgaaccataatctatcgtcgttttttctactaaaagat gaaatcatatgtgattgaaactctgcaccgataattaatacacgcggtgaggaaatcacgtgatataaatgctcctaatt cttacacaccaaaaggttttctaatgtacggaagaaaacagcaataatgagtccaaaaacagaagctcaatctggaattg ctaccattaaaacacattaatgaccgatgctggaacattgactgaaacaaaaaatccatgacatctgtttacaacatttc ctctacgaaatgttcctcgagctgttacgcatctactttctttttttattttgttatatttttcactaatcaattattcc tttacatgtttttcttttttaaaagaaatggataaccaacacagaaatgtatatattgaacaaggtagagatttctagtt aatggatgacattaaaaaaaccgttgagtacctcgaaaaacatttgacgactgcaacacaaaatggtgatcggggccaag aaatagcagcctatggaaatctcggtaatgcttaccagttactgggtaactatcgaaaagccattaagtatcataaaaaa catttgaaaattgcaatagaaattggtgatcgggacggagaaggacaaacctatggaaatctcggtaatgcttacgactc actgggtgactttcgaaaagccattgagtgtcatgaaaaacatttgaaaattgcaaaagaaattggtgatcgggaaggag aaggaagggcttatcatggctttggtaagcaatactttcatcttggacagtttgacattgcggcggataagtttgtttcc gctttgcatgcttttaatactttgagatctctattgaagtctaaagataattggaaaataacattccgtgagctgtatga ggcgacgtacacttacttgtggaggtcattcctaagagttggaaagatcaacgaagctttgtttgctgctgatcaaggac gagcgcaaactttgtgtgacaatctggtgattcaatatggactcgcttcgtcgttatcatgcgccacatttgactctaag gagagaacaatgtgcctctttacagagctttcttcacaaatcatctttctcgggcttgaaggactcacgatcaacatctg gtttttgaggaggggacagaaagttgaatttcgacaagggaagctagaggctgatatcacagagaaagatcccatacgca ccttactacaagcagctttaaggaaaatcaaagctgaagatgaagtgagatgcgaagatcgcacatttgacgaattagac aatgaatgcccgtctagcagagaagtgtgcgaagaagtggaaaagtcatgtcagtcttcagagaatccttttaggccatt ttatgatgcagttattgctcgaattgttgacttgcttggatctcaatacggcgagttagtcatagtttcggacggtgtgc tgtgctttacgccatgggctgcaattgttgaatcaattaggattcgcactgttccttctcttaccagttatcaattgatc tcaagtgcacccgagggccatcacaggaagactgggacgcttttggtcggaaatccgtgcttaaacgacttgaagaaacc tccacccgacttaccatgtgctcaagaggaagtagaaatgattgcattaattcttaacaccagacctctaacagggagag aggcatcgaaagccgaagtgataaaacggatgtcttcagttggtttaattcacattgctgcccacggaaacaagacaact ggagaaattgccctgtctccaaaccctggatggacctccaagtttcctcaaaaaacggattacatcttgaaaatgtccga cgtactagcagccaatcttcgagctcgtctagtggtcttgagttgctgtcacagtggacgaggcagaatcttgaagggtg agggtgtggtcggtatcgcacgtgccttcttggcagctggtgctcgttctgtgttgatatccctgtgggcaatagacgac gaagctaccatggtgttcatgaaaagcttctaccaacacctgaaggaaggaaaaaccgcaagtgctgctgttcaccaaac gatgaaatcccttcgtgaatctgagaagttttctgagatgaggtactgggctccattccaacttatcggagatgacgtca aaatcgagttcgaggcggatgatgacgtcaaaaattagagtttttttgcgtctgtttttgtcaacataattttcagcgta agaggtttctttattacttccaccattactacttttcaggactactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgaataagagataaagttaactactataaaaata tacatcttgt |
Protein
Protein ID | aug_v2a.14477.t1 |
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Definition | - |
>aug_v2a.14477.t1 MDDIKKTVEYLEKHLTTATQNGDRGQEIAAYGNLGNAYQLLGNYRKAIKYHKKHLKIAIEIGDRDGEGQTYGNLGNAYDS LGDFRKAIECHEKHLKIAKEIGDREGEGRAYHGFGKQYFHLGQFDIAADKFVSALHAFNTLRSLLKSKDNWKITFRELYE ATYTYLWRSFLRVGKINEALFAADQGRAQTLCDNLVIQYGLASSLSCATFDSKERTMCLFTELSSQIIFLGLEGLTINIW FLRRGQKVEFRQGKLEADITEKDPIRTLLQAALRKIKAEDEVRCEDRTFDELDNECPSSREVCEEVEKSCQSSENPFRPF YDAVIARIVDLLGSQYGELVIVSDGVLCFTPWAAIVESIRIRTVPSLTSYQLISSAPEGHHRKTGTLLVGNPCLNDLKKP PPDLPCAQEEVEMIALILNTRPLTGREASKAEVIKRMSSVGLIHIAAHGNKTTGEIALSPNPGWTSKFPQKTDYILKMSD VLAANLRARLVVLSCCHSGRGRILKGEGVVGIARAFLAAGARSVLISLWAIDDEATMVFMKSFYQHLKEGKTASAAVHQT MKSLRESEKFSEMRYWAPFQLIGDDVKIEFEADDDVKN* |